RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 COL5A2P05997 1499 aaPredicted RBP10.46□□□□□ -0.74
CPNE1-226ENST00000486021 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.74
CPNE1-226ENST00000486021 DDB1Q16531 1140 aa10.45□□□□□ -0.74
CPNE1-226ENST00000486021 COL18A1P39060 1754 aa10.44□□□□□ -0.74
CPNE1-226ENST00000486021 TNS1Q9HBL0 1735 aaKnown RBP10.44□□□□□ -0.74
CPNE1-226ENST00000486021 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
CPNE1-226ENST00000486021 WDR17Q8IZU2 1322 aa10.44□□□□□ -0.74
CPNE1-226ENST00000486021 NBPF14Q5TI25 921 aa10.44□□□□□ -0.74
CPNE1-226ENST00000486021 LARP1Q6PKG0 1096 aaKnown RBP10.44□□□□□ -0.74
CPNE1-226ENST00000486021 SBF2Q86WG5 1849 aa10.44□□□□□ -0.74
CPNE1-226ENST00000486021 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
CPNE1-226ENST00000486021 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
CPNE1-226ENST00000486021 USP31Q70CQ4 1352 aa10.43□□□□□ -0.74
CPNE1-226ENST00000486021 ARHGEF25Q86VW2 580 aa10.43□□□□□ -0.74
CPNE1-226ENST00000486021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPNE1-226ENST00000486021 OVOS2A0A0G2JMS6 1433 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 OVOS2A0A0J9YW53 1432 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 OVOS2Q6IE36 1432 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 RGPD3A6NKT7 1758 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-226ENST00000486021 RGPD4Q7Z3J3 1758 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 EXOC5O00471 708 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 APBA3O96018 575 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 HMGB2P26583 209 aaKnown RBP10.42□□□□□ -0.74
CPNE1-226ENST00000486021 DEFB132Q7Z7B7 95 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 COG3Q96JB2 828 aa10.42□□□□□ -0.74
CPNE1-226ENST00000486021 TRIM37O94972 964 aa10.41□□□□□ -0.74
CPNE1-226ENST00000486021 CARD10Q9BWT7 1032 aa10.41□□□□□ -0.74
CPNE1-226ENST00000486021 KIF20BQ96Q89 1820 aa10.4□□□□□ -0.74
CPNE1-226ENST00000486021 SOX12O15370 315 aa10.4□□□□□ -0.74
CPNE1-226ENST00000486021 EN1Q05925 392 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-226ENST00000486021 PCGF6Q9BYE7 350 aa10.4□□□□□ -0.74
CPNE1-226ENST00000486021 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.74
CPNE1-226ENST00000486021 LRRC37A3O60309 1634 aa10.4□□□□□ -0.75
CPNE1-226ENST00000486021 USP47Q96K76 1375 aa10.39□□□□□ -0.75
CPNE1-226ENST00000486021 NFAT5O94916 1531 aa10.39□□□□□ -0.75
CPNE1-226ENST00000486021 LRP5O75197 1615 aa10.39□□□□□ -0.75
CPNE1-226ENST00000486021 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
CPNE1-226ENST00000486021 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
CPNE1-226ENST00000486021 RREB1Q92766 1687 aa10.38□□□□□ -0.75
CPNE1-226ENST00000486021 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
CPNE1-226ENST00000486021 EP400Q96L91 3159 aa10.38□□□□□ -0.75
CPNE1-226ENST00000486021 PLSCR1O15162 318 aa10.37□□□□□ -0.75
CPNE1-226ENST00000486021 IL2RBP14784 551 aa10.37□□□□□ -0.75
CPNE1-226ENST00000486021 AMPHP49418 695 aa10.37□□□□□ -0.75
CPNE1-226ENST00000486021 FAM182BQ5T319 152 aa10.37□□□□□ -0.75
CPNE1-226ENST00000486021 NLRP2Q9NX02 1062 aa10.37□□□□□ -0.75
CPNE1-226ENST00000486021 CD163L1Q9NR16 1453 aa10.36□□□□□ -0.75
CPNE1-226ENST00000486021 BCL9O00512 1426 aa10.36□□□□□ -0.75
CPNE1-226ENST00000486021 DCAF8L1A6NGE4 600 aa10.36□□□□□ -0.75
CPNE1-226ENST00000486021 EZH2Q15910 746 aaKnown RBP10.36□□□□□ -0.75
CPNE1-226ENST00000486021 NME9Q86XW9 330 aa10.36□□□□□ -0.75
CPNE1-226ENST00000486021 CCER1Q8TC90 406 aaPredicted RBP10.36□□□□□ -0.75
CPNE1-226ENST00000486021 TESK2Q96S53 571 aa10.36□□□□□ -0.75
CPNE1-226ENST00000486021 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
CPNE1-226ENST00000486021 NUP188Q5SRE5 1749 aa10.36□□□□□ -0.75
CPNE1-226ENST00000486021 ERBB3P21860 1342 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 ANKRD24Q8TF21 1146 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 IP6K1Q92551 441 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 CAMKK2Q96RR4 588 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 RTL1A6NKG5 1358 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 PEAK1Q9H792 1746 aa10.35□□□□□ -0.75
CPNE1-226ENST00000486021 MAP2P11137 1827 aaKnown RBP10.34□□□□□ -0.75
CPNE1-226ENST00000486021 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
CPNE1-226ENST00000486021 TNS2Q63HR2 1409 aa10.33□□□□□ -0.76
CPNE1-226ENST00000486021 EIF4G2P78344 907 aaKnown RBP eCLIP10.33□□□□□ -0.76
CPNE1-226ENST00000486021 NHSQ6T4R5 1651 aa10.33□□□□□ -0.76
CPNE1-226ENST00000486021 R3HDM1Q15032 1099 aaKnown RBP10.32□□□□□ -0.76
CPNE1-226ENST00000486021 ANKRD26Q9UPS8 1709 aa10.31□□□□□ -0.76
CPNE1-226ENST00000486021 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
CPNE1-226ENST00000486021 RGPD2P0DJD1 1756 aa10.3□□□□□ -0.76
CPNE1-226ENST00000486021 HOXC9P31274 260 aa10.3□□□□□ -0.76
CPNE1-226ENST00000486021 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
CPNE1-226ENST00000486021 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
CPNE1-226ENST00000486021 PPP1R1BQ9UD71 204 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-226ENST00000486021 MYOM1P52179 1685 aa10.29□□□□□ -0.76
CPNE1-226ENST00000486021 BTAF1O14981 1849 aa10.29□□□□□ -0.76
CPNE1-226ENST00000486021 FYB1O15117 783 aa10.29□□□□□ -0.76
CPNE1-226ENST00000486021 MARCH10Q8NA82 808 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-226ENST00000486021 LTV1Q96GA3 475 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-226ENST00000486021 SPON1Q9HCB6 807 aa10.29□□□□□ -0.76
CPNE1-226ENST00000486021 FLT4P35916 1363 aa10.28□□□□□ -0.76
CPNE1-226ENST00000486021 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-226ENST00000486021 POLR3GLQ9BT43 218 aa10.28□□□□□ -0.76
CPNE1-226ENST00000486021 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
CPNE1-226ENST00000486021 MAP3K19Q56UN5 1328 aa10.28□□□□□ -0.76
CPNE1-226ENST00000486021 ZCRB1Q8TBF4 217 aaKnown RBP10.27□□□□□ -0.77
CPNE1-226ENST00000486021 INSRP06213 1382 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 KCNQ2O43526 872 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 SLC27A3Q5K4L6 730 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
CPNE1-226ENST00000486021 QSER1Q2KHR3 1735 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 NSD2O96028 1365 aa10.26□□□□□ -0.77
CPNE1-226ENST00000486021 DOT1LQ8TEK3 1739 aa10.25□□□□□ -0.77
CPNE1-226ENST00000486021 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
CPNE1-226ENST00000486021 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms