RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
UPF3A-207ENST00000481131 RPIAP49247 311 aa9.61□□□□□ -0.87
UPF3A-207ENST00000481131 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
UPF3A-207ENST00000481131 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
UPF3A-207ENST00000481131 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
UPF3A-207ENST00000481131 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
UPF3A-207ENST00000481131 MAGEB6P1A0A0J9YX57 407 aa9.6□□□□□ -0.87
UPF3A-207ENST00000481131 SKIP12755 728 aa9.6□□□□□ -0.87
UPF3A-207ENST00000481131 FOXC1Q12948 553 aa9.6□□□□□ -0.87
UPF3A-207ENST00000481131 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
UPF3A-207ENST00000481131 USP17L5A8MUK1 530 aa9.59□□□□□ -0.87
UPF3A-207ENST00000481131 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
UPF3A-207ENST00000481131 ZBTB33Q86T24 672 aa9.59□□□□□ -0.87
UPF3A-207ENST00000481131 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
UPF3A-207ENST00000481131 SH3BP2P78314 561 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 PLEKHM2Q8IWE5 1019 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 CHIC2Q9UKJ5 165 aa9.58□□□□□ -0.88
UPF3A-207ENST00000481131 ATG7O95352 703 aa9.57□□□□□ -0.88
UPF3A-207ENST00000481131 TRIM32Q13049 653 aa9.57□□□□□ -0.88
UPF3A-207ENST00000481131 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
UPF3A-207ENST00000481131 BPHLQ86WA6 291 aaPredicted RBP9.57□□□□□ -0.88
UPF3A-207ENST00000481131 DEPDC4Q8N2C3 294 aa9.57□□□□□ -0.88
UPF3A-207ENST00000481131 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
UPF3A-207ENST00000481131 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
UPF3A-207ENST00000481131 DGAT1O75907 488 aa9.56□□□□□ -0.88
UPF3A-207ENST00000481131 SKOR1P84550 965 aa9.56□□□□□ -0.88
UPF3A-207ENST00000481131 MYT1Q01538 1121 aa9.56□□□□□ -0.88
UPF3A-207ENST00000481131 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
UPF3A-207ENST00000481131 DZIP3Q86Y13 1208 aaKnown RBP9.56□□□□□ -0.88
UPF3A-207ENST00000481131 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
UPF3A-207ENST00000481131 AGERQ15109 404 aa9.55□□□□□ -0.88
UPF3A-207ENST00000481131 PLPP7Q8NBV4 271 aa9.55□□□□□ -0.88
UPF3A-207ENST00000481131 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
UPF3A-207ENST00000481131 VRTNQ9H8Y1 702 aa9.55□□□□□ -0.88
UPF3A-207ENST00000481131 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
UPF3A-207ENST00000481131 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
UPF3A-207ENST00000481131 NCOA4Q13772 614 aa9.54□□□□□ -0.88
UPF3A-207ENST00000481131 CCDC85AQ96PX6 553 aaPredicted RBP9.54□□□□□ -0.88
UPF3A-207ENST00000481131 PODXL2Q9NZ53 605 aa9.54□□□□□ -0.88
UPF3A-207ENST00000481131 GIGYF1O75420 1035 aaPredicted RBP9.53□□□□□ -0.88
UPF3A-207ENST00000481131 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
UPF3A-207ENST00000481131 TMEM88BA6NKF7 163 aa9.52□□□□□ -0.89
UPF3A-207ENST00000481131 CSB-PGBD3P0DP91 1061 aa9.52□□□□□ -0.89
UPF3A-207ENST00000481131 TRMT44Q8IYL2 757 aaKnown RBP9.52□□□□□ -0.89
UPF3A-207ENST00000481131 TOR4AQ9NXH8 423 aa9.52□□□□□ -0.89
UPF3A-207ENST00000481131 ZMIZ1Q9ULJ6 1067 aa9.52□□□□□ -0.89
UPF3A-207ENST00000481131 USTQ9Y2C2 406 aa9.52□□□□□ -0.89
UPF3A-207ENST00000481131 FAM187AA6NFU0 413 aa9.51□□□□□ -0.89
UPF3A-207ENST00000481131 SLC10A4Q96EP9 437 aa9.51□□□□□ -0.89
UPF3A-207ENST00000481131 MKRN1Q9UHC7 482 aaKnown RBP9.51□□□□□ -0.89
UPF3A-207ENST00000481131 ESPNB1AK53 854 aa9.5□□□□□ -0.89
UPF3A-207ENST00000481131 MAP7D1Q3KQU3 841 aa9.5□□□□□ -0.89
UPF3A-207ENST00000481131 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
UPF3A-207ENST00000481131 CRTC2Q53ET0 693 aaPredicted RBP9.5□□□□□ -0.89
UPF3A-207ENST00000481131 MRGPRX2Q96LB1 330 aa9.5□□□□□ -0.89
UPF3A-207ENST00000481131 WNT7AO00755 349 aa9.49□□□□□ -0.89
UPF3A-207ENST00000481131 ELOAQ14241 798 aaKnown RBP9.49□□□□□ -0.89
UPF3A-207ENST00000481131 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
UPF3A-207ENST00000481131 POTECB2RU33 542 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L15C9J2P7 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L13C9JLJ4 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L12C9JPN9 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L11C9JVI0 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L21D6R901 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L18D6R9N7 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L22D6RA61 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L17D6RBQ6 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L19D6RCP7 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L20D6RJB6 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 WNT7BP56706 349 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 USP17L24Q0WX57 530 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-207ENST00000481131 DOLKQ9UPQ8 538 aa9.48□□□□□ -0.89
UPF3A-207ENST00000481131 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
UPF3A-207ENST00000481131 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
UPF3A-207ENST00000481131 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
UPF3A-207ENST00000481131 PTK7Q13308 1070 aa9.47□□□□□ -0.89
UPF3A-207ENST00000481131 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
UPF3A-207ENST00000481131 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
UPF3A-207ENST00000481131 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
UPF3A-207ENST00000481131 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 J3QL48 77 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 RASA1P20936 1047 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 CLDN10P78369 228 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 PDE4CQ08493 712 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 EML3Q32P44 896 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
UPF3A-207ENST00000481131 ZNF775Q96BV0 537 aaPredicted RBP9.46□□□□□ -0.9
UPF3A-207ENST00000481131 ATP5J2-PTCD1G3V325 749 aa9.45□□□□□ -0.9
UPF3A-207ENST00000481131 SMPD1P17405 629 aa9.45□□□□□ -0.9
UPF3A-207ENST00000481131 VARSP26640 1264 aaKnown RBP9.45□□□□□ -0.9
UPF3A-207ENST00000481131 OXLD1Q5BKU9 147 aa9.45□□□□□ -0.9
UPF3A-207ENST00000481131 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms