RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
BRCA1-217ENST00000487825 OCSTAMPQ9BR26 566 aa9.84□□□□□ -0.83
BRCA1-217ENST00000487825 ZIC2O95409 532 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-217ENST00000487825 ITPKCQ96DU7 683 aa9.83□□□□□ -0.84
BRCA1-217ENST00000487825 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-217ENST00000487825 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
BRCA1-217ENST00000487825 MAP4K5Q9Y4K4 846 aa9.83□□□□□ -0.84
BRCA1-217ENST00000487825 ADAM32Q8TC27 787 aa9.82□□□□□ -0.84
BRCA1-217ENST00000487825 SLC10A4Q96EP9 437 aa9.82□□□□□ -0.84
BRCA1-217ENST00000487825 SENP2Q9HC62 589 aa9.82□□□□□ -0.84
BRCA1-217ENST00000487825 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-217ENST00000487825 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
BRCA1-217ENST00000487825 SNRKQ9NRH2 765 aa9.8□□□□□ -0.84
BRCA1-217ENST00000487825 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
BRCA1-217ENST00000487825 DCAF1Q9Y4B6 1507 aa9.79□□□□□ -0.84
BRCA1-217ENST00000487825 CCDC116Q8IYX3 515 aa9.79□□□□□ -0.84
BRCA1-217ENST00000487825 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
BRCA1-217ENST00000487825 KCTD15Q96SI1 283 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-217ENST00000487825 KIFC2Q96AC6 838 aa9.78□□□□□ -0.84
BRCA1-217ENST00000487825 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
BRCA1-217ENST00000487825 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
BRCA1-217ENST00000487825 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
BRCA1-217ENST00000487825 MTMR14Q8NCE2 650 aa9.77□□□□□ -0.85
BRCA1-217ENST00000487825 PURBQ96QR8 312 aaKnown RBP9.77□□□□□ -0.85
BRCA1-217ENST00000487825 SCARF1Q14162 830 aa9.76□□□□□ -0.85
BRCA1-217ENST00000487825 CDV3Q9UKY7 258 aaKnown RBP9.76□□□□□ -0.85
BRCA1-217ENST00000487825 RAB15P59190 212 aa9.75□□□□□ -0.85
BRCA1-217ENST00000487825 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
BRCA1-217ENST00000487825 PPP1R26Q5T8A7 1209 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-217ENST00000487825 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
BRCA1-217ENST00000487825 ZBBXA8MT70 800 aa9.74□□□□□ -0.85
BRCA1-217ENST00000487825 THOC2Q8NI27 1593 aaKnown RBP9.73□□□□□ -0.85
BRCA1-217ENST00000487825 FBXO45P0C2W1 286 aa9.73□□□□□ -0.85
BRCA1-217ENST00000487825 INTS6LQ5JSJ4 861 aaKnown RBP9.73□□□□□ -0.85
BRCA1-217ENST00000487825 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
BRCA1-217ENST00000487825 MEIOBQ8N635 442 aa9.72□□□□□ -0.85
BRCA1-217ENST00000487825 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
BRCA1-217ENST00000487825 PCDHB9Q9Y5E1 797 aa9.72□□□□□ -0.85
BRCA1-217ENST00000487825 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
BRCA1-217ENST00000487825 ZCCHC6Q5VYS8 1495 aaKnown RBP9.72□□□□□ -0.85
BRCA1-217ENST00000487825 UPP2O95045 317 aa9.71□□□□□ -0.86
BRCA1-217ENST00000487825 CBLBQ13191 982 aa9.71□□□□□ -0.86
BRCA1-217ENST00000487825 BMP2P12643 396 aa9.7□□□□□ -0.86
BRCA1-217ENST00000487825 DHX9Q08211 1270 aaKnown RBP9.7□□□□□ -0.86
BRCA1-217ENST00000487825 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
BRCA1-217ENST00000487825 TMPRSS4Q9NRS4 437 aa9.7□□□□□ -0.86
BRCA1-217ENST00000487825 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
BRCA1-217ENST00000487825 APBB1O00213 710 aa9.69□□□□□ -0.86
BRCA1-217ENST00000487825 GPR37L1O60883 481 aa9.69□□□□□ -0.86
BRCA1-217ENST00000487825 SOCS7O14512 581 aa9.68□□□□□ -0.86
BRCA1-217ENST00000487825 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
BRCA1-217ENST00000487825 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
BRCA1-217ENST00000487825 NR1H3Q13133 447 aa9.67□□□□□ -0.86
BRCA1-217ENST00000487825 TSEN34Q9BSV6 310 aaKnown RBP9.67□□□□□ -0.86
BRCA1-217ENST00000487825 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
BRCA1-217ENST00000487825 ESPNB1AK53 854 aa9.66□□□□□ -0.86
BRCA1-217ENST00000487825 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-217ENST00000487825 WFS1O76024 890 aa9.66□□□□□ -0.86
BRCA1-217ENST00000487825 TERTO14746 1132 aaKnown RBP9.65□□□□□ -0.86
BRCA1-217ENST00000487825 MAN1A2O60476 641 aa9.65□□□□□ -0.86
BRCA1-217ENST00000487825 NFX1Q12986 1120 aaKnown RBP9.65□□□□□ -0.86
BRCA1-217ENST00000487825 Q6ZVU0 165 aa9.65□□□□□ -0.86
BRCA1-217ENST00000487825 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-217ENST00000487825 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
BRCA1-217ENST00000487825 VEGFBP49765 207 aa9.63□□□□□ -0.87
BRCA1-217ENST00000487825 RELBQ01201 579 aa9.63□□□□□ -0.87
BRCA1-217ENST00000487825 LCE2AQ5TA79 106 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-217ENST00000487825 PRM3Q9NNZ6 103 aa9.63□□□□□ -0.87
BRCA1-217ENST00000487825 NXF1Q9UBU9 619 aaKnown RBP9.63□□□□□ -0.87
BRCA1-217ENST00000487825 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
BRCA1-217ENST00000487825 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
BRCA1-217ENST00000487825 ZNF330Q9Y3S2 320 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-217ENST00000487825 SOS2Q07890 1332 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-217ENST00000487825 NESP48681 1621 aa9.61□□□□□ -0.87
BRCA1-217ENST00000487825 ADD1P35611 737 aaKnown RBP9.61□□□□□ -0.87
BRCA1-217ENST00000487825 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
BRCA1-217ENST00000487825 FIGNL2A6NMB9 653 aa9.6□□□□□ -0.87
BRCA1-217ENST00000487825 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
BRCA1-217ENST00000487825 LILRA1O75019 489 aa9.6□□□□□ -0.87
BRCA1-217ENST00000487825 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-217ENST00000487825 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
BRCA1-217ENST00000487825 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
BRCA1-217ENST00000487825 KIF21AQ7Z4S6 1674 aa9.59□□□□□ -0.87
BRCA1-217ENST00000487825 SPINT1O43278 529 aa9.59□□□□□ -0.87
BRCA1-217ENST00000487825 ABL2P42684 1182 aa9.59□□□□□ -0.87
BRCA1-217ENST00000487825 MCM6Q14566 821 aa9.59□□□□□ -0.87
BRCA1-217ENST00000487825 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
BRCA1-217ENST00000487825 INSM2Q96T92 566 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-217ENST00000487825 ADH1AP07327 375 aa9.58□□□□□ -0.88
BRCA1-217ENST00000487825 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-217ENST00000487825 IRF5Q13568 498 aa9.58□□□□□ -0.88
BRCA1-217ENST00000487825 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
BRCA1-217ENST00000487825 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-217ENST00000487825 CTSOP43234 321 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-217ENST00000487825 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
BRCA1-217ENST00000487825 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
BRCA1-217ENST00000487825 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-217ENST00000487825 SMARCA2P51531 1590 aa9.55□□□□□ -0.88
BRCA1-217ENST00000487825 PTGIRP43119 386 aa9.55□□□□□ -0.88
BRCA1-217ENST00000487825 VAC14Q08AM6 782 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms