RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
VARS-225ENST00000482996 CRB1P82279 1406 aa19.34■□□□□ 0.69
VARS-225ENST00000482996 THSD7AQ9UPZ6 1657 aa19.34■□□□□ 0.69
VARS-225ENST00000482996 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
VARS-225ENST00000482996 USP54Q70EL1 1684 aa19.33■□□□□ 0.69
VARS-225ENST00000482996 TOM1L2Q6ZVM7 507 aa19.33■□□□□ 0.68
VARS-225ENST00000482996 AXIN2Q9Y2T1 843 aa19.33■□□□□ 0.68
VARS-225ENST00000482996 COL18A1P39060 1754 aa19.32■□□□□ 0.68
VARS-225ENST00000482996 WDR17Q8IZU2 1322 aa19.32■□□□□ 0.68
VARS-225ENST00000482996 CSB-PGBD3P0DP91 1061 aa19.32■□□□□ 0.68
VARS-225ENST00000482996 COG3Q96JB2 828 aa19.32■□□□□ 0.68
VARS-225ENST00000482996 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
VARS-225ENST00000482996 OVOS2A0A0J9YW53 1432 aa19.31■□□□□ 0.68
VARS-225ENST00000482996 OVOS2Q6IE36 1432 aa19.31■□□□□ 0.68
VARS-225ENST00000482996 ABCC6O95255 1503 aa19.3■□□□□ 0.68
VARS-225ENST00000482996 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
VARS-225ENST00000482996 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
VARS-225ENST00000482996 FAM196AQ6ZSG2 479 aa19.28■□□□□ 0.68
VARS-225ENST00000482996 CARD10Q9BWT7 1032 aa19.27■□□□□ 0.68
VARS-225ENST00000482996 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
VARS-225ENST00000482996 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
VARS-225ENST00000482996 BAG6P46379 1132 aa19.25■□□□□ 0.67
VARS-225ENST00000482996 CCDC7Q96M83 1385 aa19.24■□□□□ 0.67
VARS-225ENST00000482996 FYB1O15117 783 aa19.24■□□□□ 0.67
VARS-225ENST00000482996 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
VARS-225ENST00000482996 RGPD5Q99666 1765 aa19.24■□□□□ 0.67
VARS-225ENST00000482996 DDB1Q16531 1140 aa19.23■□□□□ 0.67
VARS-225ENST00000482996 IP6K1Q92551 441 aa19.23■□□□□ 0.67
VARS-225ENST00000482996 GGNBP2Q9H3C7 697 aa19.23■□□□□ 0.67
VARS-225ENST00000482996 LTN1O94822 1766 aa19.23■□□□□ 0.67
VARS-225ENST00000482996 ERBB3P21860 1342 aa19.23■□□□□ 0.67
VARS-225ENST00000482996 C11orf95C9JLR9 678 aaPredicted RBP19.22■□□□□ 0.67
VARS-225ENST00000482996 ANKRD24Q8TF21 1146 aa19.22■□□□□ 0.67
VARS-225ENST00000482996 NLRP2Q9NX02 1062 aa19.22■□□□□ 0.67
VARS-225ENST00000482996 PARP4Q9UKK3 1724 aaKnown RBP19.22■□□□□ 0.67
VARS-225ENST00000482996 AMPHP49418 695 aa19.21■□□□□ 0.67
VARS-225ENST00000482996 NSD3Q9BZ95 1437 aa19.21■□□□□ 0.67
VARS-225ENST00000482996 MYOM1P52179 1685 aa19.2■□□□□ 0.66
VARS-225ENST00000482996 TRIM37O94972 964 aa19.2■□□□□ 0.66
VARS-225ENST00000482996 CARD14Q9BXL6 1004 aa19.2■□□□□ 0.66
VARS-225ENST00000482996 MAP3K19Q56UN5 1328 aa19.2■□□□□ 0.66
VARS-225ENST00000482996 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
VARS-225ENST00000482996 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
VARS-225ENST00000482996 EXOC5O00471 708 aa19.17■□□□□ 0.66
VARS-225ENST00000482996 FBLN1P23142 703 aa19.17■□□□□ 0.66
VARS-225ENST00000482996 HOXC9P31274 260 aa19.17■□□□□ 0.66
VARS-225ENST00000482996 LTV1Q96GA3 475 aaPredicted RBP19.17■□□□□ 0.66
VARS-225ENST00000482996 CGNL1Q0VF96 1302 aa19.17■□□□□ 0.66
VARS-225ENST00000482996 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
VARS-225ENST00000482996 KIF20BQ96Q89 1820 aa19.16■□□□□ 0.66
VARS-225ENST00000482996 LRRC37A3O60309 1634 aa19.16■□□□□ 0.66
VARS-225ENST00000482996 EN1Q05925 392 aaPredicted RBP19.16■□□□□ 0.66
VARS-225ENST00000482996 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
VARS-225ENST00000482996 RTL1A6NKG5 1358 aa19.16■□□□□ 0.66
VARS-225ENST00000482996 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
VARS-225ENST00000482996 APBA3O96018 575 aa19.14■□□□□ 0.65
VARS-225ENST00000482996 IL2RBP14784 551 aa19.14■□□□□ 0.65
VARS-225ENST00000482996 MARCH10Q8NA82 808 aaPredicted RBP19.13■□□□□ 0.65
VARS-225ENST00000482996 TNS1Q9HBL0 1735 aaKnown RBP19.12■□□□□ 0.65
VARS-225ENST00000482996 TNS2Q63HR2 1409 aa19.12■□□□□ 0.65
VARS-225ENST00000482996 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
VARS-225ENST00000482996 PANK3Q9H999 370 aa19.11■□□□□ 0.65
VARS-225ENST00000482996 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
VARS-225ENST00000482996 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
VARS-225ENST00000482996 FLT4P35916 1363 aa19.1■□□□□ 0.65
VARS-225ENST00000482996 PARD3Q8TEW0 1356 aa19.1■□□□□ 0.65
VARS-225ENST00000482996 BCL9O00512 1426 aa19.09■□□□□ 0.65
VARS-225ENST00000482996 PEAK1Q9H792 1746 aa19.09■□□□□ 0.65
VARS-225ENST00000482996 EZH2Q15910 746 aaKnown RBP19.09■□□□□ 0.65
VARS-225ENST00000482996 CAMKK2Q96RR4 588 aa19.09■□□□□ 0.65
VARS-225ENST00000482996 INSRP06213 1382 aa19.07■□□□□ 0.64
VARS-225ENST00000482996 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
VARS-225ENST00000482996 BCL11BQ9C0K0 894 aaPredicted RBP19.07■□□□□ 0.64
VARS-225ENST00000482996 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
VARS-225ENST00000482996 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
VARS-225ENST00000482996 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
VARS-225ENST00000482996 NSD2O96028 1365 aa19.05■□□□□ 0.64
VARS-225ENST00000482996 SRCAPQ6ZRS2 3230 aa19.04■□□□□ 0.64
VARS-225ENST00000482996 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
VARS-225ENST00000482996 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
VARS-225ENST00000482996 KNSTRNQ9Y448 316 aa19.04■□□□□ 0.64
VARS-225ENST00000482996 SBF2Q86WG5 1849 aa19.03■□□□□ 0.64
VARS-225ENST00000482996 PLSCR1O15162 318 aa19.02■□□□□ 0.64
VARS-225ENST00000482996 TNNT2P45379 298 aaPredicted RBP19.02■□□□□ 0.64
VARS-225ENST00000482996 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.64
VARS-225ENST00000482996 PSDA5PKW4 1024 aaPredicted RBP19.01■□□□□ 0.63
VARS-225ENST00000482996 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
VARS-225ENST00000482996 ZCRB1Q8TBF4 217 aaKnown RBP19.01■□□□□ 0.63
VARS-225ENST00000482996 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
VARS-225ENST00000482996 POLKQ9UBT6 870 aa19.01■□□□□ 0.63
VARS-225ENST00000482996 WASHC2AQ641Q2 1341 aa19■□□□□ 0.63
VARS-225ENST00000482996 ANKRD26Q9UPS8 1709 aa19■□□□□ 0.63
VARS-225ENST00000482996 NBPF14Q5TI25 921 aa19■□□□□ 0.63
VARS-225ENST00000482996 PTF1AQ7RTS3 328 aa19■□□□□ 0.63
VARS-225ENST00000482996 MORC1Q86VD1 984 aa19■□□□□ 0.63
VARS-225ENST00000482996 RGPD2P0DJD1 1756 aa19■□□□□ 0.63
VARS-225ENST00000482996 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
VARS-225ENST00000482996 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
VARS-225ENST00000482996 ACSBG1Q96GR2 724 aa18.99■□□□□ 0.63
VARS-225ENST00000482996 MEGF6O75095 1541 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms