RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 DEFB132Q7Z7B7 95 aa20.83■□□□□ 0.93
COL16A1-211ENST00000479100 OVOS2A0A0J9YW53 1432 aa20.83■□□□□ 0.93
COL16A1-211ENST00000479100 OVOS2Q6IE36 1432 aa20.83■□□□□ 0.93
COL16A1-211ENST00000479100 CNGB1Q14028 1251 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-211ENST00000479100 SPATA31A1Q5TZJ5 1347 aa20.81■□□□□ 0.92
COL16A1-211ENST00000479100 KIF20BQ96Q89 1820 aa20.81■□□□□ 0.92
COL16A1-211ENST00000479100 BRWD3Q6RI45 1802 aa20.81■□□□□ 0.92
COL16A1-211ENST00000479100 ZNF316A6NFI3 1004 aaPredicted RBP20.8■□□□□ 0.92
COL16A1-211ENST00000479100 CPDO75976 1380 aa20.8■□□□□ 0.92
COL16A1-211ENST00000479100 FBLN1P23142 703 aa20.79■□□□□ 0.92
COL16A1-211ENST00000479100 ARHGEF25Q86VW2 580 aa20.79■□□□□ 0.92
COL16A1-211ENST00000479100 USP54Q70EL1 1684 aa20.78■□□□□ 0.92
COL16A1-211ENST00000479100 A0A0G2JS52 829 aa20.78■□□□□ 0.92
COL16A1-211ENST00000479100 PER1O15534 1290 aaPredicted RBP20.78■□□□□ 0.92
COL16A1-211ENST00000479100 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
COL16A1-211ENST00000479100 MYT1Q01538 1121 aa20.78■□□□□ 0.92
COL16A1-211ENST00000479100 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
COL16A1-211ENST00000479100 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
COL16A1-211ENST00000479100 STRN4Q9NRL3 753 aa20.77■□□□□ 0.92
COL16A1-211ENST00000479100 NFAT5O94916 1531 aa20.77■□□□□ 0.92
COL16A1-211ENST00000479100 EVA1CP58658 441 aa20.76■□□□□ 0.91
COL16A1-211ENST00000479100 AMER1Q5JTC6 1135 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-211ENST00000479100 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
COL16A1-211ENST00000479100 NSD2O96028 1365 aa20.75■□□□□ 0.91
COL16A1-211ENST00000479100 THSD7AQ9UPZ6 1657 aa20.75■□□□□ 0.91
COL16A1-211ENST00000479100 CAMTA1Q9Y6Y1 1673 aa20.75■□□□□ 0.91
COL16A1-211ENST00000479100 SF3B2Q13435 895 aaKnown RBP20.75■□□□□ 0.91
COL16A1-211ENST00000479100 FAM182BQ5T319 152 aa20.75■□□□□ 0.91
COL16A1-211ENST00000479100 AATKQ6ZMQ8 1374 aa20.74■□□□□ 0.91
COL16A1-211ENST00000479100 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
COL16A1-211ENST00000479100 AMPHP49418 695 aa20.73■□□□□ 0.91
COL16A1-211ENST00000479100 LARP1Q6PKG0 1096 aaKnown RBP20.73■□□□□ 0.91
COL16A1-211ENST00000479100 BARGINQ6ZT62 677 aa20.73■□□□□ 0.91
COL16A1-211ENST00000479100 MAP3K19Q56UN5 1328 aa20.73■□□□□ 0.91
COL16A1-211ENST00000479100 AXIN2Q9Y2T1 843 aa20.72■□□□□ 0.91
COL16A1-211ENST00000479100 PPM1GO15355 546 aaPredicted RBP20.71■□□□□ 0.91
COL16A1-211ENST00000479100 USP35Q9P2H5 1018 aa20.7■□□□□ 0.9
COL16A1-211ENST00000479100 LMO7Q8WWI1 1683 aa20.7■□□□□ 0.9
COL16A1-211ENST00000479100 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
COL16A1-211ENST00000479100 BAG6P46379 1132 aa20.69■□□□□ 0.9
COL16A1-211ENST00000479100 ANKRD26Q9UPS8 1709 aa20.69■□□□□ 0.9
COL16A1-211ENST00000479100 LTN1O94822 1766 aa20.68■□□□□ 0.9
COL16A1-211ENST00000479100 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
COL16A1-211ENST00000479100 IP6K1Q92551 441 aa20.68■□□□□ 0.9
COL16A1-211ENST00000479100 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
COL16A1-211ENST00000479100 HOXC9P31274 260 aa20.67■□□□□ 0.9
COL16A1-211ENST00000479100 LTV1Q96GA3 475 aaPredicted RBP20.67■□□□□ 0.9
COL16A1-211ENST00000479100 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
COL16A1-211ENST00000479100 COL5A2P05997 1499 aaPredicted RBP20.67■□□□□ 0.9
COL16A1-211ENST00000479100 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-211ENST00000479100 FAM196AQ6ZSG2 479 aa20.66■□□□□ 0.9
COL16A1-211ENST00000479100 THRAP3Q9Y2W1 955 aaKnown RBP20.66■□□□□ 0.9
COL16A1-211ENST00000479100 NPC1L1Q9UHC9 1359 aa20.66■□□□□ 0.9
COL16A1-211ENST00000479100 COL18A1P39060 1754 aa20.66■□□□□ 0.9
COL16A1-211ENST00000479100 TOM1L2Q6ZVM7 507 aa20.65■□□□□ 0.9
COL16A1-211ENST00000479100 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
COL16A1-211ENST00000479100 POLKQ9UBT6 870 aa20.65■□□□□ 0.9
COL16A1-211ENST00000479100 RTL1A6NKG5 1358 aa20.63■□□□□ 0.89
COL16A1-211ENST00000479100 RGPD5Q99666 1765 aa20.63■□□□□ 0.89
COL16A1-211ENST00000479100 ABCC6O95255 1503 aa20.63■□□□□ 0.89
COL16A1-211ENST00000479100 FLT4P35916 1363 aa20.62■□□□□ 0.89
COL16A1-211ENST00000479100 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
COL16A1-211ENST00000479100 TRIM37O94972 964 aa20.62■□□□□ 0.89
COL16A1-211ENST00000479100 HSP90AB2PQ58FF8 381 aa20.62■□□□□ 0.89
COL16A1-211ENST00000479100 CRB1P82279 1406 aa20.61■□□□□ 0.89
COL16A1-211ENST00000479100 PDE3BQ13370 1112 aa20.61■□□□□ 0.89
COL16A1-211ENST00000479100 CAMKK2Q96RR4 588 aa20.61■□□□□ 0.89
COL16A1-211ENST00000479100 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
COL16A1-211ENST00000479100 ERBB3P21860 1342 aa20.6■□□□□ 0.89
COL16A1-211ENST00000479100 MAP2P11137 1827 aaKnown RBP20.6■□□□□ 0.89
COL16A1-211ENST00000479100 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
COL16A1-211ENST00000479100 PEAK1Q9H792 1746 aa20.59■□□□□ 0.89
COL16A1-211ENST00000479100 EZH2Q15910 746 aaKnown RBP20.59■□□□□ 0.89
COL16A1-211ENST00000479100 INSRP06213 1382 aa20.59■□□□□ 0.89
COL16A1-211ENST00000479100 PSDA5PKW4 1024 aaPredicted RBP20.57■□□□□ 0.88
COL16A1-211ENST00000479100 MTHFSP49914 203 aa20.57■□□□□ 0.88
COL16A1-211ENST00000479100 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
COL16A1-211ENST00000479100 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
COL16A1-211ENST00000479100 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
COL16A1-211ENST00000479100 APBA3O96018 575 aa20.55■□□□□ 0.88
COL16A1-211ENST00000479100 TNS1Q9HBL0 1735 aaKnown RBP20.54■□□□□ 0.88
COL16A1-211ENST00000479100 PARD3Q8TEW0 1356 aa20.54■□□□□ 0.88
COL16A1-211ENST00000479100 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
COL16A1-211ENST00000479100 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
COL16A1-211ENST00000479100 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
COL16A1-211ENST00000479100 R3HDM1Q15032 1099 aaKnown RBP20.51■□□□□ 0.87
COL16A1-211ENST00000479100 RALBP1Q15311 655 aa20.51■□□□□ 0.87
COL16A1-211ENST00000479100 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
COL16A1-211ENST00000479100 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
COL16A1-211ENST00000479100 PARP4Q9UKK3 1724 aaKnown RBP20.5■□□□□ 0.87
COL16A1-211ENST00000479100 DDB1Q16531 1140 aa20.5■□□□□ 0.87
COL16A1-211ENST00000479100 CDCA7Q9BWT1 371 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-211ENST00000479100 OVOS2A0A0G2JMS6 1433 aa20.48■□□□□ 0.87
COL16A1-211ENST00000479100 MARCH10Q8NA82 808 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-211ENST00000479100 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
COL16A1-211ENST00000479100 BCL9O00512 1426 aa20.47■□□□□ 0.87
COL16A1-211ENST00000479100 EYA1Q99502 592 aa20.47■□□□□ 0.87
COL16A1-211ENST00000479100 FAM208AQ9UK61 1670 aaKnown RBP20.47■□□□□ 0.87
COL16A1-211ENST00000479100 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
COL16A1-211ENST00000479100 IL2RBP14784 551 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms