RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
TTC3-218ENST00000484047 ICMTO60725 284 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 ECM1Q16610 540 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 GPSM3Q9Y4H4 160 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 PTK2Q05397 1052 aa13.75□□□□□ -0.21
TTC3-218ENST00000484047 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
TTC3-218ENST00000484047 SREK1Q8WXA9 508 aaKnown RBP13.75□□□□□ -0.21
TTC3-218ENST00000484047 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 SIX5Q8N196 739 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 SLC4A5Q9BY07 1137 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 MAPK1P28482 360 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 ATP1A2P50993 1020 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 DMRTA1Q5VZB9 504 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 PDXDC2PQ6P474 469 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 CCDC125Q86Z20 511 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
TTC3-218ENST00000484047 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
TTC3-218ENST00000484047 LGR5O75473 907 aa13.72□□□□□ -0.21
TTC3-218ENST00000484047 JUNDP17535 347 aa13.72□□□□□ -0.21
TTC3-218ENST00000484047 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
TTC3-218ENST00000484047 ZNF592Q92610 1267 aa13.72□□□□□ -0.21
TTC3-218ENST00000484047 ASB16Q96NS5 453 aa13.72□□□□□ -0.21
TTC3-218ENST00000484047 ADAM32Q8TC27 787 aa13.71□□□□□ -0.21
TTC3-218ENST00000484047 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
TTC3-218ENST00000484047 SEC13P55735 322 aa13.7□□□□□ -0.22
TTC3-218ENST00000484047 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
TTC3-218ENST00000484047 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
TTC3-218ENST00000484047 SEPT3Q9UH03 358 aa13.7□□□□□ -0.22
TTC3-218ENST00000484047 THAP11Q96EK4 314 aa13.7□□□□□ -0.22
TTC3-218ENST00000484047 SFI1A8K8P3 1242 aa13.69□□□□□ -0.22
TTC3-218ENST00000484047 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
TTC3-218ENST00000484047 GTF3C2Q8WUA4 911 aaPredicted RBP13.69□□□□□ -0.22
TTC3-218ENST00000484047 ARHGAP33O14559 1287 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 C21orf2O43822 256 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 GTF2IP78347 998 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
TTC3-218ENST00000484047 VPS9D1Q9Y2B5 631 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 DNMT3AQ9Y6K1 912 aaPredicted RBP13.68□□□□□ -0.22
TTC3-218ENST00000484047 ARHGAP4P98171 946 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 CCDC102BQ68D86 513 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 DCTN4Q9UJW0 460 aa13.68□□□□□ -0.22
TTC3-218ENST00000484047 TSNAXIP1Q2TAA8 658 aa13.67□□□□□ -0.22
TTC3-218ENST00000484047 SCUBE3Q8IX30 993 aa13.67□□□□□ -0.22
TTC3-218ENST00000484047 DOLKQ9UPQ8 538 aa13.67□□□□□ -0.22
TTC3-218ENST00000484047 OXLD1Q5BKU9 147 aa13.66□□□□□ -0.22
TTC3-218ENST00000484047 GPKOWQ92917 476 aaPredicted RBP eCLIP13.66□□□□□ -0.22
TTC3-218ENST00000484047 EVA1BQ9NVM1 165 aa13.66□□□□□ -0.22
TTC3-218ENST00000484047 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
TTC3-218ENST00000484047 NAALADL2Q58DX5 795 aa13.66□□□□□ -0.22
TTC3-218ENST00000484047 MKNK1Q9BUB5 465 aa13.66□□□□□ -0.22
TTC3-218ENST00000484047 CCNYL3P0C7X3 344 aa13.65□□□□□ -0.22
TTC3-218ENST00000484047 POTEHQ6S545 545 aa13.65□□□□□ -0.22
TTC3-218ENST00000484047 TPCN2Q8NHX9 752 aa13.65□□□□□ -0.22
TTC3-218ENST00000484047 ARMC2Q8NEN0 867 aa13.64□□□□□ -0.23
TTC3-218ENST00000484047 FMNL1O95466 1100 aaPredicted RBP13.64□□□□□ -0.23
TTC3-218ENST00000484047 ARHGAP9Q9BRR9 750 aa13.64□□□□□ -0.23
TTC3-218ENST00000484047 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
TTC3-218ENST00000484047 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
TTC3-218ENST00000484047 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
TTC3-218ENST00000484047 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
TTC3-218ENST00000484047 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
TTC3-218ENST00000484047 PCDHGA11Q9Y5H2 935 aa13.62□□□□□ -0.23
TTC3-218ENST00000484047 BHMG1C9JSJ3 638 aaPredicted RBP13.61□□□□□ -0.23
TTC3-218ENST00000484047 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
TTC3-218ENST00000484047 PURBQ96QR8 312 aaKnown RBP13.61□□□□□ -0.23
TTC3-218ENST00000484047 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
TTC3-218ENST00000484047 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
TTC3-218ENST00000484047 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
TTC3-218ENST00000484047 ZBTB33Q86T24 672 aa13.6□□□□□ -0.23
TTC3-218ENST00000484047 HINFPQ9BQA5 517 aa13.6□□□□□ -0.23
TTC3-218ENST00000484047 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
TTC3-218ENST00000484047 FKBP5Q13451 457 aaPredicted RBP13.59□□□□□ -0.23
TTC3-218ENST00000484047 RGL4Q8IZJ4 473 aa13.59□□□□□ -0.23
TTC3-218ENST00000484047 LRCH3Q96II8 777 aa13.59□□□□□ -0.23
TTC3-218ENST00000484047 GIGYF1O75420 1035 aaPredicted RBP13.58□□□□□ -0.23
TTC3-218ENST00000484047 COL19A1Q14993 1142 aa13.58□□□□□ -0.23
TTC3-218ENST00000484047 PSME1Q06323 249 aa13.58□□□□□ -0.24
TTC3-218ENST00000484047 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
TTC3-218ENST00000484047 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
TTC3-218ENST00000484047 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.24
TTC3-218ENST00000484047 UBXN4Q92575 508 aa13.58□□□□□ -0.24
TTC3-218ENST00000484047 PRR14Q9BWN1 585 aa13.58□□□□□ -0.24
TTC3-218ENST00000484047 DXOO77932 396 aaKnown RBP13.57□□□□□ -0.24
TTC3-218ENST00000484047 WEE1P30291 646 aa13.57□□□□□ -0.24
TTC3-218ENST00000484047 APLP1P51693 650 aa13.57□□□□□ -0.24
TTC3-218ENST00000484047 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
TTC3-218ENST00000484047 ERCC5P28715 1186 aaPredicted RBP13.56□□□□□ -0.24
TTC3-218ENST00000484047 MRPL58Q14197 206 aaKnown RBP13.56□□□□□ -0.24
TTC3-218ENST00000484047 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.56□□□□□ -0.24
TTC3-218ENST00000484047 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
TTC3-218ENST00000484047 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
TTC3-218ENST00000484047 TSEN2Q8NCE0 465 aaKnown RBP13.56□□□□□ -0.24
TTC3-218ENST00000484047 P4HBP07237 508 aaKnown RBP13.55□□□□□ -0.24
TTC3-218ENST00000484047 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
TTC3-218ENST00000484047 PRDM9Q9NQV7 894 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms