RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 PROM2Q8N271 834 aa19.05■□□□□ 0.64
PTPN7-212ENST00000480836 LRRC37A3O60309 1634 aa19.04■□□□□ 0.64
PTPN7-212ENST00000480836 DDB1Q16531 1140 aa19.03■□□□□ 0.64
PTPN7-212ENST00000480836 NME9Q86XW9 330 aa19.03■□□□□ 0.64
PTPN7-212ENST00000480836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPN7-212ENST00000480836 SLC12A5Q9H2X9 1139 aa19.03■□□□□ 0.64
PTPN7-212ENST00000480836 NFAT5O94916 1531 aa19.03■□□□□ 0.64
PTPN7-212ENST00000480836 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
PTPN7-212ENST00000480836 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
PTPN7-212ENST00000480836 PDGFDQ9GZP0 370 aaPredicted RBP19.02■□□□□ 0.64
PTPN7-212ENST00000480836 SBF2Q86WG5 1849 aa19.02■□□□□ 0.63
PTPN7-212ENST00000480836 TTC21AQ8NDW8 1320 aa19.01■□□□□ 0.63
PTPN7-212ENST00000480836 SBNO2Q9Y2G9 1366 aa19.01■□□□□ 0.63
PTPN7-212ENST00000480836 KCNH5Q8NCM2 988 aa19■□□□□ 0.63
PTPN7-212ENST00000480836 CARD11Q9BXL7 1154 aa19■□□□□ 0.63
PTPN7-212ENST00000480836 OVOS2A0A0G2JMS6 1433 aa19■□□□□ 0.63
PTPN7-212ENST00000480836 OVOS2A0A0J9YW53 1432 aa19■□□□□ 0.63
PTPN7-212ENST00000480836 OVOS2Q6IE36 1432 aa19■□□□□ 0.63
PTPN7-212ENST00000480836 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
PTPN7-212ENST00000480836 ANO8Q9HCE9 1232 aaPredicted RBP18.99■□□□□ 0.63
PTPN7-212ENST00000480836 USP31Q70CQ4 1352 aa18.98■□□□□ 0.63
PTPN7-212ENST00000480836 MON2Q7Z3U7 1717 aa18.98■□□□□ 0.63
PTPN7-212ENST00000480836 PLSCR1O15162 318 aa18.98■□□□□ 0.63
PTPN7-212ENST00000480836 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
PTPN7-212ENST00000480836 KCNQ2O43526 872 aa18.97■□□□□ 0.63
PTPN7-212ENST00000480836 BCL11BQ9C0K0 894 aaPredicted RBP18.97■□□□□ 0.63
PTPN7-212ENST00000480836 CSB-PGBD3P0DP91 1061 aa18.96■□□□□ 0.63
PTPN7-212ENST00000480836 TMC1Q8TDI8 760 aa18.96■□□□□ 0.63
PTPN7-212ENST00000480836 FBLN1P23142 703 aa18.95■□□□□ 0.62
PTPN7-212ENST00000480836 NBPF14Q5TI25 921 aa18.95■□□□□ 0.62
PTPN7-212ENST00000480836 TESK2Q96S53 571 aa18.95■□□□□ 0.62
PTPN7-212ENST00000480836 BCL9O00512 1426 aa18.92■□□□□ 0.62
PTPN7-212ENST00000480836 EXOC5O00471 708 aa18.92■□□□□ 0.62
PTPN7-212ENST00000480836 CDCA7Q9BWT1 371 aaPredicted RBP18.92■□□□□ 0.62
PTPN7-212ENST00000480836 A0A1W2PP64 1363 aa18.92■□□□□ 0.62
PTPN7-212ENST00000480836 ERBB3P21860 1342 aa18.91■□□□□ 0.62
PTPN7-212ENST00000480836 USP54Q70EL1 1684 aa18.9■□□□□ 0.62
PTPN7-212ENST00000480836 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
PTPN7-212ENST00000480836 C11orf95C9JLR9 678 aaPredicted RBP18.9■□□□□ 0.62
PTPN7-212ENST00000480836 TXNRD1Q16881 649 aa18.9■□□□□ 0.62
PTPN7-212ENST00000480836 ACSBG1Q96GR2 724 aa18.9■□□□□ 0.62
PTPN7-212ENST00000480836 NLRP2Q9NX02 1062 aa18.9■□□□□ 0.62
PTPN7-212ENST00000480836 CCDC7Q96M83 1385 aa18.89■□□□□ 0.61
PTPN7-212ENST00000480836 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
PTPN7-212ENST00000480836 SPON1Q9HCB6 807 aa18.88■□□□□ 0.61
PTPN7-212ENST00000480836 TONSLQ96HA7 1378 aa18.88■□□□□ 0.61
PTPN7-212ENST00000480836 LTN1O94822 1766 aa18.88■□□□□ 0.61
PTPN7-212ENST00000480836 RGPD3A6NKT7 1758 aaPredicted RBP18.87■□□□□ 0.61
PTPN7-212ENST00000480836 RGPD4Q7Z3J3 1758 aa18.87■□□□□ 0.61
PTPN7-212ENST00000480836 HDGFL2Q7Z4V5 671 aaPredicted RBP18.87■□□□□ 0.61
PTPN7-212ENST00000480836 CASZ1Q86V15 1759 aa18.87■□□□□ 0.61
PTPN7-212ENST00000480836 EDC4Q6P2E9 1401 aaKnown RBP18.86■□□□□ 0.61
PTPN7-212ENST00000480836 ABCC6O95255 1503 aa18.85■□□□□ 0.61
PTPN7-212ENST00000480836 TNS2Q63HR2 1409 aa18.85■□□□□ 0.61
PTPN7-212ENST00000480836 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
PTPN7-212ENST00000480836 PTGER2P43116 358 aa18.85■□□□□ 0.61
PTPN7-212ENST00000480836 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
PTPN7-212ENST00000480836 IL2RBP14784 551 aa18.84■□□□□ 0.61
PTPN7-212ENST00000480836 IP6K1Q92551 441 aa18.84■□□□□ 0.61
PTPN7-212ENST00000480836 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
PTPN7-212ENST00000480836 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
PTPN7-212ENST00000480836 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.6
PTPN7-212ENST00000480836 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
PTPN7-212ENST00000480836 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
PTPN7-212ENST00000480836 MAP3K19Q56UN5 1328 aa18.81■□□□□ 0.6
PTPN7-212ENST00000480836 NHSQ6T4R5 1651 aa18.79■□□□□ 0.6
PTPN7-212ENST00000480836 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
PTPN7-212ENST00000480836 PPP1R1BQ9UD71 204 aaPredicted RBP18.79■□□□□ 0.6
PTPN7-212ENST00000480836 HOXC9P31274 260 aa18.78■□□□□ 0.6
PTPN7-212ENST00000480836 KCNQ4P56696 695 aa18.78■□□□□ 0.6
PTPN7-212ENST00000480836 ZNF827Q17R98 1081 aa18.78■□□□□ 0.6
PTPN7-212ENST00000480836 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
PTPN7-212ENST00000480836 FYB1O15117 783 aa18.77■□□□□ 0.6
PTPN7-212ENST00000480836 STK32BQ9NY57 414 aa18.77■□□□□ 0.6
PTPN7-212ENST00000480836 RGPD2P0DJD1 1756 aa18.77■□□□□ 0.6
PTPN7-212ENST00000480836 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
PTPN7-212ENST00000480836 GGNBP2Q9H3C7 697 aa18.76■□□□□ 0.59
PTPN7-212ENST00000480836 BTAF1O14981 1849 aa18.76■□□□□ 0.59
PTPN7-212ENST00000480836 MYOM1P52179 1685 aa18.76■□□□□ 0.59
PTPN7-212ENST00000480836 PAPPAQ13219 1627 aa18.75■□□□□ 0.59
PTPN7-212ENST00000480836 COG3Q96JB2 828 aa18.75■□□□□ 0.59
PTPN7-212ENST00000480836 FAM208AQ9UK61 1670 aaKnown RBP18.74■□□□□ 0.59
PTPN7-212ENST00000480836 NINLQ9Y2I6 1382 aa18.74■□□□□ 0.59
PTPN7-212ENST00000480836 NBPF6Q5VWK0 638 aa18.74■□□□□ 0.59
PTPN7-212ENST00000480836 NBPF4Q96M43 638 aa18.74■□□□□ 0.59
PTPN7-212ENST00000480836 CARD14Q9BXL6 1004 aa18.73■□□□□ 0.59
PTPN7-212ENST00000480836 ANKRD36BQ8N2N9 1353 aa18.72■□□□□ 0.59
PTPN7-212ENST00000480836 YY1P25490 414 aa18.72■□□□□ 0.59
PTPN7-212ENST00000480836 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
PTPN7-212ENST00000480836 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
PTPN7-212ENST00000480836 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
PTPN7-212ENST00000480836 MEGF6O75095 1541 aa18.72■□□□□ 0.59
PTPN7-212ENST00000480836 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
PTPN7-212ENST00000480836 NSD2O96028 1365 aa18.71■□□□□ 0.59
PTPN7-212ENST00000480836 AMPHP49418 695 aa18.71■□□□□ 0.59
PTPN7-212ENST00000480836 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
PTPN7-212ENST00000480836 SYT17Q9BSW7 474 aa18.71■□□□□ 0.59
PTPN7-212ENST00000480836 FHDC1Q9C0D6 1143 aaPredicted RBP18.71■□□□□ 0.59
PTPN7-212ENST00000480836 SHANK3Q9BYB0 1731 aa18.71■□□□□ 0.59
PTPN7-212ENST00000480836 USP47Q96K76 1375 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms