RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 RGPD5Q99666 1765 aa28.07■■■□□ 2.08
CHRD-216ENST00000486066 SRPK2P78362 688 aaKnown RBP28.07■■■□□ 2.08
CHRD-216ENST00000486066 BCL11BQ9C0K0 894 aaPredicted RBP28.07■■■□□ 2.08
CHRD-216ENST00000486066 AXIN2Q9Y2T1 843 aa28.06■■■□□ 2.08
CHRD-216ENST00000486066 DDB1Q16531 1140 aa28.05■■■□□ 2.08
CHRD-216ENST00000486066 WDR17Q8IZU2 1322 aa28.05■■■□□ 2.08
CHRD-216ENST00000486066 MYOM1P52179 1685 aa28.04■■■□□ 2.08
CHRD-216ENST00000486066 CPSF1Q10570 1443 aaKnown RBP28.04■■■□□ 2.08
CHRD-216ENST00000486066 NLRP6P59044 892 aa28.04■■■□□ 2.08
CHRD-216ENST00000486066 MARCH10Q8NA82 808 aaPredicted RBP28.04■■■□□ 2.08
CHRD-216ENST00000486066 PDGFDQ9GZP0 370 aaPredicted RBP28.04■■■□□ 2.08
CHRD-216ENST00000486066 CABP1Q9NZU7 370 aa28.04■■■□□ 2.08
CHRD-216ENST00000486066 PPP1R1BQ9UD71 204 aaPredicted RBP28.04■■■□□ 2.08
CHRD-216ENST00000486066 PTGER2P43116 358 aa28■■■□□ 2.07
CHRD-216ENST00000486066 ARHGEF25Q86VW2 580 aa28■■■□□ 2.07
CHRD-216ENST00000486066 NFAT5O94916 1531 aa28■■■□□ 2.07
CHRD-216ENST00000486066 TRPM1Q7Z4N2 1603 aa28■■■□□ 2.07
CHRD-216ENST00000486066 TOM1L2Q6ZVM7 507 aa27.99■■■□□ 2.07
CHRD-216ENST00000486066 CDCA7Q9BWT1 371 aaPredicted RBP27.98■■■□□ 2.07
CHRD-216ENST00000486066 ABCC6O95255 1503 aa27.97■■■□□ 2.07
CHRD-216ENST00000486066 CARD10Q9BWT7 1032 aa27.95■■■□□ 2.06
CHRD-216ENST00000486066 NHSQ6T4R5 1651 aa27.94■■■□□ 2.06
CHRD-216ENST00000486066 PAPPAQ13219 1627 aa27.94■■■□□ 2.06
CHRD-216ENST00000486066 USP54Q70EL1 1684 aa27.94■■■□□ 2.06
CHRD-216ENST00000486066 TTC21BQ7Z4L5 1316 aa27.93■■■□□ 2.06
CHRD-216ENST00000486066 ZBTB7CA1YPR0 619 aa27.93■■■□□ 2.06
CHRD-216ENST00000486066 SGIP1Q9BQI5 828 aa27.92■■■□□ 2.06
CHRD-216ENST00000486066 TNS2Q63HR2 1409 aa27.92■■■□□ 2.06
CHRD-216ENST00000486066 TXNRD1Q16881 649 aa27.91■■■□□ 2.06
CHRD-216ENST00000486066 MON2Q7Z3U7 1717 aa27.9■■■□□ 2.06
CHRD-216ENST00000486066 ZBTB7AO95365 584 aa27.9■■■□□ 2.06
CHRD-216ENST00000486066 KCNH5Q8NCM2 988 aa27.89■■■□□ 2.06
CHRD-216ENST00000486066 GOLGB1Q14789 3259 aaKnown RBP27.89■■■□□ 2.05
CHRD-216ENST00000486066 DCAF8L1A6NGE4 600 aa27.88■■■□□ 2.05
CHRD-216ENST00000486066 SLC15A2Q16348 729 aa27.88■■■□□ 2.05
CHRD-216ENST00000486066 EVC2Q86UK5 1308 aa27.88■■■□□ 2.05
CHRD-216ENST00000486066 TTC21AQ8NDW8 1320 aa27.88■■■□□ 2.05
CHRD-216ENST00000486066 CCDC7Q96M83 1385 aa27.87■■■□□ 2.05
CHRD-216ENST00000486066 ZNF692Q9BU19 519 aaPredicted RBP27.87■■■□□ 2.05
CHRD-216ENST00000486066 CHD4Q14839 1912 aa27.86■■■□□ 2.05
CHRD-216ENST00000486066 SYT17Q9BSW7 474 aa27.83■■■□□ 2.05
CHRD-216ENST00000486066 STK32BQ9NY57 414 aa27.83■■■□□ 2.05
CHRD-216ENST00000486066 ATF5Q9Y2D1 282 aaPredicted RBP27.83■■■□□ 2.05
CHRD-216ENST00000486066 EXOC5O00471 708 aa27.82■■■□□ 2.04
CHRD-216ENST00000486066 ZNF784Q8NCA9 323 aaPredicted RBP27.82■■■□□ 2.04
CHRD-216ENST00000486066 L3MBTL2Q969R5 705 aa27.82■■■□□ 2.04
CHRD-216ENST00000486066 FHDC1Q9C0D6 1143 aaPredicted RBP27.82■■■□□ 2.04
CHRD-216ENST00000486066 MTFR1LQ9H019 292 aa27.82■■■□□ 2.04
CHRD-216ENST00000486066 BTAF1O14981 1849 aa27.82■■■□□ 2.04
CHRD-216ENST00000486066 USP31Q70CQ4 1352 aa27.82■■■□□ 2.04
CHRD-216ENST00000486066 MAP3K5Q99683 1374 aa27.81■■■□□ 2.04
CHRD-216ENST00000486066 COL24A1Q17RW2 1714 aa27.81■■■□□ 2.04
CHRD-216ENST00000486066 LTN1O94822 1766 aa27.8■■■□□ 2.04
CHRD-216ENST00000486066 CD163L1Q9NR16 1453 aa27.78■■■□□ 2.04
CHRD-216ENST00000486066 ERBB3P21860 1342 aa27.78■■■□□ 2.04
CHRD-216ENST00000486066 QSER1Q2KHR3 1735 aa27.78■■■□□ 2.04
CHRD-216ENST00000486066 CSB-PGBD3P0DP91 1061 aa27.77■■■□□ 2.04
CHRD-216ENST00000486066 KTN1Q86UP2 1357 aaKnown RBP27.76■■■□□ 2.03
CHRD-216ENST00000486066 SOX12O15370 315 aa27.76■■■□□ 2.03
CHRD-216ENST00000486066 SBNO2Q9Y2G9 1366 aa27.75■■■□□ 2.03
CHRD-216ENST00000486066 ROCK2O75116 1388 aaKnown RBP27.71■■■□□ 2.03
CHRD-216ENST00000486066 ZNF827Q17R98 1081 aa27.7■■■□□ 2.02
CHRD-216ENST00000486066 ACSBG1Q96GR2 724 aa27.69■■■□□ 2.02
CHRD-216ENST00000486066 LRRC4BQ9NT99 713 aa27.69■■■□□ 2.02
CHRD-216ENST00000486066 TUBGCP6Q96RT7 1819 aa27.69■■■□□ 2.02
CHRD-216ENST00000486066 ARXQ96QS3 562 aa27.68■■■□□ 2.02
CHRD-216ENST00000486066 IL2RBP14784 551 aa27.67■■■□□ 2.02
CHRD-216ENST00000486066 CEP350Q5VT06 3117 aa27.67■■■□□ 2.02
CHRD-216ENST00000486066 NME9Q86XW9 330 aa27.65■■■□□ 2.02
CHRD-216ENST00000486066 AKT1S1Q96B36 256 aa27.65■■■□□ 2.02
CHRD-216ENST00000486066 FAM208AQ9UK61 1670 aaKnown RBP27.65■■■□□ 2.02
CHRD-216ENST00000486066 KAT6BQ8WYB5 2073 aa27.64■■■□□ 2.02
CHRD-216ENST00000486066 SIN3AQ96ST3 1273 aa27.63■■■□□ 2.01
CHRD-216ENST00000486066 NLRP2Q9NX02 1062 aa27.63■■■□□ 2.01
CHRD-216ENST00000486066 LY75O60449 1722 aa27.62■■■□□ 2.01
CHRD-216ENST00000486066 SHANK3Q9BYB0 1731 aa27.62■■■□□ 2.01
CHRD-216ENST00000486066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.62■■■□□ 2.01
CHRD-216ENST00000486066 ANKRD24Q8TF21 1146 aa27.62■■■□□ 2.01
CHRD-216ENST00000486066 EDC4Q6P2E9 1401 aaKnown RBP27.6■■■□□ 2.01
CHRD-216ENST00000486066 C1QTNF8P60827 252 aa27.58■■■□□ 2.01
CHRD-216ENST00000486066 SLC16A10Q8TF71 515 aa27.58■■■□□ 2.01
CHRD-216ENST00000486066 SLC27A3Q5K4L6 730 aa27.57■■■□□ 2
CHRD-216ENST00000486066 PNPLA7Q6ZV29 1317 aa27.57■■■□□ 2
CHRD-216ENST00000486066 DOT1LQ8TEK3 1739 aa27.56■■■□□ 2
CHRD-216ENST00000486066 NSD2O96028 1365 aa27.56■■■□□ 2
CHRD-216ENST00000486066 A0A1W2PP64 1363 aa27.55■■■□□ 2
CHRD-216ENST00000486066 IP6K1Q92551 441 aa27.53■■■□□ 2
CHRD-216ENST00000486066 SLC12A5Q9H2X9 1139 aa27.53■■■□□ 2
CHRD-216ENST00000486066 RGPD2P0DJD1 1756 aa27.52■■■□□ 2
CHRD-216ENST00000486066 ANKRD36BQ8N2N9 1353 aa27.51■■□□□ 1.99
CHRD-216ENST00000486066 SENP3-EIF4A1A0A087X0R7 540 aa27.49■■□□□ 1.99
CHRD-216ENST00000486066 PUS7Q96PZ0 661 aaKnown RBP27.49■■□□□ 1.99
CHRD-216ENST00000486066 HDGFL2Q7Z4V5 671 aaPredicted RBP27.48■■□□□ 1.99
CHRD-216ENST00000486066 GPR162Q16538 588 aa27.46■■□□□ 1.99
CHRD-216ENST00000486066 MEGF6O75095 1541 aa27.46■■□□□ 1.99
CHRD-216ENST00000486066 NLGN2Q8NFZ4 835 aa27.45■■□□□ 1.98
CHRD-216ENST00000486066 DDX54Q8TDD1 881 aaKnown RBP27.45■■□□□ 1.98
CHRD-216ENST00000486066 TMC1Q8TDI8 760 aa27.45■■□□□ 1.98
CHRD-216ENST00000486066 KCNQ4P56696 695 aa27.44■■□□□ 1.98
CHRD-216ENST00000486066 NEUROD1Q13562 356 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms