RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
GCA-208ENST00000479199 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
GCA-208ENST00000479199 TOM1L2Q6ZVM7 507 aa17.27■□□□□ 0.36
GCA-208ENST00000479199 WDR17Q8IZU2 1322 aa17.26■□□□□ 0.35
GCA-208ENST00000479199 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
GCA-208ENST00000479199 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
GCA-208ENST00000479199 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
GCA-208ENST00000479199 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
GCA-208ENST00000479199 SOX12O15370 315 aa17.25■□□□□ 0.35
GCA-208ENST00000479199 DDB1Q16531 1140 aa17.25■□□□□ 0.35
GCA-208ENST00000479199 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
GCA-208ENST00000479199 ABCC6O95255 1503 aa17.25■□□□□ 0.35
GCA-208ENST00000479199 MYOM1P52179 1685 aa17.23■□□□□ 0.35
GCA-208ENST00000479199 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
GCA-208ENST00000479199 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
GCA-208ENST00000479199 ARHGEF25Q86VW2 580 aa17.23■□□□□ 0.35
GCA-208ENST00000479199 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
GCA-208ENST00000479199 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
GCA-208ENST00000479199 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
GCA-208ENST00000479199 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
GCA-208ENST00000479199 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
GCA-208ENST00000479199 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
GCA-208ENST00000479199 BCL9O00512 1426 aa17.21■□□□□ 0.34
GCA-208ENST00000479199 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
GCA-208ENST00000479199 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
GCA-208ENST00000479199 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
GCA-208ENST00000479199 BTAF1O14981 1849 aa17.19■□□□□ 0.34
GCA-208ENST00000479199 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
GCA-208ENST00000479199 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
GCA-208ENST00000479199 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
GCA-208ENST00000479199 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
GCA-208ENST00000479199 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
GCA-208ENST00000479199 PLSCR1O15162 318 aa17.18■□□□□ 0.34
GCA-208ENST00000479199 KCNQ2O43526 872 aa17.18■□□□□ 0.34
GCA-208ENST00000479199 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
GCA-208ENST00000479199 CARD10Q9BWT7 1032 aa17.18■□□□□ 0.34
GCA-208ENST00000479199 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
GCA-208ENST00000479199 NINLQ9Y2I6 1382 aa17.17■□□□□ 0.34
GCA-208ENST00000479199 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
GCA-208ENST00000479199 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
GCA-208ENST00000479199 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
GCA-208ENST00000479199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.344e-7■■■□□ 19
GCA-208ENST00000479199 PROM2Q8N271 834 aa17.15■□□□□ 0.34
GCA-208ENST00000479199 FAM208AQ9UK61 1670 aaKnown RBP17.15■□□□□ 0.34
GCA-208ENST00000479199 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
GCA-208ENST00000479199 NME9Q86XW9 330 aa17.14■□□□□ 0.33
GCA-208ENST00000479199 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
GCA-208ENST00000479199 YY1P25490 414 aa17.12■□□□□ 0.33
GCA-208ENST00000479199 ERBB3P21860 1342 aa17.12■□□□□ 0.33
GCA-208ENST00000479199 EXOC5O00471 708 aa17.11■□□□□ 0.33
GCA-208ENST00000479199 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
GCA-208ENST00000479199 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
GCA-208ENST00000479199 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
GCA-208ENST00000479199 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
GCA-208ENST00000479199 SHANK3Q9BYB0 1731 aa17.1■□□□□ 0.33
GCA-208ENST00000479199 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
GCA-208ENST00000479199 DOT1LQ8TEK3 1739 aa17.1■□□□□ 0.33
GCA-208ENST00000479199 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
GCA-208ENST00000479199 NLRP2Q9NX02 1062 aa17.09■□□□□ 0.33
GCA-208ENST00000479199 STK32BQ9NY57 414 aa17.09■□□□□ 0.33
GCA-208ENST00000479199 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
GCA-208ENST00000479199 CHD4Q14839 1912 aa17.09■□□□□ 0.33
GCA-208ENST00000479199 QSER1Q2KHR3 1735 aa17.08■□□□□ 0.32
GCA-208ENST00000479199 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
GCA-208ENST00000479199 PTGER2P43116 358 aa17.07■□□□□ 0.32
GCA-208ENST00000479199 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
GCA-208ENST00000479199 IL2RBP14784 551 aa17.06■□□□□ 0.32
GCA-208ENST00000479199 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
GCA-208ENST00000479199 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
GCA-208ENST00000479199 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
GCA-208ENST00000479199 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
GCA-208ENST00000479199 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
GCA-208ENST00000479199 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
GCA-208ENST00000479199 LY75O60449 1722 aa17.04■□□□□ 0.32
GCA-208ENST00000479199 COL24A1Q17RW2 1714 aa17.02■□□□□ 0.32
GCA-208ENST00000479199 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
GCA-208ENST00000479199 KIF20BQ96Q89 1820 aa17.02■□□□□ 0.31
GCA-208ENST00000479199 FHDC1Q9C0D6 1143 aaPredicted RBP17.01■□□□□ 0.31
GCA-208ENST00000479199 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
GCA-208ENST00000479199 ZNF827Q17R98 1081 aa17■□□□□ 0.31
GCA-208ENST00000479199 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
GCA-208ENST00000479199 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
GCA-208ENST00000479199 MEGF6O75095 1541 aa16.98■□□□□ 0.31
GCA-208ENST00000479199 IP6K1Q92551 441 aa16.98■□□□□ 0.31
GCA-208ENST00000479199 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
GCA-208ENST00000479199 TESK2Q96S53 571 aa16.97■□□□□ 0.31
GCA-208ENST00000479199 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
GCA-208ENST00000479199 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
GCA-208ENST00000479199 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.31
GCA-208ENST00000479199 FBLN1P23142 703 aa16.95■□□□□ 0.3
GCA-208ENST00000479199 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
GCA-208ENST00000479199 NSD2O96028 1365 aa16.94■□□□□ 0.3
GCA-208ENST00000479199 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
GCA-208ENST00000479199 HOXC9P31274 260 aa16.94■□□□□ 0.3
GCA-208ENST00000479199 COG3Q96JB2 828 aa16.94■□□□□ 0.3
GCA-208ENST00000479199 ARXQ96QS3 562 aa16.94■□□□□ 0.3
GCA-208ENST00000479199 C5P01031 1676 aa16.94■□□□□ 0.3
GCA-208ENST00000479199 TAF1LQ8IZX4 1826 aa16.93■□□□□ 0.3
GCA-208ENST00000479199 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
GCA-208ENST00000479199 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms