RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
CTSA-207ENST00000484855 MYH16Q9H6N6 1097 aa21.77■■□□□ 1.08
CTSA-207ENST00000484855 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.08
CTSA-207ENST00000484855 NCOA3Q9Y6Q9 1424 aa21.77■■□□□ 1.08
CTSA-207ENST00000484855 ORAI2Q96SN7 254 aa21.77■■□□□ 1.07
CTSA-207ENST00000484855 DCCP43146 1447 aa21.76■■□□□ 1.07
CTSA-207ENST00000484855 TRPM3Q9HCF6 1732 aaPredicted RBP21.75■■□□□ 1.07
CTSA-207ENST00000484855 AMPHP49418 695 aa21.75■■□□□ 1.07
CTSA-207ENST00000484855 NFE2L2Q16236 605 aa21.75■■□□□ 1.07
CTSA-207ENST00000484855 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.75■■□□□ 1.07
CTSA-207ENST00000484855 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
CTSA-207ENST00000484855 XIRP1Q702N8 1843 aaKnown RBP21.74■■□□□ 1.07
CTSA-207ENST00000484855 EXOC6Q8TAG9 804 aa21.74■■□□□ 1.07
CTSA-207ENST00000484855 IL16Q14005 1332 aa21.73■■□□□ 1.07
CTSA-207ENST00000484855 KIF24Q5T7B8 1368 aa21.73■■□□□ 1.07
CTSA-207ENST00000484855 ATF3P18847 181 aa21.72■■□□□ 1.07
CTSA-207ENST00000484855 MST1RQ04912 1400 aa21.72■■□□□ 1.07
CTSA-207ENST00000484855 ARHGEF10O15013 1369 aa21.72■■□□□ 1.07
CTSA-207ENST00000484855 FOXO3O43524 673 aa21.71■■□□□ 1.07
CTSA-207ENST00000484855 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
CTSA-207ENST00000484855 CCDC136Q96JN2 1154 aa21.71■■□□□ 1.07
CTSA-207ENST00000484855 NFAT5O94916 1531 aa21.71■■□□□ 1.07
CTSA-207ENST00000484855 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
CTSA-207ENST00000484855 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
CTSA-207ENST00000484855 BCAR3O75815 825 aa21.69■■□□□ 1.06
CTSA-207ENST00000484855 CRBNQ96SW2 442 aa21.68■■□□□ 1.06
CTSA-207ENST00000484855 RTL1A6NKG5 1358 aa21.68■■□□□ 1.06
CTSA-207ENST00000484855 HOXC9P31274 260 aa21.68■■□□□ 1.06
CTSA-207ENST00000484855 XPCQ01831 940 aaPredicted RBP21.68■■□□□ 1.06
CTSA-207ENST00000484855 C20orf194Q5TEA3 1177 aa21.68■■□□□ 1.06
CTSA-207ENST00000484855 TSR2Q969E8 191 aaKnown RBP21.68■■□□□ 1.06
CTSA-207ENST00000484855 MSH6P52701 1360 aa21.67■■□□□ 1.06
CTSA-207ENST00000484855 PHRF1Q9P1Y6 1649 aaKnown RBP21.67■■□□□ 1.06
CTSA-207ENST00000484855 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
CTSA-207ENST00000484855 ALS2Q96Q42 1657 aa21.66■■□□□ 1.06
CTSA-207ENST00000484855 SLIT3O75094 1523 aa21.66■■□□□ 1.06
CTSA-207ENST00000484855 KRT28Q7Z3Y7 464 aa21.65■■□□□ 1.06
CTSA-207ENST00000484855 CADPS2Q86UW7 1296 aa21.65■■□□□ 1.06
CTSA-207ENST00000484855 CALD1Q05682 793 aaKnown RBP21.65■■□□□ 1.06
CTSA-207ENST00000484855 KCNH5Q8NCM2 988 aa21.65■■□□□ 1.06
CTSA-207ENST00000484855 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.06
CTSA-207ENST00000484855 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.06
CTSA-207ENST00000484855 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
CTSA-207ENST00000484855 KDRP35968 1356 aa21.63■■□□□ 1.05
CTSA-207ENST00000484855 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
CTSA-207ENST00000484855 EYA1Q99502 592 aa21.62■■□□□ 1.05
CTSA-207ENST00000484855 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
CTSA-207ENST00000484855 LMOD2Q6P5Q4 547 aa21.61■■□□□ 1.05
CTSA-207ENST00000484855 THUMPD2Q9BTF0 503 aaKnown RBP21.61■■□□□ 1.05
CTSA-207ENST00000484855 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
CTSA-207ENST00000484855 IP6K1Q92551 441 aa21.59■■□□□ 1.05
CTSA-207ENST00000484855 USP19O94966 1318 aa21.59■■□□□ 1.05
CTSA-207ENST00000484855 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
CTSA-207ENST00000484855 IFT57Q9NWB7 429 aa21.58■■□□□ 1.05
CTSA-207ENST00000484855 GNAI1P63096 354 aa21.58■■□□□ 1.04
CTSA-207ENST00000484855 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.04
CTSA-207ENST00000484855 FAM83GA6ND36 823 aa21.57■■□□□ 1.04
CTSA-207ENST00000484855 GCP02774 474 aa21.57■■□□□ 1.04
CTSA-207ENST00000484855 BCL2L13Q9BXK5 485 aa21.57■■□□□ 1.04
CTSA-207ENST00000484855 RGPD2P0DJD1 1756 aa21.57■■□□□ 1.04
CTSA-207ENST00000484855 ZBTB7CA1YPR0 619 aa21.57■■□□□ 1.04
CTSA-207ENST00000484855 FRAT1Q92837 279 aaPredicted RBP21.57■■□□□ 1.04
CTSA-207ENST00000484855 PDE3AQ14432 1141 aa21.56■■□□□ 1.04
CTSA-207ENST00000484855 NPHP3Q7Z494 1330 aa21.56■■□□□ 1.04
CTSA-207ENST00000484855 PLEKHG5O94827 1062 aa21.55■■□□□ 1.04
CTSA-207ENST00000484855 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
CTSA-207ENST00000484855 MED1Q15648 1581 aaPredicted RBP21.54■■□□□ 1.04
CTSA-207ENST00000484855 ZNF853P0CG23 659 aa21.54■■□□□ 1.04
CTSA-207ENST00000484855 DDX17Q92841 729 aaKnown RBP21.54■■□□□ 1.04
CTSA-207ENST00000484855 TSHZ2Q9NRE2 1034 aa21.54■■□□□ 1.04
CTSA-207ENST00000484855 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 PXDNQ92626 1479 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 MTHFSDQ2M296 383 aaKnown RBP21.53■■□□□ 1.04
CTSA-207ENST00000484855 TNS3Q68CZ2 1445 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 ARHGEF25Q86VW2 580 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 MBIPQ9NS73 344 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
CTSA-207ENST00000484855 GAS2L2Q8NHY3 880 aa21.52■■□□□ 1.04
CTSA-207ENST00000484855 MCM10Q7L590 875 aa21.5■■□□□ 1.03
CTSA-207ENST00000484855 PANK1Q8TE04 598 aa21.5■■□□□ 1.03
CTSA-207ENST00000484855 SSH1Q8WYL5 1049 aa21.5■■□□□ 1.03
CTSA-207ENST00000484855 CRYBG1Q9Y4K1 1723 aa21.5■■□□□ 1.03
CTSA-207ENST00000484855 USHBP1Q8N6Y0 703 aa21.49■■□□□ 1.03
CTSA-207ENST00000484855 BRINP3Q76B58 766 aa21.48■■□□□ 1.03
CTSA-207ENST00000484855 LRRC37A3O60309 1634 aa21.48■■□□□ 1.03
CTSA-207ENST00000484855 ZKSCAN2Q63HK3 967 aa21.48■■□□□ 1.03
CTSA-207ENST00000484855 RTF1Q92541 710 aaKnown RBP21.48■■□□□ 1.03
CTSA-207ENST00000484855 ZNF428Q96B54 188 aa21.48■■□□□ 1.03
CTSA-207ENST00000484855 CAMTA1Q9Y6Y1 1673 aa21.48■■□□□ 1.03
CTSA-207ENST00000484855 ALDH1L2Q3SY69 923 aa21.47■■□□□ 1.03
CTSA-207ENST00000484855 COG6Q9Y2V7 657 aa21.47■■□□□ 1.03
CTSA-207ENST00000484855 NBPF6Q5VWK0 638 aa21.46■■□□□ 1.03
CTSA-207ENST00000484855 NBPF4Q96M43 638 aa21.46■■□□□ 1.03
CTSA-207ENST00000484855 CRB1P82279 1406 aa21.46■■□□□ 1.03
CTSA-207ENST00000484855 TNNQ9UQP3 1299 aa21.46■■□□□ 1.03
CTSA-207ENST00000484855 SPATA31A3Q5VYP0 1347 aa21.45■■□□□ 1.02
CTSA-207ENST00000484855 KIF16BQ96L93 1317 aa21.45■■□□□ 1.02
CTSA-207ENST00000484855 RLBP1P12271 317 aa21.44■■□□□ 1.02
CTSA-207ENST00000484855 SLAIN2Q9P270 581 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms