RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
HMG20B-211ENST00000486028 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 NFAT5O94916 1531 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 SPATA31A1Q5TZJ5 1347 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 GLI3P10071 1580 aa17.15■□□□□ 0.34
HMG20B-211ENST00000486028 MYOM1P52179 1685 aa17.14■□□□□ 0.33
HMG20B-211ENST00000486028 A0A0G2JS52 829 aa17.14■□□□□ 0.33
HMG20B-211ENST00000486028 MYT1Q01538 1121 aa17.14■□□□□ 0.33
HMG20B-211ENST00000486028 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
HMG20B-211ENST00000486028 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
HMG20B-211ENST00000486028 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
HMG20B-211ENST00000486028 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-211ENST00000486028 CSB-PGBD3P0DP91 1061 aa17.12■□□□□ 0.33
HMG20B-211ENST00000486028 TCP11L2Q8N4U5 519 aa17.12■□□□□ 0.33
HMG20B-211ENST00000486028 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
HMG20B-211ENST00000486028 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
HMG20B-211ENST00000486028 AMPHP49418 695 aa17.1■□□□□ 0.33
HMG20B-211ENST00000486028 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
HMG20B-211ENST00000486028 IP6K1Q92551 441 aa17.1■□□□□ 0.33
HMG20B-211ENST00000486028 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
HMG20B-211ENST00000486028 COL18A1P39060 1754 aa17.1■□□□□ 0.33
HMG20B-211ENST00000486028 FBLN1P23142 703 aa17.09■□□□□ 0.33
HMG20B-211ENST00000486028 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
HMG20B-211ENST00000486028 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
HMG20B-211ENST00000486028 CRB1P82279 1406 aa17.09■□□□□ 0.33
HMG20B-211ENST00000486028 ABCC6O95255 1503 aa17.08■□□□□ 0.32
HMG20B-211ENST00000486028 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
HMG20B-211ENST00000486028 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
HMG20B-211ENST00000486028 CARD10Q9BWT7 1032 aa17.08■□□□□ 0.32
HMG20B-211ENST00000486028 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
HMG20B-211ENST00000486028 UPF1Q92900 1129 aaKnown RBP eCLIP17.07■□□□□ 0.32
HMG20B-211ENST00000486028 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-211ENST00000486028 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
HMG20B-211ENST00000486028 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-211ENST00000486028 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
HMG20B-211ENST00000486028 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
HMG20B-211ENST00000486028 ERBB3P21860 1342 aa17.05■□□□□ 0.32
HMG20B-211ENST00000486028 HOXC9P31274 260 aa17.05■□□□□ 0.32
HMG20B-211ENST00000486028 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
HMG20B-211ENST00000486028 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
HMG20B-211ENST00000486028 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
HMG20B-211ENST00000486028 NSD2O96028 1365 aa17.03■□□□□ 0.32
HMG20B-211ENST00000486028 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
HMG20B-211ENST00000486028 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
HMG20B-211ENST00000486028 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
HMG20B-211ENST00000486028 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
HMG20B-211ENST00000486028 LTN1O94822 1766 aa17.02■□□□□ 0.32
HMG20B-211ENST00000486028 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
HMG20B-211ENST00000486028 RGPD5Q99666 1765 aa17.02■□□□□ 0.31
HMG20B-211ENST00000486028 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
HMG20B-211ENST00000486028 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
HMG20B-211ENST00000486028 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
HMG20B-211ENST00000486028 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
HMG20B-211ENST00000486028 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
HMG20B-211ENST00000486028 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
HMG20B-211ENST00000486028 THSD7AQ9UPZ6 1657 aa17■□□□□ 0.31
HMG20B-211ENST00000486028 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
HMG20B-211ENST00000486028 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
HMG20B-211ENST00000486028 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
HMG20B-211ENST00000486028 FLT4P35916 1363 aa16.99■□□□□ 0.31
HMG20B-211ENST00000486028 DDB1Q16531 1140 aa16.98■□□□□ 0.31
HMG20B-211ENST00000486028 INSRP06213 1382 aa16.98■□□□□ 0.31
HMG20B-211ENST00000486028 EXOC5O00471 708 aa16.97■□□□□ 0.31
HMG20B-211ENST00000486028 FAM182BQ5T319 152 aa16.97■□□□□ 0.31
HMG20B-211ENST00000486028 FAM196AQ6ZSG2 479 aa16.97■□□□□ 0.31
HMG20B-211ENST00000486028 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
HMG20B-211ENST00000486028 IL2RBP14784 551 aa16.96■□□□□ 0.31
HMG20B-211ENST00000486028 EP400Q96L91 3159 aa16.95■□□□□ 0.3
HMG20B-211ENST00000486028 SF3B2Q13435 895 aaKnown RBP16.95■□□□□ 0.3
HMG20B-211ENST00000486028 CC2D1BQ5T0F9 858 aaKnown RBP16.94■□□□□ 0.3
HMG20B-211ENST00000486028 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
HMG20B-211ENST00000486028 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
HMG20B-211ENST00000486028 DISP2A7MBM2 1401 aa16.94■□□□□ 0.3
HMG20B-211ENST00000486028 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
HMG20B-211ENST00000486028 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
HMG20B-211ENST00000486028 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
HMG20B-211ENST00000486028 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
HMG20B-211ENST00000486028 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
HMG20B-211ENST00000486028 CNGB1Q14028 1251 aaPredicted RBP16.9■□□□□ 0.3
HMG20B-211ENST00000486028 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
HMG20B-211ENST00000486028 RAPGEF4Q8WZA2 1011 aa16.9■□□□□ 0.3
HMG20B-211ENST00000486028 FAM208AQ9UK61 1670 aaKnown RBP16.9■□□□□ 0.3
HMG20B-211ENST00000486028 TRIM37O94972 964 aa16.89■□□□□ 0.29
HMG20B-211ENST00000486028 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
HMG20B-211ENST00000486028 OVOS2A0A0G2JMS6 1433 aa16.88■□□□□ 0.29
HMG20B-211ENST00000486028 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
HMG20B-211ENST00000486028 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
HMG20B-211ENST00000486028 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
HMG20B-211ENST00000486028 BAG6P46379 1132 aa16.87■□□□□ 0.29
HMG20B-211ENST00000486028 EYA1Q99502 592 aa16.87■□□□□ 0.29
HMG20B-211ENST00000486028 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
HMG20B-211ENST00000486028 MTHFSP49914 203 aa16.86■□□□□ 0.29
HMG20B-211ENST00000486028 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
HMG20B-211ENST00000486028 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
HMG20B-211ENST00000486028 DDX54Q8TDD1 881 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms