RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 THRAP3Q9Y2W1 955 aaKnown RBP23.52■■□□□ 1.36
CDKN1A-207ENST00000478800 BARGINQ6ZT62 677 aa23.51■■□□□ 1.35
CDKN1A-207ENST00000478800 CCDC125Q86Z20 511 aa23.51■■□□□ 1.35
CDKN1A-207ENST00000478800 AXIN2Q9Y2T1 843 aa23.51■■□□□ 1.35
CDKN1A-207ENST00000478800 CRB1P82279 1406 aa23.5■■□□□ 1.35
CDKN1A-207ENST00000478800 NFAT5O94916 1531 aa23.49■■□□□ 1.35
CDKN1A-207ENST00000478800 OVOS2A0A0J9YW53 1432 aa23.49■■□□□ 1.35
CDKN1A-207ENST00000478800 OVOS2Q6IE36 1432 aa23.49■■□□□ 1.35
CDKN1A-207ENST00000478800 SF3B2Q13435 895 aaKnown RBP23.48■■□□□ 1.35
CDKN1A-207ENST00000478800 WDR17Q8IZU2 1322 aa23.48■■□□□ 1.35
CDKN1A-207ENST00000478800 PDE3BQ13370 1112 aa23.46■■□□□ 1.35
CDKN1A-207ENST00000478800 GGNBP2Q9H3C7 697 aa23.46■■□□□ 1.35
CDKN1A-207ENST00000478800 SRCAPQ6ZRS2 3230 aa23.45■■□□□ 1.34
CDKN1A-207ENST00000478800 FYB1O15117 783 aa23.45■■□□□ 1.34
CDKN1A-207ENST00000478800 USP54Q70EL1 1684 aa23.44■■□□□ 1.34
CDKN1A-207ENST00000478800 NSD3Q9BZ95 1437 aa23.43■■□□□ 1.34
CDKN1A-207ENST00000478800 CARD14Q9BXL6 1004 aa23.43■■□□□ 1.34
CDKN1A-207ENST00000478800 ABCC6O95255 1503 aa23.43■■□□□ 1.34
CDKN1A-207ENST00000478800 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
CDKN1A-207ENST00000478800 AMPHP49418 695 aa23.42■■□□□ 1.34
CDKN1A-207ENST00000478800 CARD10Q9BWT7 1032 aa23.42■■□□□ 1.34
CDKN1A-207ENST00000478800 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
CDKN1A-207ENST00000478800 THSD7AQ9UPZ6 1657 aa23.41■■□□□ 1.34
CDKN1A-207ENST00000478800 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
CDKN1A-207ENST00000478800 COL18A1P39060 1754 aa23.41■■□□□ 1.34
CDKN1A-207ENST00000478800 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
CDKN1A-207ENST00000478800 CDCA7Q9BWT1 371 aaPredicted RBP23.4■■□□□ 1.34
CDKN1A-207ENST00000478800 NLRP2Q9NX02 1062 aa23.4■■□□□ 1.34
CDKN1A-207ENST00000478800 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
CDKN1A-207ENST00000478800 IP6K1Q92551 441 aa23.39■■□□□ 1.33
CDKN1A-207ENST00000478800 MYOM1P52179 1685 aa23.38■■□□□ 1.33
CDKN1A-207ENST00000478800 ERBB3P21860 1342 aa23.38■■□□□ 1.33
CDKN1A-207ENST00000478800 MAP3K19Q56UN5 1328 aa23.38■■□□□ 1.33
CDKN1A-207ENST00000478800 FAM196AQ6ZSG2 479 aa23.38■■□□□ 1.33
CDKN1A-207ENST00000478800 CCDC7Q96M83 1385 aa23.38■■□□□ 1.33
CDKN1A-207ENST00000478800 DDB1Q16531 1140 aa23.37■■□□□ 1.33
CDKN1A-207ENST00000478800 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
CDKN1A-207ENST00000478800 PANK3Q9H999 370 aa23.36■■□□□ 1.33
CDKN1A-207ENST00000478800 FBLN1P23142 703 aa23.35■■□□□ 1.33
CDKN1A-207ENST00000478800 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
CDKN1A-207ENST00000478800 HOXC9P31274 260 aa23.34■■□□□ 1.33
CDKN1A-207ENST00000478800 RRS1Q15050 365 aaKnown RBP23.34■■□□□ 1.33
CDKN1A-207ENST00000478800 LTN1O94822 1766 aa23.34■■□□□ 1.33
CDKN1A-207ENST00000478800 RTL1A6NKG5 1358 aa23.32■■□□□ 1.32
CDKN1A-207ENST00000478800 BAG6P46379 1132 aa23.32■■□□□ 1.32
CDKN1A-207ENST00000478800 EXOC5O00471 708 aa23.31■■□□□ 1.32
CDKN1A-207ENST00000478800 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
CDKN1A-207ENST00000478800 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
CDKN1A-207ENST00000478800 KIF20BQ96Q89 1820 aa23.3■■□□□ 1.32
CDKN1A-207ENST00000478800 KIF7Q2M1P5 1343 aa23.3■■□□□ 1.32
CDKN1A-207ENST00000478800 TRIM37O94972 964 aa23.29■■□□□ 1.32
CDKN1A-207ENST00000478800 SMG6Q86US8 1419 aaKnown RBP23.28■■□□□ 1.32
CDKN1A-207ENST00000478800 IL2RBP14784 551 aa23.28■■□□□ 1.32
CDKN1A-207ENST00000478800 KNSTRNQ9Y448 316 aa23.28■■□□□ 1.32
CDKN1A-207ENST00000478800 PPM1GO15355 546 aaPredicted RBP23.27■■□□□ 1.32
CDKN1A-207ENST00000478800 PARP4Q9UKK3 1724 aaKnown RBP23.27■■□□□ 1.32
CDKN1A-207ENST00000478800 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
CDKN1A-207ENST00000478800 FLT4P35916 1363 aa23.26■■□□□ 1.31
CDKN1A-207ENST00000478800 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
CDKN1A-207ENST00000478800 DISP2A7MBM2 1401 aa23.25■■□□□ 1.31
CDKN1A-207ENST00000478800 APBA3O96018 575 aa23.24■■□□□ 1.31
CDKN1A-207ENST00000478800 TNNT2P45379 298 aaPredicted RBP23.24■■□□□ 1.31
CDKN1A-207ENST00000478800 HSP90AB2PQ58FF8 381 aa23.23■■□□□ 1.31
CDKN1A-207ENST00000478800 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
CDKN1A-207ENST00000478800 NSD2O96028 1365 aa23.23■■□□□ 1.31
CDKN1A-207ENST00000478800 INSRP06213 1382 aa23.23■■□□□ 1.31
CDKN1A-207ENST00000478800 LRRC37A3O60309 1634 aa23.22■■□□□ 1.31
CDKN1A-207ENST00000478800 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
CDKN1A-207ENST00000478800 MARCH10Q8NA82 808 aaPredicted RBP23.22■■□□□ 1.31
CDKN1A-207ENST00000478800 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
CDKN1A-207ENST00000478800 RGPD1P0DJD0 1748 aa23.21■■□□□ 1.31
CDKN1A-207ENST00000478800 TNS2Q63HR2 1409 aa23.2■■□□□ 1.3
CDKN1A-207ENST00000478800 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
CDKN1A-207ENST00000478800 FAM208AQ9UK61 1670 aaKnown RBP23.19■■□□□ 1.3
CDKN1A-207ENST00000478800 POLKQ9UBT6 870 aa23.18■■□□□ 1.3
CDKN1A-207ENST00000478800 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
CDKN1A-207ENST00000478800 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
CDKN1A-207ENST00000478800 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
CDKN1A-207ENST00000478800 WASHC2AQ641Q2 1341 aa23.16■■□□□ 1.3
CDKN1A-207ENST00000478800 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
CDKN1A-207ENST00000478800 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
CDKN1A-207ENST00000478800 EZH2Q15910 746 aaKnown RBP23.14■■□□□ 1.29
CDKN1A-207ENST00000478800 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
CDKN1A-207ENST00000478800 BCL9O00512 1426 aa23.14■■□□□ 1.29
CDKN1A-207ENST00000478800 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
CDKN1A-207ENST00000478800 PARD3Q8TEW0 1356 aa23.13■■□□□ 1.29
CDKN1A-207ENST00000478800 ZCRB1Q8TBF4 217 aaKnown RBP23.12■■□□□ 1.29
CDKN1A-207ENST00000478800 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
CDKN1A-207ENST00000478800 PEAK1Q9H792 1746 aa23.12■■□□□ 1.29
CDKN1A-207ENST00000478800 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
CDKN1A-207ENST00000478800 TNS1Q9HBL0 1735 aaKnown RBP23.11■■□□□ 1.29
CDKN1A-207ENST00000478800 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
CDKN1A-207ENST00000478800 ACSBG1Q96GR2 724 aa23.09■■□□□ 1.29
CDKN1A-207ENST00000478800 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
CDKN1A-207ENST00000478800 PER1O15534 1290 aaPredicted RBP23.07■■□□□ 1.28
CDKN1A-207ENST00000478800 MEGF6O75095 1541 aa23.07■■□□□ 1.28
CDKN1A-207ENST00000478800 PLSCR1O15162 318 aa23.06■■□□□ 1.28
CDKN1A-207ENST00000478800 CNGB1Q14028 1251 aaPredicted RBP23.06■■□□□ 1.28
CDKN1A-207ENST00000478800 EIF4A2Q14240 407 aaKnown RBP23.06■■□□□ 1.28
CDKN1A-207ENST00000478800 NBPF14Q5TI25 921 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms