RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TONSLQ96HA7 1378 aa25.63■■□□□ 1.69
ATG4B-221ENST00000483778 SBNO2Q9Y2G9 1366 aa25.63■■□□□ 1.69
ATG4B-221ENST00000483778 NFAT5O94916 1531 aa25.63■■□□□ 1.69
ATG4B-221ENST00000483778 PEAK1Q9H792 1746 aa25.62■■□□□ 1.69
ATG4B-221ENST00000483778 WNK3Q9BYP7 1800 aa25.61■■□□□ 1.69
ATG4B-221ENST00000483778 NME9Q86XW9 330 aa25.61■■□□□ 1.69
ATG4B-221ENST00000483778 LRRC37A3O60309 1634 aa25.6■■□□□ 1.69
ATG4B-221ENST00000483778 LRP5O75197 1615 aa25.6■■□□□ 1.69
ATG4B-221ENST00000483778 PTF1AQ7RTS3 328 aa25.6■■□□□ 1.69
ATG4B-221ENST00000483778 KCNH5Q8NCM2 988 aa25.6■■□□□ 1.69
ATG4B-221ENST00000483778 TMC1Q8TDI8 760 aa25.6■■□□□ 1.69
ATG4B-221ENST00000483778 WDR17Q8IZU2 1322 aa25.6■■□□□ 1.69
ATG4B-221ENST00000483778 RREB1Q92766 1687 aa25.58■■□□□ 1.69
ATG4B-221ENST00000483778 NUP188Q5SRE5 1749 aa25.57■■□□□ 1.68
ATG4B-221ENST00000483778 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
ATG4B-221ENST00000483778 DDB1Q16531 1140 aa25.55■■□□□ 1.68
ATG4B-221ENST00000483778 MARCH10Q8NA82 808 aaPredicted RBP25.55■■□□□ 1.68
ATG4B-221ENST00000483778 TESK2Q96S53 571 aa25.55■■□□□ 1.68
ATG4B-221ENST00000483778 USP31Q70CQ4 1352 aa25.55■■□□□ 1.68
ATG4B-221ENST00000483778 LTN1O94822 1766 aa25.54■■□□□ 1.68
ATG4B-221ENST00000483778 USP54Q70EL1 1684 aa25.54■■□□□ 1.68
ATG4B-221ENST00000483778 ST20-MTHFSA0A0A6YYL1 179 aa25.53■■□□□ 1.68
ATG4B-221ENST00000483778 CSB-PGBD3P0DP91 1061 aa25.53■■□□□ 1.68
ATG4B-221ENST00000483778 CARD10Q9BWT7 1032 aa25.53■■□□□ 1.68
ATG4B-221ENST00000483778 OVOS2A0A0G2JMS6 1433 aa25.5■■□□□ 1.67
ATG4B-221ENST00000483778 OVOS2A0A0J9YW53 1432 aa25.5■■□□□ 1.67
ATG4B-221ENST00000483778 A0A1W2PP64 1363 aa25.5■■□□□ 1.67
ATG4B-221ENST00000483778 OVOS2Q6IE36 1432 aa25.5■■□□□ 1.67
ATG4B-221ENST00000483778 HDGFL2Q7Z4V5 671 aaPredicted RBP25.5■■□□□ 1.67
ATG4B-221ENST00000483778 PARD3Q8TEW0 1356 aa25.5■■□□□ 1.67
ATG4B-221ENST00000483778 EDC4Q6P2E9 1401 aaKnown RBP25.47■■□□□ 1.67
ATG4B-221ENST00000483778 PUS7Q96PZ0 661 aaKnown RBP25.47■■□□□ 1.67
ATG4B-221ENST00000483778 TERF2IPQ9NYB0 399 aa25.46■■□□□ 1.67
ATG4B-221ENST00000483778 KAT6BQ8WYB5 2073 aa25.45■■□□□ 1.66
ATG4B-221ENST00000483778 FBLN1P23142 703 aa25.44■■□□□ 1.66
ATG4B-221ENST00000483778 PROM2Q8N271 834 aa25.44■■□□□ 1.66
ATG4B-221ENST00000483778 CDCA7Q9BWT1 371 aaPredicted RBP25.44■■□□□ 1.66
ATG4B-221ENST00000483778 BCL11BQ9C0K0 894 aaPredicted RBP25.44■■□□□ 1.66
ATG4B-221ENST00000483778 ABCC6O95255 1503 aa25.43■■□□□ 1.66
ATG4B-221ENST00000483778 EXOC5O00471 708 aa25.43■■□□□ 1.66
ATG4B-221ENST00000483778 NLRP2Q9NX02 1062 aa25.43■■□□□ 1.66
ATG4B-221ENST00000483778 ERBB3P21860 1342 aa25.42■■□□□ 1.66
ATG4B-221ENST00000483778 C11orf95C9JLR9 678 aaPredicted RBP25.42■■□□□ 1.66
ATG4B-221ENST00000483778 PLSCR1O15162 318 aa25.42■■□□□ 1.66
ATG4B-221ENST00000483778 NBPF14Q5TI25 921 aa25.41■■□□□ 1.66
ATG4B-221ENST00000483778 ANKRD24Q8TF21 1146 aa25.41■■□□□ 1.66
ATG4B-221ENST00000483778 CCDC7Q96M83 1385 aa25.41■■□□□ 1.66
ATG4B-221ENST00000483778 KCNQ2O43526 872 aa25.4■■□□□ 1.66
ATG4B-221ENST00000483778 RGPD3A6NKT7 1758 aaPredicted RBP25.4■■□□□ 1.66
ATG4B-221ENST00000483778 RGPD4Q7Z3J3 1758 aa25.4■■□□□ 1.66
ATG4B-221ENST00000483778 BCL9O00512 1426 aa25.38■■□□□ 1.65
ATG4B-221ENST00000483778 ANO8Q9HCE9 1232 aaPredicted RBP25.38■■□□□ 1.65
ATG4B-221ENST00000483778 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
ATG4B-221ENST00000483778 PDGFDQ9GZP0 370 aaPredicted RBP25.36■■□□□ 1.65
ATG4B-221ENST00000483778 IP6K1Q92551 441 aa25.35■■□□□ 1.65
ATG4B-221ENST00000483778 LTV1Q96GA3 475 aaPredicted RBP25.35■■□□□ 1.65
ATG4B-221ENST00000483778 ACSBG1Q96GR2 724 aa25.35■■□□□ 1.65
ATG4B-221ENST00000483778 TNS2Q63HR2 1409 aa25.35■■□□□ 1.65
ATG4B-221ENST00000483778 USP47Q96K76 1375 aa25.33■■□□□ 1.65
ATG4B-221ENST00000483778 IL2RBP14784 551 aa25.33■■□□□ 1.65
ATG4B-221ENST00000483778 MAP3K19Q56UN5 1328 aa25.32■■□□□ 1.64
ATG4B-221ENST00000483778 NINLQ9Y2I6 1382 aa25.31■■□□□ 1.64
ATG4B-221ENST00000483778 COG3Q96JB2 828 aa25.31■■□□□ 1.64
ATG4B-221ENST00000483778 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
ATG4B-221ENST00000483778 TXNRD1Q16881 649 aa25.3■■□□□ 1.64
ATG4B-221ENST00000483778 ANKRD36BQ8N2N9 1353 aa25.3■■□□□ 1.64
ATG4B-221ENST00000483778 CASZ1Q86V15 1759 aa25.29■■□□□ 1.64
ATG4B-221ENST00000483778 FYB1O15117 783 aa25.29■■□□□ 1.64
ATG4B-221ENST00000483778 BTAF1O14981 1849 aa25.28■■□□□ 1.64
ATG4B-221ENST00000483778 HOXC9P31274 260 aa25.28■■□□□ 1.64
ATG4B-221ENST00000483778 TMF1P82094 1093 aa25.28■■□□□ 1.64
ATG4B-221ENST00000483778 GGNBP2Q9H3C7 697 aa25.28■■□□□ 1.64
ATG4B-221ENST00000483778 SLC24A1O60721 1099 aa25.26■■□□□ 1.63
ATG4B-221ENST00000483778 RRS1Q15050 365 aaKnown RBP25.26■■□□□ 1.63
ATG4B-221ENST00000483778 SPON1Q9HCB6 807 aa25.26■■□□□ 1.63
ATG4B-221ENST00000483778 AMPHP49418 695 aa25.25■■□□□ 1.63
ATG4B-221ENST00000483778 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
ATG4B-221ENST00000483778 FAM208AQ9UK61 1670 aaKnown RBP25.25■■□□□ 1.63
ATG4B-221ENST00000483778 DDX54Q8TDD1 881 aaKnown RBP25.24■■□□□ 1.63
ATG4B-221ENST00000483778 CARD14Q9BXL6 1004 aa25.24■■□□□ 1.63
ATG4B-221ENST00000483778 KIF20BQ96Q89 1820 aa25.21■■□□□ 1.63
ATG4B-221ENST00000483778 SHANK3Q9BYB0 1731 aa25.21■■□□□ 1.63
ATG4B-221ENST00000483778 MYOM1P52179 1685 aa25.21■■□□□ 1.63
ATG4B-221ENST00000483778 ZBTB7AO95365 584 aa25.2■■□□□ 1.62
ATG4B-221ENST00000483778 SLC15A2Q16348 729 aa25.19■■□□□ 1.62
ATG4B-221ENST00000483778 NBPF6Q5VWK0 638 aa25.19■■□□□ 1.62
ATG4B-221ENST00000483778 NBPF4Q96M43 638 aa25.19■■□□□ 1.62
ATG4B-221ENST00000483778 USHBP1Q8N6Y0 703 aa25.18■■□□□ 1.62
ATG4B-221ENST00000483778 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
ATG4B-221ENST00000483778 STK32BQ9NY57 414 aa25.18■■□□□ 1.62
ATG4B-221ENST00000483778 ATF5Q9Y2D1 282 aaPredicted RBP25.18■■□□□ 1.62
ATG4B-221ENST00000483778 PPP1R1BQ9UD71 204 aaPredicted RBP25.17■■□□□ 1.62
ATG4B-221ENST00000483778 MEGF6O75095 1541 aa25.16■■□□□ 1.62
ATG4B-221ENST00000483778 PTGER2P43116 358 aa25.15■■□□□ 1.62
ATG4B-221ENST00000483778 HSP90AB2PQ58FF8 381 aa25.15■■□□□ 1.62
ATG4B-221ENST00000483778 PAPPAQ13219 1627 aa25.15■■□□□ 1.62
ATG4B-221ENST00000483778 PRIM1P49642 420 aaKnown RBP25.14■■□□□ 1.62
ATG4B-221ENST00000483778 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
ATG4B-221ENST00000483778 KCNQ4P56696 695 aa25.13■■□□□ 1.61
ATG4B-221ENST00000483778 ZCRB1Q8TBF4 217 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms