RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 NME9Q86XW9 330 aa17.53■□□□□ 0.4
SREBF1-215ENST00000487401 CAMKK2Q96RR4 588 aa17.52■□□□□ 0.4
SREBF1-215ENST00000487401 CDCA7Q9BWT1 371 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-215ENST00000487401 DISP2A7MBM2 1401 aa17.51■□□□□ 0.39
SREBF1-215ENST00000487401 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
SREBF1-215ENST00000487401 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
SREBF1-215ENST00000487401 R3HDM1Q15032 1099 aaKnown RBP17.5■□□□□ 0.39
SREBF1-215ENST00000487401 TESK2Q96S53 571 aa17.5■□□□□ 0.39
SREBF1-215ENST00000487401 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
SREBF1-215ENST00000487401 PARD3Q8TEW0 1356 aa17.48■□□□□ 0.39
SREBF1-215ENST00000487401 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
SREBF1-215ENST00000487401 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
SREBF1-215ENST00000487401 CD163L1Q9NR16 1453 aa17.46■□□□□ 0.39
SREBF1-215ENST00000487401 A0A1W2PP64 1363 aa17.46■□□□□ 0.39
SREBF1-215ENST00000487401 EXOC5O00471 708 aa17.46■□□□□ 0.39
SREBF1-215ENST00000487401 NBPF14Q5TI25 921 aa17.46■□□□□ 0.39
SREBF1-215ENST00000487401 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
SREBF1-215ENST00000487401 NINLQ9Y2I6 1382 aa17.45■□□□□ 0.38
SREBF1-215ENST00000487401 TMF1P82094 1093 aa17.45■□□□□ 0.38
SREBF1-215ENST00000487401 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
SREBF1-215ENST00000487401 OVOS2A0A0G2JMS6 1433 aa17.45■□□□□ 0.38
SREBF1-215ENST00000487401 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
SREBF1-215ENST00000487401 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
SREBF1-215ENST00000487401 CCDC7Q96M83 1385 aa17.44■□□□□ 0.38
SREBF1-215ENST00000487401 MARCH10Q8NA82 808 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-215ENST00000487401 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
SREBF1-215ENST00000487401 COG3Q96JB2 828 aa17.43■□□□□ 0.38
SREBF1-215ENST00000487401 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-215ENST00000487401 NFAT5O94916 1531 aa17.42■□□□□ 0.38
SREBF1-215ENST00000487401 CDCA8Q53HL2 280 aa17.42■□□□□ 0.38
SREBF1-215ENST00000487401 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
SREBF1-215ENST00000487401 USP47Q96K76 1375 aa17.41■□□□□ 0.38
SREBF1-215ENST00000487401 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
SREBF1-215ENST00000487401 ERBB3P21860 1342 aa17.41■□□□□ 0.38
SREBF1-215ENST00000487401 PLSCR1O15162 318 aa17.4■□□□□ 0.38
SREBF1-215ENST00000487401 IP6K1Q92551 441 aa17.4■□□□□ 0.38
SREBF1-215ENST00000487401 IL2RBP14784 551 aa17.39■□□□□ 0.37
SREBF1-215ENST00000487401 AMPHP49418 695 aa17.38■□□□□ 0.37
SREBF1-215ENST00000487401 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-215ENST00000487401 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
SREBF1-215ENST00000487401 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
SREBF1-215ENST00000487401 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
SREBF1-215ENST00000487401 COL18A1P39060 1754 aa17.37■□□□□ 0.37
SREBF1-215ENST00000487401 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
SREBF1-215ENST00000487401 ABCC6O95255 1503 aa17.37■□□□□ 0.37
SREBF1-215ENST00000487401 BCL9O00512 1426 aa17.36■□□□□ 0.37
SREBF1-215ENST00000487401 PARP4Q9UKK3 1724 aaKnown RBP17.35■□□□□ 0.37
SREBF1-215ENST00000487401 FBLN1P23142 703 aa17.34■□□□□ 0.37
SREBF1-215ENST00000487401 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
SREBF1-215ENST00000487401 MON2Q7Z3U7 1717 aa17.34■□□□□ 0.37
SREBF1-215ENST00000487401 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
SREBF1-215ENST00000487401 TNS1Q9HBL0 1735 aaKnown RBP17.34■□□□□ 0.37
SREBF1-215ENST00000487401 FYB1O15117 783 aa17.33■□□□□ 0.36
SREBF1-215ENST00000487401 HOXC9P31274 260 aa17.33■□□□□ 0.36
SREBF1-215ENST00000487401 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
SREBF1-215ENST00000487401 TNS2Q63HR2 1409 aa17.32■□□□□ 0.36
SREBF1-215ENST00000487401 KCNQ2O43526 872 aa17.32■□□□□ 0.36
SREBF1-215ENST00000487401 PROM2Q8N271 834 aa17.31■□□□□ 0.36
SREBF1-215ENST00000487401 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
SREBF1-215ENST00000487401 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
SREBF1-215ENST00000487401 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
SREBF1-215ENST00000487401 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
SREBF1-215ENST00000487401 SPON1Q9HCB6 807 aa17.3■□□□□ 0.36
SREBF1-215ENST00000487401 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-215ENST00000487401 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-215ENST00000487401 STK32BQ9NY57 414 aa17.28■□□□□ 0.36
SREBF1-215ENST00000487401 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-215ENST00000487401 LRP5O75197 1615 aa17.28■□□□□ 0.36
SREBF1-215ENST00000487401 PEAK1Q9H792 1746 aa17.27■□□□□ 0.36
SREBF1-215ENST00000487401 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
SREBF1-215ENST00000487401 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
SREBF1-215ENST00000487401 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
SREBF1-215ENST00000487401 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
SREBF1-215ENST00000487401 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
SREBF1-215ENST00000487401 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
SREBF1-215ENST00000487401 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
SREBF1-215ENST00000487401 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
SREBF1-215ENST00000487401 EIF4G2P78344 907 aaKnown RBP eCLIP17.23■□□□□ 0.35
SREBF1-215ENST00000487401 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
SREBF1-215ENST00000487401 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
SREBF1-215ENST00000487401 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-215ENST00000487401 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
SREBF1-215ENST00000487401 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
SREBF1-215ENST00000487401 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
SREBF1-215ENST00000487401 ZBTB7AO95365 584 aa17.21■□□□□ 0.35
SREBF1-215ENST00000487401 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-215ENST00000487401 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
SREBF1-215ENST00000487401 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.34
SREBF1-215ENST00000487401 RREB1Q92766 1687 aa17.2■□□□□ 0.34
SREBF1-215ENST00000487401 INSRP06213 1382 aa17.2■□□□□ 0.34
SREBF1-215ENST00000487401 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-215ENST00000487401 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-215ENST00000487401 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
SREBF1-215ENST00000487401 FLT4P35916 1363 aa17.19■□□□□ 0.34
SREBF1-215ENST00000487401 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
SREBF1-215ENST00000487401 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-215ENST00000487401 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
SREBF1-215ENST00000487401 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
SREBF1-215ENST00000487401 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
SREBF1-215ENST00000487401 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms