RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 FMNL3Q8IVF7 1028 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 TMC2Q8TDI7 906 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 FAM161BQ96MY7 647 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 NLRP2Q9NX02 1062 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 CUX1P39880 1505 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 HSD3B2P26439 372 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 EAPPQ56P03 285 aaPredicted RBP8.08□□□□□ -1.12
KPNA1-208ENST00000485027 RNF187Q5TA31 235 aaPredicted RBP8.08□□□□□ -1.12
KPNA1-208ENST00000485027 SPDYE1Q8NFV5 336 aaPredicted RBP8.08□□□□□ -1.12
KPNA1-208ENST00000485027 EPS8L1Q8TE68 723 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 GMLQ99445 158 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 TGIF2Q9GZN2 237 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 OSBPL2Q9H1P3 480 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 DDX56Q9NY93 547 aaKnown RBP8.08□□□□□ -1.12
KPNA1-208ENST00000485027 ABL1P00519 1130 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 NDUFV2P19404 249 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 FANCCQ00597 558 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 TMEM87AQ8NBN3 555 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 MTA3Q9BTC8 594 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 CCSER2Q9H7U1 834 aa8.08□□□□□ -1.12
KPNA1-208ENST00000485027 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
KPNA1-208ENST00000485027 HMGB1P1B2RPK0 211 aaPredicted RBP8.07□□□□□ -1.12
KPNA1-208ENST00000485027 MCCP23508 829 aa8.07□□□□□ -1.12
KPNA1-208ENST00000485027 ECM1Q16610 540 aa8.07□□□□□ -1.12
KPNA1-208ENST00000485027 KRBA2Q6ZNG9 492 aa8.07□□□□□ -1.12
KPNA1-208ENST00000485027 PLPP6Q8IY26 295 aa8.07□□□□□ -1.12
KPNA1-208ENST00000485027 UPF1Q92900 1129 aaKnown RBP eCLIP8.07□□□□□ -1.12
KPNA1-208ENST00000485027 RPS6KC1Q96S38 1066 aa8.07□□□□□ -1.12
KPNA1-208ENST00000485027 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
KPNA1-208ENST00000485027 BIVM-ERCC5R4GMW8 1640 aa8.07□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L12C9JPN9 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L21D6R901 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 LZTS3O60299 673 aaPredicted RBP8.06□□□□□ -1.12
KPNA1-208ENST00000485027 S100BP04271 92 aaPredicted RBP8.06□□□□□ -1.12
KPNA1-208ENST00000485027 EVA1CP58658 441 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 BIRC2Q13490 618 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 ZNF608Q9ULD9 1512 aaPredicted RBP8.06□□□□□ -1.12
KPNA1-208ENST00000485027 KIF4AO95239 1232 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 SOX11P35716 441 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 CTDSPL2Q05D32 466 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 SLFNL1Q499Z3 407 aa8.06□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
KPNA1-208ENST00000485027 P4HBP07237 508 aaKnown RBP8.05□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
KPNA1-208ENST00000485027 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
KPNA1-208ENST00000485027 RNF19AQ9NV58 838 aa8.05□□□□□ -1.12
KPNA1-208ENST00000485027 FGD5Q6ZNL6 1462 aa8.04□□□□□ -1.12
KPNA1-208ENST00000485027 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
KPNA1-208ENST00000485027 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
KPNA1-208ENST00000485027 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
KPNA1-208ENST00000485027 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
KPNA1-208ENST00000485027 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
KPNA1-208ENST00000485027 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
KPNA1-208ENST00000485027 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
KPNA1-208ENST00000485027 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
KPNA1-208ENST00000485027 FAM196BA6NMK8 535 aa8.03□□□□□ -1.12
KPNA1-208ENST00000485027 WDHD1O75717 1129 aaPredicted RBP8.03□□□□□ -1.12
KPNA1-208ENST00000485027 CCAR1Q8IX12 1150 aaKnown RBP8.03□□□□□ -1.12
KPNA1-208ENST00000485027 DEPDC4Q8N2C3 294 aa8.03□□□□□ -1.12
KPNA1-208ENST00000485027 JDP2Q8WYK2 163 aa8.03□□□□□ -1.12
KPNA1-208ENST00000485027 TOP2BQ02880 1626 aa8.03□□□□□ -1.12
KPNA1-208ENST00000485027 ICMTO60725 284 aa8.03□□□□□ -1.12
KPNA1-208ENST00000485027 LRRN4Q8WUT4 740 aa8.03□□□□□ -1.12
KPNA1-208ENST00000485027 PBRM1Q86U86 1689 aa8.02□□□□□ -1.12
KPNA1-208ENST00000485027 CHD1O14646 1710 aa8.02□□□□□ -1.12
KPNA1-208ENST00000485027 CCDC189A1A4V9 331 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 AMPD3Q01432 767 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 PTK7Q13308 1070 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 COL19A1Q14993 1142 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 TSC1Q92574 1164 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 AKT1S1Q96B36 256 aa8.02□□□□□ -1.13
KPNA1-208ENST00000485027 RAD54L2Q9Y4B4 1467 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 CCER2I3L3R5 266 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 RNF34Q969K3 372 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 RNF39Q9H2S5 420 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 SPC25Q9HBM1 224 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 ABCA5Q8WWZ7 1642 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 MAP3K13O43283 966 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 GYS2P54840 703 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
KPNA1-208ENST00000485027 FAM200AQ8TCP9 573 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 EGFL7Q9UHF1 273 aa8.01□□□□□ -1.13
KPNA1-208ENST00000485027 TTF2Q9UNY4 1162 aaKnown RBP8.01□□□□□ -1.13
KPNA1-208ENST00000485027 PRC1O43663 620 aa8□□□□□ -1.13
KPNA1-208ENST00000485027 DNAJC6O75061 913 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms