RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ATP10BO94823 1461 aa18.07■□□□□ 0.48
RXRA-203ENST00000484822 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
RXRA-203ENST00000484822 ERICH4A6NGS2 130 aa18.07■□□□□ 0.48
RXRA-203ENST00000484822 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
RXRA-203ENST00000484822 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
RXRA-203ENST00000484822 ZSCAN30Q86W11 494 aa18.06■□□□□ 0.48
RXRA-203ENST00000484822 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
RXRA-203ENST00000484822 UGGT2Q9NYU1 1516 aa18.06■□□□□ 0.48
RXRA-203ENST00000484822 SAFBQ15424 915 aaKnown RBP eCLIP18.06■□□□□ 0.48
RXRA-203ENST00000484822 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
RXRA-203ENST00000484822 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
RXRA-203ENST00000484822 K7ELQ4 463 aaPredicted RBP18.06■□□□□ 0.48
RXRA-203ENST00000484822 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
RXRA-203ENST00000484822 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
RXRA-203ENST00000484822 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
RXRA-203ENST00000484822 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
RXRA-203ENST00000484822 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
RXRA-203ENST00000484822 MCM2P49736 904 aa18.05■□□□□ 0.48
RXRA-203ENST00000484822 PLCH2O75038 1416 aa18.04■□□□□ 0.48
RXRA-203ENST00000484822 CCDC192P0DO97 292 aa18.04■□□□□ 0.48
RXRA-203ENST00000484822 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
RXRA-203ENST00000484822 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
RXRA-203ENST00000484822 HSP90AB4PQ58FF6 505 aa18.04■□□□□ 0.48
RXRA-203ENST00000484822 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
RXRA-203ENST00000484822 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
RXRA-203ENST00000484822 WDR97A6NE52 1622 aa18.03■□□□□ 0.48
RXRA-203ENST00000484822 KDM4AO75164 1064 aa18.03■□□□□ 0.48
RXRA-203ENST00000484822 PDCL2Q8N4E4 241 aa18.03■□□□□ 0.48
RXRA-203ENST00000484822 RALYLQ86SE5 291 aaKnown RBP18.03■□□□□ 0.48
RXRA-203ENST00000484822 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.48
RXRA-203ENST00000484822 ASXL2Q76L83 1435 aa18.02■□□□□ 0.48
RXRA-203ENST00000484822 PSMA5P28066 241 aa18.02■□□□□ 0.48
RXRA-203ENST00000484822 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.47
RXRA-203ENST00000484822 PLCD4Q9BRC7 762 aa18.02■□□□□ 0.47
RXRA-203ENST00000484822 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
RXRA-203ENST00000484822 PDCP20941 246 aa18.01■□□□□ 0.47
RXRA-203ENST00000484822 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
RXRA-203ENST00000484822 CCP110O43303 1012 aa18.01■□□□□ 0.47
RXRA-203ENST00000484822 CT47B1P0C2W7 299 aaPredicted RBP18.01■□□□□ 0.47
RXRA-203ENST00000484822 CBX1P83916 185 aa18.01■□□□□ 0.47
RXRA-203ENST00000484822 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
RXRA-203ENST00000484822 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
RXRA-203ENST00000484822 OFD1O75665 1012 aa18.01■□□□□ 0.47
RXRA-203ENST00000484822 RAD21O60216 631 aa18■□□□□ 0.47
RXRA-203ENST00000484822 DHX16O60231 1041 aaKnown RBP18■□□□□ 0.47
RXRA-203ENST00000484822 WDR62O43379 1518 aa18■□□□□ 0.47
RXRA-203ENST00000484822 ATP2B1P20020 1258 aa18■□□□□ 0.47
RXRA-203ENST00000484822 VPS37DQ86XT2 251 aa18■□□□□ 0.47
RXRA-203ENST00000484822 CNTROBQ8N137 903 aa18■□□□□ 0.47
RXRA-203ENST00000484822 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
RXRA-203ENST00000484822 UBTFL1P0CB47 393 aaPredicted RBP18■□□□□ 0.47
RXRA-203ENST00000484822 PRKAR2BP31323 418 aa18■□□□□ 0.47
RXRA-203ENST00000484822 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
RXRA-203ENST00000484822 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 CCDC61Q9Y6R9 512 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 KIAA0556O60303 1618 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 NEUROD6Q96NK8 337 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 ERICH2A1L162 156 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 SKAP1Q86WV1 359 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 FSD1Q9BTV5 496 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 TCEAL9Q9UHQ7 104 aa17.99■□□□□ 0.47
RXRA-203ENST00000484822 SURF6O75683 361 aaKnown RBP17.98■□□□□ 0.47
RXRA-203ENST00000484822 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
RXRA-203ENST00000484822 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
RXRA-203ENST00000484822 CIZ1Q9ULV3 898 aaPredicted RBP17.97■□□□□ 0.47
RXRA-203ENST00000484822 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
RXRA-203ENST00000484822 SERPINC1P01008 464 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 IDI1Q13907 227 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 GCC1Q96CN9 775 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
RXRA-203ENST00000484822 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 WDR7Q9Y4E6 1490 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 SYCE3A1L190 88 aa17.97■□□□□ 0.47
RXRA-203ENST00000484822 NINLQ9Y2I6 1382 aa17.96■□□□□ 0.47
RXRA-203ENST00000484822 TSR2Q969E8 191 aaKnown RBP17.96■□□□□ 0.47
RXRA-203ENST00000484822 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
RXRA-203ENST00000484822 XPCQ01831 940 aaPredicted RBP17.96■□□□□ 0.47
RXRA-203ENST00000484822 STK38Q15208 465 aa17.96■□□□□ 0.47
RXRA-203ENST00000484822 CT47A1Q5JQC4 288 aaPredicted RBP17.96■□□□□ 0.47
RXRA-203ENST00000484822 DHX37Q8IY37 1157 aaKnown RBP17.96■□□□□ 0.47
RXRA-203ENST00000484822 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
RXRA-203ENST00000484822 NOB1Q9ULX3 412 aaKnown RBP17.95■□□□□ 0.46
RXRA-203ENST00000484822 NUDT16Q96DE0 195 aaKnown RBP17.95■□□□□ 0.46
RXRA-203ENST00000484822 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
RXRA-203ENST00000484822 KIAA0754O94854 1291 aa17.95■□□□□ 0.46
RXRA-203ENST00000484822 FILIP1LQ4L180 1135 aa17.95■□□□□ 0.46
RXRA-203ENST00000484822 SMARCE1Q969G3 411 aa17.95■□□□□ 0.46
RXRA-203ENST00000484822 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
RXRA-203ENST00000484822 ZMYND15Q9H091 742 aa17.94■□□□□ 0.46
RXRA-203ENST00000484822 RPRD2Q5VT52 1461 aaKnown RBP17.94■□□□□ 0.46
RXRA-203ENST00000484822 PDCL3Q9H2J4 239 aa17.94■□□□□ 0.46
RXRA-203ENST00000484822 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
RXRA-203ENST00000484822 KRT85P78386 507 aa17.93■□□□□ 0.46
RXRA-203ENST00000484822 TATP17735 454 aaPredicted RBP17.93■□□□□ 0.46
RXRA-203ENST00000484822 STK3Q13188 491 aa17.93■□□□□ 0.46
RXRA-203ENST00000484822 ZHX1Q9UKY1 873 aaPredicted RBP17.93■□□□□ 0.46
RXRA-203ENST00000484822 NUP160Q12769 1436 aa17.93■□□□□ 0.46
RXRA-203ENST00000484822 AIMP1Q12904 312 aaKnown RBP17.92■□□□□ 0.46
RXRA-203ENST00000484822 UBE2Q2Q8WVN8 375 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms