RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-241ENST00000487169 HIP1O00291 1037 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
HDLBP-241ENST00000487169 TPM2P07951 284 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 MCM10Q7L590 875 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
HDLBP-241ENST00000487169 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 ATP2B1P20020 1258 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 MPHOSPH8Q99549 860 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 SDF4Q9BRK5 362 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 GNAT3A8MTJ3 354 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 NFKBIBQ15653 356 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
HDLBP-241ENST00000487169 IPO7O95373 1038 aaKnown RBP16.04■□□□□ 0.16
HDLBP-241ENST00000487169 RRP12Q5JTH9 1297 aaKnown RBP16.04■□□□□ 0.16
HDLBP-241ENST00000487169 SASS6Q6UVJ0 657 aa16.04■□□□□ 0.16
HDLBP-241ENST00000487169 IL1RAPL2Q9NP60 686 aa16.04■□□□□ 0.16
HDLBP-241ENST00000487169 CCAR2Q8N163 923 aaKnown RBP16.04■□□□□ 0.16
HDLBP-241ENST00000487169 PCMTD1Q96MG8 357 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-241ENST00000487169 CEP126Q9P2H0 1117 aa16.04■□□□□ 0.16
HDLBP-241ENST00000487169 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
HDLBP-241ENST00000487169 WASLO00401 505 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-241ENST00000487169 KDM4AO75164 1064 aa16.03■□□□□ 0.16
HDLBP-241ENST00000487169 XBP1P17861 261 aa16.03■□□□□ 0.16
HDLBP-241ENST00000487169 RABEP1Q15276 862 aa16.03■□□□□ 0.16
HDLBP-241ENST00000487169 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
HDLBP-241ENST00000487169 BACH2Q9BYV9 841 aa16.03■□□□□ 0.16
HDLBP-241ENST00000487169 PDCP20941 246 aa16.02■□□□□ 0.16
HDLBP-241ENST00000487169 MCM2P49736 904 aa16.02■□□□□ 0.15
HDLBP-241ENST00000487169 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.15
HDLBP-241ENST00000487169 CCDC43Q96MW1 224 aaKnown RBP16.02■□□□□ 0.15
HDLBP-241ENST00000487169 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.15
HDLBP-241ENST00000487169 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
HDLBP-241ENST00000487169 GNL3LQ9NVN8 582 aaKnown RBP16.01■□□□□ 0.15
HDLBP-241ENST00000487169 TTC39AQ5SRH9 613 aa16.01■□□□□ 0.15
HDLBP-241ENST00000487169 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
HDLBP-241ENST00000487169 CCDC85AQ96PX6 553 aaPredicted RBP16.01■□□□□ 0.15
HDLBP-241ENST00000487169 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
HDLBP-241ENST00000487169 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
HDLBP-241ENST00000487169 SSH1Q8WYL5 1049 aa16■□□□□ 0.15
HDLBP-241ENST00000487169 BRMS1Q9HCU9 246 aa16■□□□□ 0.15
HDLBP-241ENST00000487169 EXOC6BQ9Y2D4 811 aa16■□□□□ 0.15
HDLBP-241ENST00000487169 AACSQ86V21 672 aa16■□□□□ 0.15
HDLBP-241ENST00000487169 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
HDLBP-241ENST00000487169 FKBP4Q02790 459 aaKnown RBP eCLIP15.99■□□□□ 0.15
HDLBP-241ENST00000487169 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
HDLBP-241ENST00000487169 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
HDLBP-241ENST00000487169 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■■□□□ 11.8
HDLBP-241ENST00000487169 MAP4K4O95819 1239 aaPredicted RBP15.98■□□□□ 0.15
HDLBP-241ENST00000487169 ZNF592Q92610 1267 aa15.98■□□□□ 0.15
HDLBP-241ENST00000487169 GOLGA6L1Q8N7Z2 621 aa15.98■□□□□ 0.15
HDLBP-241ENST00000487169 RNF214Q8ND24 703 aa15.98■□□□□ 0.15
HDLBP-241ENST00000487169 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-241ENST00000487169 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
HDLBP-241ENST00000487169 FANCAO15360 1455 aa15.97■□□□□ 0.15
HDLBP-241ENST00000487169 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-241ENST00000487169 C14orf93Q9H972 538 aaKnown RBP15.97■□□□□ 0.15
HDLBP-241ENST00000487169 STARD3NLO95772 234 aa15.97■□□□□ 0.15
HDLBP-241ENST00000487169 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
HDLBP-241ENST00000487169 FIBPO43427 364 aa15.96■□□□□ 0.15
HDLBP-241ENST00000487169 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.15
HDLBP-241ENST00000487169 DHX29Q7Z478 1369 aaKnown RBP15.96■□□□□ 0.15
HDLBP-241ENST00000487169 NACAP1Q9BZK3 213 aa15.96■□□□□ 0.15
HDLBP-241ENST00000487169 HOMER1Q86YM7 354 aa15.96■□□□□ 0.15
HDLBP-241ENST00000487169 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
HDLBP-241ENST00000487169 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 CWC22Q9HCG8 908 aaKnown RBP15.95■□□□□ 0.14
HDLBP-241ENST00000487169 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 NOS1P29475 1434 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 KIF14Q15058 1648 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 AMOTQ4VCS5 1084 aa15.95■□□□□ 0.14
HDLBP-241ENST00000487169 TRAK2O60296 914 aa15.94■□□□□ 0.14
HDLBP-241ENST00000487169 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
HDLBP-241ENST00000487169 KINO60870 393 aaKnown RBP15.93■□□□□ 0.14
HDLBP-241ENST00000487169 PRPF40AO75400 957 aaKnown RBP15.93■□□□□ 0.14
HDLBP-241ENST00000487169 MBD3O95983 291 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 ATP2B2Q01814 1243 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 STK3Q13188 491 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
HDLBP-241ENST00000487169 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 BLOC1S2Q6QNY1 142 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 CWC27Q6UX04 472 aaKnown RBP15.93■□□□□ 0.14
HDLBP-241ENST00000487169 LARP1Q6PKG0 1096 aaKnown RBP15.93■□□□□ 0.14
HDLBP-241ENST00000487169 CEBPZQ03701 1054 aaKnown RBP15.93■□□□□ 0.14
HDLBP-241ENST00000487169 UBE2Q2Q8WVN8 375 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
HDLBP-241ENST00000487169 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
HDLBP-241ENST00000487169 F6X3S4 739 aa15.92■□□□□ 0.14
HDLBP-241ENST00000487169 PRM3Q9NNZ6 103 aa15.92■□□□□ 0.14
HDLBP-241ENST00000487169 ABCC11Q96J66 1382 aa15.92■□□□□ 0.14
HDLBP-241ENST00000487169 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
HDLBP-241ENST00000487169 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
HDLBP-241ENST00000487169 STK38Q15208 465 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms