RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 BARGINQ6ZT62 677 aa14.84□□□□□ -0.03
DDX56-212ENST00000485367 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
DDX56-212ENST00000485367 NME9Q86XW9 330 aa14.84□□□□□ -0.03
DDX56-212ENST00000485367 COL18A1P39060 1754 aa14.83□□□□□ -0.03
DDX56-212ENST00000485367 PRKCSHP14314 528 aaPredicted RBP14.83□□□□□ -0.03
DDX56-212ENST00000485367 ARHGEF25Q86VW2 580 aa14.83□□□□□ -0.03
DDX56-212ENST00000485367 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
DDX56-212ENST00000485367 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
DDX56-212ENST00000485367 SUPT16HQ9Y5B9 1047 aaKnown RBP14.82□□□□□ -0.04
DDX56-212ENST00000485367 CRB1P82279 1406 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
DDX56-212ENST00000485367 RGPD5Q99666 1765 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 TMF1P82094 1093 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 PDE3BQ13370 1112 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 TOM1L2Q6ZVM7 507 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 THRAP3Q9Y2W1 955 aaKnown RBP14.81□□□□□ -0.04
DDX56-212ENST00000485367 NFAT5O94916 1531 aa14.81□□□□□ -0.04
DDX56-212ENST00000485367 NINLQ9Y2I6 1382 aa14.8□□□□□ -0.04
DDX56-212ENST00000485367 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
DDX56-212ENST00000485367 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
DDX56-212ENST00000485367 ANP32EQ9BTT0 268 aa14.79□□□□□ -0.04
DDX56-212ENST00000485367 RGPD1P0DJD0 1748 aa14.79□□□□□ -0.04
DDX56-212ENST00000485367 WDR17Q8IZU2 1322 aa14.78□□□□□ -0.04
DDX56-212ENST00000485367 USP54Q70EL1 1684 aa14.78□□□□□ -0.04
DDX56-212ENST00000485367 BAG6P46379 1132 aa14.78□□□□□ -0.04
DDX56-212ENST00000485367 LTN1O94822 1766 aa14.76□□□□□ -0.05
DDX56-212ENST00000485367 TRIM37O94972 964 aa14.76□□□□□ -0.05
DDX56-212ENST00000485367 CDCA8Q53HL2 280 aa14.76□□□□□ -0.05
DDX56-212ENST00000485367 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
DDX56-212ENST00000485367 EN1Q05925 392 aaPredicted RBP14.75□□□□□ -0.05
DDX56-212ENST00000485367 CARD10Q9BWT7 1032 aa14.75□□□□□ -0.05
DDX56-212ENST00000485367 ANKRD36BQ8N2N9 1353 aa14.75□□□□□ -0.05
DDX56-212ENST00000485367 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
DDX56-212ENST00000485367 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
DDX56-212ENST00000485367 DDB1Q16531 1140 aa14.74□□□□□ -0.05
DDX56-212ENST00000485367 TNS1Q9HBL0 1735 aaKnown RBP14.74□□□□□ -0.05
DDX56-212ENST00000485367 ABCC6O95255 1503 aa14.74□□□□□ -0.05
DDX56-212ENST00000485367 COG3Q96JB2 828 aa14.73□□□□□ -0.05
DDX56-212ENST00000485367 WNK3Q9BYP7 1800 aa14.73□□□□□ -0.05
DDX56-212ENST00000485367 CDCA7Q9BWT1 371 aaPredicted RBP14.73□□□□□ -0.05
DDX56-212ENST00000485367 APBA3O96018 575 aa14.72□□□□□ -0.05
DDX56-212ENST00000485367 NLRP2Q9NX02 1062 aa14.72□□□□□ -0.05
DDX56-212ENST00000485367 LRRC37A3O60309 1634 aa14.72□□□□□ -0.05
DDX56-212ENST00000485367 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
DDX56-212ENST00000485367 ERBB3P21860 1342 aa14.7□□□□□ -0.06
DDX56-212ENST00000485367 CCDC7Q96M83 1385 aa14.7□□□□□ -0.06
DDX56-212ENST00000485367 DISP2A7MBM2 1401 aa14.7□□□□□ -0.06
DDX56-212ENST00000485367 EZH2Q15910 746 aaKnown RBP14.7□□□□□ -0.06
DDX56-212ENST00000485367 GGNBP2Q9H3C7 697 aa14.7□□□□□ -0.06
DDX56-212ENST00000485367 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
DDX56-212ENST00000485367 OVOS2A0A0G2JMS6 1433 aa14.69□□□□□ -0.06
DDX56-212ENST00000485367 C11orf95C9JLR9 678 aaPredicted RBP14.69□□□□□ -0.06
DDX56-212ENST00000485367 FYB1O15117 783 aa14.69□□□□□ -0.06
DDX56-212ENST00000485367 FBLN1P23142 703 aa14.69□□□□□ -0.06
DDX56-212ENST00000485367 IP6K1Q92551 441 aa14.69□□□□□ -0.06
DDX56-212ENST00000485367 LTV1Q96GA3 475 aaPredicted RBP14.69□□□□□ -0.06
DDX56-212ENST00000485367 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
DDX56-212ENST00000485367 EXOC5O00471 708 aa14.68□□□□□ -0.06
DDX56-212ENST00000485367 AMPHP49418 695 aa14.68□□□□□ -0.06
DDX56-212ENST00000485367 MARCH10Q8NA82 808 aaPredicted RBP14.68□□□□□ -0.06
DDX56-212ENST00000485367 CAMKK2Q96RR4 588 aa14.68□□□□□ -0.06
DDX56-212ENST00000485367 PEAK1Q9H792 1746 aa14.68□□□□□ -0.06
DDX56-212ENST00000485367 MYOM1P52179 1685 aa14.68□□□□□ -0.06
DDX56-212ENST00000485367 PSDA5PKW4 1024 aaPredicted RBP14.68□□□□□ -0.06
DDX56-212ENST00000485367 EIF4G2P78344 907 aaKnown RBP eCLIP14.68□□□□□ -0.06
DDX56-212ENST00000485367 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
DDX56-212ENST00000485367 SBF2Q86WG5 1849 aa14.66□□□□□ -0.06
DDX56-212ENST00000485367 KIF20BQ96Q89 1820 aa14.66□□□□□ -0.06
DDX56-212ENST00000485367 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
DDX56-212ENST00000485367 CARD14Q9BXL6 1004 aa14.66□□□□□ -0.06
DDX56-212ENST00000485367 NSD3Q9BZ95 1437 aa14.65□□□□□ -0.06
DDX56-212ENST00000485367 PARD3Q8TEW0 1356 aa14.65□□□□□ -0.06
DDX56-212ENST00000485367 IL2RBP14784 551 aa14.65□□□□□ -0.06
DDX56-212ENST00000485367 HOXC9P31274 260 aa14.65□□□□□ -0.06
DDX56-212ENST00000485367 RRS1Q15050 365 aaKnown RBP14.65□□□□□ -0.06
DDX56-212ENST00000485367 R3HDM1Q15032 1099 aaKnown RBP14.64□□□□□ -0.07
DDX56-212ENST00000485367 PTF1AQ7RTS3 328 aa14.63□□□□□ -0.07
DDX56-212ENST00000485367 TNS2Q63HR2 1409 aa14.63□□□□□ -0.07
DDX56-212ENST00000485367 FAM208AQ9UK61 1670 aaKnown RBP14.63□□□□□ -0.07
DDX56-212ENST00000485367 BCL11BQ9C0K0 894 aaPredicted RBP14.62□□□□□ -0.07
DDX56-212ENST00000485367 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
DDX56-212ENST00000485367 RGPD2P0DJD1 1756 aa14.61□□□□□ -0.07
DDX56-212ENST00000485367 RREB1Q92766 1687 aa14.61□□□□□ -0.07
DDX56-212ENST00000485367 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
DDX56-212ENST00000485367 KAT6BQ8WYB5 2073 aa14.61□□□□□ -0.07
DDX56-212ENST00000485367 BCL9O00512 1426 aa14.6□□□□□ -0.07
DDX56-212ENST00000485367 NUP188Q5SRE5 1749 aa14.6□□□□□ -0.07
DDX56-212ENST00000485367 CGNL1Q0VF96 1302 aa14.59□□□□□ -0.07
DDX56-212ENST00000485367 PLSCR1O15162 318 aa14.59□□□□□ -0.07
DDX56-212ENST00000485367 NBPF14Q5TI25 921 aa14.59□□□□□ -0.07
DDX56-212ENST00000485367 HSP90AB2PQ58FF8 381 aa14.58□□□□□ -0.08
DDX56-212ENST00000485367 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
DDX56-212ENST00000485367 ACSBG1Q96GR2 724 aa14.58□□□□□ -0.08
DDX56-212ENST00000485367 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.08
DDX56-212ENST00000485367 KCNQ2O43526 872 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
DDX56-212ENST00000485367 NBPF6Q5VWK0 638 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 USHBP1Q8N6Y0 703 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms