RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
NUP50-215ENST00000484186 COL18A1P39060 1754 aa13.3□□□□□ -0.28
NUP50-215ENST00000484186 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
NUP50-215ENST00000484186 NME9Q86XW9 330 aa13.3□□□□□ -0.28
NUP50-215ENST00000484186 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
NUP50-215ENST00000484186 CSB-PGBD3P0DP91 1061 aa13.29□□□□□ -0.28
NUP50-215ENST00000484186 DDB1Q16531 1140 aa13.29□□□□□ -0.28
NUP50-215ENST00000484186 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
NUP50-215ENST00000484186 MON2Q7Z3U7 1717 aa13.28□□□□□ -0.28
NUP50-215ENST00000484186 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
NUP50-215ENST00000484186 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
NUP50-215ENST00000484186 NFAT5O94916 1531 aa13.28□□□□□ -0.28
NUP50-215ENST00000484186 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
NUP50-215ENST00000484186 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.28
NUP50-215ENST00000484186 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
NUP50-215ENST00000484186 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
NUP50-215ENST00000484186 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
NUP50-215ENST00000484186 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
NUP50-215ENST00000484186 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
NUP50-215ENST00000484186 NINLQ9Y2I6 1382 aa13.25□□□□□ -0.29
NUP50-215ENST00000484186 EXOC5O00471 708 aa13.25□□□□□ -0.29
NUP50-215ENST00000484186 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
NUP50-215ENST00000484186 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
NUP50-215ENST00000484186 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
NUP50-215ENST00000484186 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
NUP50-215ENST00000484186 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
NUP50-215ENST00000484186 ABCC6O95255 1503 aa13.23□□□□□ -0.29
NUP50-215ENST00000484186 TMF1P82094 1093 aa13.23□□□□□ -0.29
NUP50-215ENST00000484186 USP54Q70EL1 1684 aa13.23□□□□□ -0.29
NUP50-215ENST00000484186 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 USP47Q96K76 1375 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 ERBB3P21860 1342 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 COG3Q96JB2 828 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
NUP50-215ENST00000484186 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
NUP50-215ENST00000484186 PLSCR1O15162 318 aa13.21□□□□□ -0.29
NUP50-215ENST00000484186 IP6K1Q92551 441 aa13.21□□□□□ -0.29
NUP50-215ENST00000484186 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
NUP50-215ENST00000484186 PEAK1Q9H792 1746 aa13.21□□□□□ -0.3
NUP50-215ENST00000484186 BCL9O00512 1426 aa13.21□□□□□ -0.3
NUP50-215ENST00000484186 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
NUP50-215ENST00000484186 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
NUP50-215ENST00000484186 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
NUP50-215ENST00000484186 IL2RBP14784 551 aa13.19□□□□□ -0.3
NUP50-215ENST00000484186 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
NUP50-215ENST00000484186 PTF1AQ7RTS3 328 aa13.19□□□□□ -0.3
NUP50-215ENST00000484186 LRP5O75197 1615 aa13.19□□□□□ -0.3
NUP50-215ENST00000484186 RREB1Q92766 1687 aa13.18□□□□□ -0.3
NUP50-215ENST00000484186 LTN1O94822 1766 aa13.17□□□□□ -0.3
NUP50-215ENST00000484186 FYB1O15117 783 aa13.17□□□□□ -0.3
NUP50-215ENST00000484186 FBLN1P23142 703 aa13.17□□□□□ -0.3
NUP50-215ENST00000484186 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
NUP50-215ENST00000484186 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
NUP50-215ENST00000484186 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
NUP50-215ENST00000484186 AMPHP49418 695 aa13.16□□□□□ -0.3
NUP50-215ENST00000484186 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
NUP50-215ENST00000484186 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
NUP50-215ENST00000484186 KCNQ2O43526 872 aa13.15□□□□□ -0.3
NUP50-215ENST00000484186 HOXC9P31274 260 aa13.15□□□□□ -0.3
NUP50-215ENST00000484186 PROM2Q8N271 834 aa13.15□□□□□ -0.3
NUP50-215ENST00000484186 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
NUP50-215ENST00000484186 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
NUP50-215ENST00000484186 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
NUP50-215ENST00000484186 RGPD3A6NKT7 1758 aaPredicted RBP13.12□□□□□ -0.31
NUP50-215ENST00000484186 RGPD4Q7Z3J3 1758 aa13.12□□□□□ -0.31
NUP50-215ENST00000484186 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
NUP50-215ENST00000484186 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
NUP50-215ENST00000484186 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
NUP50-215ENST00000484186 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
NUP50-215ENST00000484186 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
NUP50-215ENST00000484186 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
NUP50-215ENST00000484186 NBPF6Q5VWK0 638 aa13.09□□□□□ -0.31
NUP50-215ENST00000484186 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
NUP50-215ENST00000484186 NBPF4Q96M43 638 aa13.09□□□□□ -0.31
NUP50-215ENST00000484186 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
NUP50-215ENST00000484186 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.31
NUP50-215ENST00000484186 SLC15A2Q16348 729 aa13.08□□□□□ -0.32
NUP50-215ENST00000484186 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.32
NUP50-215ENST00000484186 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
NUP50-215ENST00000484186 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
NUP50-215ENST00000484186 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
NUP50-215ENST00000484186 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
NUP50-215ENST00000484186 INSRP06213 1382 aa13.07□□□□□ -0.32
NUP50-215ENST00000484186 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
NUP50-215ENST00000484186 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
NUP50-215ENST00000484186 USHBP1Q8N6Y0 703 aa13.06□□□□□ -0.32
NUP50-215ENST00000484186 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
NUP50-215ENST00000484186 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
NUP50-215ENST00000484186 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
NUP50-215ENST00000484186 FLT4P35916 1363 aa13.06□□□□□ -0.32
NUP50-215ENST00000484186 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
NUP50-215ENST00000484186 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
NUP50-215ENST00000484186 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
NUP50-215ENST00000484186 PDGFDQ9GZP0 370 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms