RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CAMKK2Q96RR4 588 aa34.71■■■■□ 3.15
LIME1-206ENST00000487026 MON2Q7Z3U7 1717 aa34.71■■■■□ 3.15
LIME1-206ENST00000487026 WDR17Q8IZU2 1322 aa34.71■■■■□ 3.15
LIME1-206ENST00000487026 ST20-MTHFSA0A0A6YYL1 179 aa34.7■■■■□ 3.15
LIME1-206ENST00000487026 HDGFL2Q7Z4V5 671 aaPredicted RBP34.7■■■■□ 3.15
LIME1-206ENST00000487026 PARP4Q9UKK3 1724 aaKnown RBP34.67■■■■□ 3.14
LIME1-206ENST00000487026 NFAT5O94916 1531 aa34.67■■■■□ 3.14
LIME1-206ENST00000487026 CSB-PGBD3P0DP91 1061 aa34.67■■■■□ 3.14
LIME1-206ENST00000487026 TESK2Q96S53 571 aa34.67■■■■□ 3.14
LIME1-206ENST00000487026 RGPD5Q99666 1765 aa34.67■■■■□ 3.14
LIME1-206ENST00000487026 USP31Q70CQ4 1352 aa34.65■■■■□ 3.14
LIME1-206ENST00000487026 R3HDM1Q15032 1099 aaKnown RBP34.65■■■■□ 3.14
LIME1-206ENST00000487026 DDB1Q16531 1140 aa34.65■■■■□ 3.14
LIME1-206ENST00000487026 TERF2IPQ9NYB0 399 aa34.64■■■■□ 3.14
LIME1-206ENST00000487026 PUS7Q96PZ0 661 aaKnown RBP34.63■■■■□ 3.13
LIME1-206ENST00000487026 A0A1W2PP64 1363 aa34.62■■■■□ 3.13
LIME1-206ENST00000487026 CARD10Q9BWT7 1032 aa34.61■■■■□ 3.13
LIME1-206ENST00000487026 EDC4Q6P2E9 1401 aaKnown RBP34.59■■■■□ 3.13
LIME1-206ENST00000487026 LRRC37A3O60309 1634 aa34.58■■■■□ 3.13
LIME1-206ENST00000487026 OVOS2A0A0G2JMS6 1433 aa34.56■■■■□ 3.12
LIME1-206ENST00000487026 OVOS2A0A0J9YW53 1432 aa34.56■■■■□ 3.12
LIME1-206ENST00000487026 OVOS2Q6IE36 1432 aa34.56■■■■□ 3.12
LIME1-206ENST00000487026 MARCH10Q8NA82 808 aaPredicted RBP34.56■■■■□ 3.12
LIME1-206ENST00000487026 CDCA7Q9BWT1 371 aaPredicted RBP34.56■■■■□ 3.12
LIME1-206ENST00000487026 PARD3Q8TEW0 1356 aa34.54■■■■□ 3.12
LIME1-206ENST00000487026 C11orf95C9JLR9 678 aaPredicted RBP34.54■■■■□ 3.12
LIME1-206ENST00000487026 PEAK1Q9H792 1746 aa34.54■■■■□ 3.12
LIME1-206ENST00000487026 USP54Q70EL1 1684 aa34.53■■■■□ 3.12
LIME1-206ENST00000487026 PTF1AQ7RTS3 328 aa34.52■■■■□ 3.12
LIME1-206ENST00000487026 WNK3Q9BYP7 1800 aa34.51■■■■□ 3.12
LIME1-206ENST00000487026 NLRP2Q9NX02 1062 aa34.5■■■■□ 3.11
LIME1-206ENST00000487026 EXOC5O00471 708 aa34.49■■■■□ 3.11
LIME1-206ENST00000487026 SLC24A1O60721 1099 aa34.49■■■■□ 3.11
LIME1-206ENST00000487026 ABCC6O95255 1503 aa34.49■■■■□ 3.11
LIME1-206ENST00000487026 CCDC7Q96M83 1385 aa34.49■■■■□ 3.11
LIME1-206ENST00000487026 LRP5O75197 1615 aa34.48■■■■□ 3.11
LIME1-206ENST00000487026 ERBB3P21860 1342 aa34.48■■■■□ 3.11
LIME1-206ENST00000487026 USP47Q96K76 1375 aa34.48■■■■□ 3.11
LIME1-206ENST00000487026 LTN1O94822 1766 aa34.47■■■■□ 3.11
LIME1-206ENST00000487026 ANKRD24Q8TF21 1146 aa34.47■■■■□ 3.11
LIME1-206ENST00000487026 PCGF6Q9BYE7 350 aa34.47■■■■□ 3.11
LIME1-206ENST00000487026 NINLQ9Y2I6 1382 aa34.47■■■■□ 3.11
LIME1-206ENST00000487026 BCL11BQ9C0K0 894 aaPredicted RBP34.46■■■■□ 3.11
LIME1-206ENST00000487026 RREB1Q92766 1687 aa34.46■■■■□ 3.11
LIME1-206ENST00000487026 SBF2Q86WG5 1849 aa34.45■■■■□ 3.11
LIME1-206ENST00000487026 TMF1P82094 1093 aa34.44■■■■□ 3.1
LIME1-206ENST00000487026 NBPF14Q5TI25 921 aa34.44■■■■□ 3.1
LIME1-206ENST00000487026 FBLN1P23142 703 aa34.43■■■■□ 3.1
LIME1-206ENST00000487026 NUP188Q5SRE5 1749 aa34.43■■■■□ 3.1
LIME1-206ENST00000487026 COG3Q96JB2 828 aa34.42■■■■□ 3.1
LIME1-206ENST00000487026 PLSCR1O15162 318 aa34.4■■■■□ 3.1
LIME1-206ENST00000487026 IP6K1Q92551 441 aa34.39■■■■□ 3.1
LIME1-206ENST00000487026 LTV1Q96GA3 475 aaPredicted RBP34.39■■■■□ 3.1
LIME1-206ENST00000487026 BCL9O00512 1426 aa34.38■■■■□ 3.09
LIME1-206ENST00000487026 ANKRD36BQ8N2N9 1353 aa34.37■■■■□ 3.09
LIME1-206ENST00000487026 IL2RBP14784 551 aa34.37■■■■□ 3.09
LIME1-206ENST00000487026 TNS2Q63HR2 1409 aa34.35■■■■□ 3.09
LIME1-206ENST00000487026 KCNQ2O43526 872 aa34.34■■■■□ 3.09
LIME1-206ENST00000487026 PROM2Q8N271 834 aa34.34■■■■□ 3.09
LIME1-206ENST00000487026 MAP3K19Q56UN5 1328 aa34.33■■■■□ 3.09
LIME1-206ENST00000487026 ACSBG1Q96GR2 724 aa34.32■■■■□ 3.08
LIME1-206ENST00000487026 GGNBP2Q9H3C7 697 aa34.32■■■■□ 3.08
LIME1-206ENST00000487026 TIMELESSQ9UNS1 1208 aa34.32■■■■□ 3.08
LIME1-206ENST00000487026 FYB1O15117 783 aa34.31■■■■□ 3.08
LIME1-206ENST00000487026 AMPHP49418 695 aa34.31■■■■□ 3.08
LIME1-206ENST00000487026 HOXC9P31274 260 aa34.29■■■■□ 3.08
LIME1-206ENST00000487026 CDCA8Q53HL2 280 aa34.28■■■■□ 3.08
LIME1-206ENST00000487026 ANO8Q9HCE9 1232 aaPredicted RBP34.28■■■■□ 3.08
LIME1-206ENST00000487026 RGPD3A6NKT7 1758 aaPredicted RBP34.26■■■■□ 3.08
LIME1-206ENST00000487026 RGPD4Q7Z3J3 1758 aa34.26■■■■□ 3.08
LIME1-206ENST00000487026 RRS1Q15050 365 aaKnown RBP34.26■■■■□ 3.08
LIME1-206ENST00000487026 CLSPNQ9HAW4 1339 aa34.26■■■■□ 3.07
LIME1-206ENST00000487026 TXNRD1Q16881 649 aa34.24■■■■□ 3.07
LIME1-206ENST00000487026 DDX54Q8TDD1 881 aaKnown RBP34.22■■■■□ 3.07
LIME1-206ENST00000487026 CARD14Q9BXL6 1004 aa34.2■■■■□ 3.07
LIME1-206ENST00000487026 NHSQ6T4R5 1651 aa34.17■■■■□ 3.06
LIME1-206ENST00000487026 PDGFDQ9GZP0 370 aaPredicted RBP34.17■■■■□ 3.06
LIME1-206ENST00000487026 SPON1Q9HCB6 807 aa34.17■■■■□ 3.06
LIME1-206ENST00000487026 FAM208AQ9UK61 1670 aaKnown RBP34.15■■■■□ 3.06
LIME1-206ENST00000487026 KAT6BQ8WYB5 2073 aa34.15■■■■□ 3.06
LIME1-206ENST00000487026 RGPD2P0DJD1 1756 aa34.15■■■■□ 3.06
LIME1-206ENST00000487026 RTL1A6NKG5 1358 aa34.13■■■■□ 3.05
LIME1-206ENST00000487026 NBPF6Q5VWK0 638 aa34.13■■■■□ 3.05
LIME1-206ENST00000487026 USHBP1Q8N6Y0 703 aa34.13■■■■□ 3.05
LIME1-206ENST00000487026 NBPF4Q96M43 638 aa34.13■■■■□ 3.05
LIME1-206ENST00000487026 STK32BQ9NY57 414 aa34.13■■■■□ 3.05
LIME1-206ENST00000487026 NSD3Q9BZ95 1437 aa34.12■■■■□ 3.05
LIME1-206ENST00000487026 HSP90AB2PQ58FF8 381 aa34.11■■■■□ 3.05
LIME1-206ENST00000487026 POLR3GLQ9BT43 218 aa34.11■■■■□ 3.05
LIME1-206ENST00000487026 MYOM1P52179 1685 aa34.11■■■■□ 3.05
LIME1-206ENST00000487026 KIF20BQ96Q89 1820 aa34.1■■■■□ 3.05
LIME1-206ENST00000487026 SLC15A2Q16348 729 aa34.1■■■■□ 3.05
LIME1-206ENST00000487026 CCER1Q8TC90 406 aaPredicted RBP34.1■■■■□ 3.05
LIME1-206ENST00000487026 PPP1R1BQ9UD71 204 aaPredicted RBP34.1■■■■□ 3.05
LIME1-206ENST00000487026 ZCRB1Q8TBF4 217 aaKnown RBP34.09■■■■□ 3.05
LIME1-206ENST00000487026 ZBTB7AO95365 584 aa34.08■■■■□ 3.05
LIME1-206ENST00000487026 BTAF1O14981 1849 aa34.07■■■■□ 3.04
LIME1-206ENST00000487026 MEGF6O75095 1541 aa34.07■■■■□ 3.04
LIME1-206ENST00000487026 SYTL4Q96C24 671 aaPredicted RBP34.05■■■■□ 3.04
LIME1-206ENST00000487026 CASZ1Q86V15 1759 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms