RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PARD3Q8TEW0 1356 aa26.74■■□□□ 1.87
ABCF3-214ENST00000480562 TMC1Q8TDI8 760 aa26.74■■□□□ 1.87
ABCF3-214ENST00000480562 MON2Q7Z3U7 1717 aa26.73■■□□□ 1.87
ABCF3-214ENST00000480562 DDB1Q16531 1140 aa26.73■■□□□ 1.87
ABCF3-214ENST00000480562 NFAT5O94916 1531 aa26.73■■□□□ 1.87
ABCF3-214ENST00000480562 RGPD5Q99666 1765 aa26.73■■□□□ 1.87
ABCF3-214ENST00000480562 LRRC37A3O60309 1634 aa26.72■■□□□ 1.87
ABCF3-214ENST00000480562 CSB-PGBD3P0DP91 1061 aa26.72■■□□□ 1.87
ABCF3-214ENST00000480562 CD163L1Q9NR16 1453 aa26.72■■□□□ 1.87
ABCF3-214ENST00000480562 NME9Q86XW9 330 aa26.71■■□□□ 1.87
ABCF3-214ENST00000480562 SLC12A5Q9H2X9 1139 aa26.71■■□□□ 1.87
ABCF3-214ENST00000480562 OVOS2A0A0G2JMS6 1433 aa26.71■■□□□ 1.87
ABCF3-214ENST00000480562 OVOS2A0A0J9YW53 1432 aa26.71■■□□□ 1.87
ABCF3-214ENST00000480562 OVOS2Q6IE36 1432 aa26.71■■□□□ 1.87
ABCF3-214ENST00000480562 PEAK1Q9H792 1746 aa26.7■■□□□ 1.86
ABCF3-214ENST00000480562 RREB1Q92766 1687 aa26.7■■□□□ 1.86
ABCF3-214ENST00000480562 C11orf95C9JLR9 678 aaPredicted RBP26.68■■□□□ 1.86
ABCF3-214ENST00000480562 CARD10Q9BWT7 1032 aa26.68■■□□□ 1.86
ABCF3-214ENST00000480562 USP31Q70CQ4 1352 aa26.68■■□□□ 1.86
ABCF3-214ENST00000480562 HDGFL2Q7Z4V5 671 aaPredicted RBP26.67■■□□□ 1.86
ABCF3-214ENST00000480562 NUP188Q5SRE5 1749 aa26.67■■□□□ 1.86
ABCF3-214ENST00000480562 WNK3Q9BYP7 1800 aa26.67■■□□□ 1.86
ABCF3-214ENST00000480562 MARCH10Q8NA82 808 aaPredicted RBP26.66■■□□□ 1.86
ABCF3-214ENST00000480562 CDCA7Q9BWT1 371 aaPredicted RBP26.66■■□□□ 1.86
ABCF3-214ENST00000480562 NBPF14Q5TI25 921 aa26.64■■□□□ 1.86
ABCF3-214ENST00000480562 PTF1AQ7RTS3 328 aa26.64■■□□□ 1.86
ABCF3-214ENST00000480562 SBF2Q86WG5 1849 aa26.62■■□□□ 1.85
ABCF3-214ENST00000480562 A0A1W2PP64 1363 aa26.62■■□□□ 1.85
ABCF3-214ENST00000480562 TERF2IPQ9NYB0 399 aa26.62■■□□□ 1.85
ABCF3-214ENST00000480562 USP54Q70EL1 1684 aa26.61■■□□□ 1.85
ABCF3-214ENST00000480562 EDC4Q6P2E9 1401 aaKnown RBP26.61■■□□□ 1.85
ABCF3-214ENST00000480562 ABCC6O95255 1503 aa26.6■■□□□ 1.85
ABCF3-214ENST00000480562 CCDC7Q96M83 1385 aa26.6■■□□□ 1.85
ABCF3-214ENST00000480562 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
ABCF3-214ENST00000480562 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
ABCF3-214ENST00000480562 TESK2Q96S53 571 aa26.6■■□□□ 1.85
ABCF3-214ENST00000480562 BCL11BQ9C0K0 894 aaPredicted RBP26.6■■□□□ 1.85
ABCF3-214ENST00000480562 EXOC5O00471 708 aa26.59■■□□□ 1.85
ABCF3-214ENST00000480562 PUS7Q96PZ0 661 aaKnown RBP26.59■■□□□ 1.85
ABCF3-214ENST00000480562 NLRP2Q9NX02 1062 aa26.58■■□□□ 1.85
ABCF3-214ENST00000480562 LTN1O94822 1766 aa26.57■■□□□ 1.84
ABCF3-214ENST00000480562 PLSCR1O15162 318 aa26.57■■□□□ 1.84
ABCF3-214ENST00000480562 ERBB3P21860 1342 aa26.57■■□□□ 1.84
ABCF3-214ENST00000480562 BCL9O00512 1426 aa26.56■■□□□ 1.84
ABCF3-214ENST00000480562 ANKRD24Q8TF21 1146 aa26.54■■□□□ 1.84
ABCF3-214ENST00000480562 TNS2Q63HR2 1409 aa26.53■■□□□ 1.84
ABCF3-214ENST00000480562 RGPD3A6NKT7 1758 aaPredicted RBP26.53■■□□□ 1.84
ABCF3-214ENST00000480562 RGPD4Q7Z3J3 1758 aa26.53■■□□□ 1.84
ABCF3-214ENST00000480562 PROM2Q8N271 834 aa26.52■■□□□ 1.84
ABCF3-214ENST00000480562 ANO8Q9HCE9 1232 aaPredicted RBP26.51■■□□□ 1.83
ABCF3-214ENST00000480562 NINLQ9Y2I6 1382 aa26.49■■□□□ 1.83
ABCF3-214ENST00000480562 KCNQ2O43526 872 aa26.49■■□□□ 1.83
ABCF3-214ENST00000480562 IL2RBP14784 551 aa26.49■■□□□ 1.83
ABCF3-214ENST00000480562 IP6K1Q92551 441 aa26.47■■□□□ 1.83
ABCF3-214ENST00000480562 LTV1Q96GA3 475 aaPredicted RBP26.47■■□□□ 1.83
ABCF3-214ENST00000480562 SLC24A1O60721 1099 aa26.46■■□□□ 1.83
ABCF3-214ENST00000480562 ACSBG1Q96GR2 724 aa26.46■■□□□ 1.83
ABCF3-214ENST00000480562 COG3Q96JB2 828 aa26.46■■□□□ 1.83
ABCF3-214ENST00000480562 SPON1Q9HCB6 807 aa26.46■■□□□ 1.83
ABCF3-214ENST00000480562 FBLN1P23142 703 aa26.45■■□□□ 1.82
ABCF3-214ENST00000480562 TXNRD1Q16881 649 aa26.45■■□□□ 1.82
ABCF3-214ENST00000480562 USP47Q96K76 1375 aa26.45■■□□□ 1.82
ABCF3-214ENST00000480562 TMF1P82094 1093 aa26.42■■□□□ 1.82
ABCF3-214ENST00000480562 PDGFDQ9GZP0 370 aaPredicted RBP26.42■■□□□ 1.82
ABCF3-214ENST00000480562 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
ABCF3-214ENST00000480562 MAP3K19Q56UN5 1328 aa26.41■■□□□ 1.82
ABCF3-214ENST00000480562 PPP1R1BQ9UD71 204 aaPredicted RBP26.41■■□□□ 1.82
ABCF3-214ENST00000480562 NHSQ6T4R5 1651 aa26.41■■□□□ 1.82
ABCF3-214ENST00000480562 HOXC9P31274 260 aa26.39■■□□□ 1.82
ABCF3-214ENST00000480562 AMPHP49418 695 aa26.39■■□□□ 1.82
ABCF3-214ENST00000480562 STK32BQ9NY57 414 aa26.38■■□□□ 1.81
ABCF3-214ENST00000480562 CASZ1Q86V15 1759 aa26.38■■□□□ 1.81
ABCF3-214ENST00000480562 DDX54Q8TDD1 881 aaKnown RBP26.36■■□□□ 1.81
ABCF3-214ENST00000480562 GGNBP2Q9H3C7 697 aa26.36■■□□□ 1.81
ABCF3-214ENST00000480562 FYB1O15117 783 aa26.35■■□□□ 1.81
ABCF3-214ENST00000480562 ZBTB7AO95365 584 aa26.35■■□□□ 1.81
ABCF3-214ENST00000480562 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
ABCF3-214ENST00000480562 SLC15A2Q16348 729 aa26.35■■□□□ 1.81
ABCF3-214ENST00000480562 FAM208AQ9UK61 1670 aaKnown RBP26.34■■□□□ 1.81
ABCF3-214ENST00000480562 KAT6BQ8WYB5 2073 aa26.34■■□□□ 1.81
ABCF3-214ENST00000480562 BTAF1O14981 1849 aa26.32■■□□□ 1.8
ABCF3-214ENST00000480562 RGPD2P0DJD1 1756 aa26.31■■□□□ 1.8
ABCF3-214ENST00000480562 ATF5Q9Y2D1 282 aaPredicted RBP26.31■■□□□ 1.8
ABCF3-214ENST00000480562 CDCA8Q53HL2 280 aa26.3■■□□□ 1.8
ABCF3-214ENST00000480562 PCGF6Q9BYE7 350 aa26.28■■□□□ 1.8
ABCF3-214ENST00000480562 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
ABCF3-214ENST00000480562 PTGER2P43116 358 aa26.27■■□□□ 1.8
ABCF3-214ENST00000480562 NBPF6Q5VWK0 638 aa26.27■■□□□ 1.8
ABCF3-214ENST00000480562 NBPF4Q96M43 638 aa26.27■■□□□ 1.8
ABCF3-214ENST00000480562 MEGF6O75095 1541 aa26.27■■□□□ 1.8
ABCF3-214ENST00000480562 USHBP1Q8N6Y0 703 aa26.26■■□□□ 1.79
ABCF3-214ENST00000480562 ZCRB1Q8TBF4 217 aaKnown RBP26.26■■□□□ 1.79
ABCF3-214ENST00000480562 LRRC4BQ9NT99 713 aa26.26■■□□□ 1.79
ABCF3-214ENST00000480562 SYTL4Q96C24 671 aaPredicted RBP26.25■■□□□ 1.79
ABCF3-214ENST00000480562 PAPPAQ13219 1627 aa26.25■■□□□ 1.79
ABCF3-214ENST00000480562 KIF20BQ96Q89 1820 aa26.24■■□□□ 1.79
ABCF3-214ENST00000480562 PRIM1P49642 420 aaKnown RBP26.24■■□□□ 1.79
ABCF3-214ENST00000480562 ZNF827Q17R98 1081 aa26.24■■□□□ 1.79
ABCF3-214ENST00000480562 CARD14Q9BXL6 1004 aa26.24■■□□□ 1.79
ABCF3-214ENST00000480562 MYOM1P52179 1685 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms