RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
PGK1-204ENST00000477335 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
PGK1-204ENST00000477335 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
PGK1-204ENST00000477335 INSRP06213 1382 aa12.53□□□□□ -0.4
PGK1-204ENST00000477335 LTN1O94822 1766 aa12.52□□□□□ -0.41
PGK1-204ENST00000477335 COL18A1P39060 1754 aa12.52□□□□□ -0.41
PGK1-204ENST00000477335 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
PGK1-204ENST00000477335 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
PGK1-204ENST00000477335 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
PGK1-204ENST00000477335 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
PGK1-204ENST00000477335 PNISRQ8TF01 805 aaKnown RBP12.51□□□□□ -0.41
PGK1-204ENST00000477335 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
PGK1-204ENST00000477335 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
PGK1-204ENST00000477335 ZBTB7CA1YPR0 619 aa12.5□□□□□ -0.41
PGK1-204ENST00000477335 HOXC9P31274 260 aa12.5□□□□□ -0.41
PGK1-204ENST00000477335 CHRNA2Q15822 529 aa12.5□□□□□ -0.41
PGK1-204ENST00000477335 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
PGK1-204ENST00000477335 CPDO75976 1380 aa12.5□□□□□ -0.41
PGK1-204ENST00000477335 LMO7Q8WWI1 1683 aa12.49□□□□□ -0.41
PGK1-204ENST00000477335 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
PGK1-204ENST00000477335 FLT4P35916 1363 aa12.49□□□□□ -0.41
PGK1-204ENST00000477335 JCADQ9P266 1359 aa12.49□□□□□ -0.41
PGK1-204ENST00000477335 IL13P35225 146 aa12.49□□□□□ -0.41
PGK1-204ENST00000477335 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
PGK1-204ENST00000477335 LRP6O75581 1613 aa12.48□□□□□ -0.41
PGK1-204ENST00000477335 KIF24Q5T7B8 1368 aa12.48□□□□□ -0.41
PGK1-204ENST00000477335 AMPHP49418 695 aa12.48□□□□□ -0.41
PGK1-204ENST00000477335 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
PGK1-204ENST00000477335 IP6K1Q92551 441 aa12.48□□□□□ -0.41
PGK1-204ENST00000477335 FAM83GA6ND36 823 aa12.47□□□□□ -0.41
PGK1-204ENST00000477335 RGPD1P0DJD0 1748 aa12.47□□□□□ -0.41
PGK1-204ENST00000477335 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
PGK1-204ENST00000477335 RGPD5Q99666 1765 aa12.46□□□□□ -0.41
PGK1-204ENST00000477335 FAM9BQ8IZU0 186 aa12.46□□□□□ -0.41
PGK1-204ENST00000477335 CFAP53Q96M91 514 aa12.46□□□□□ -0.41
PGK1-204ENST00000477335 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
PGK1-204ENST00000477335 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
PGK1-204ENST00000477335 DIAPH1O60610 1272 aaKnown RBP12.45□□□□□ -0.42
PGK1-204ENST00000477335 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
PGK1-204ENST00000477335 ADAMTS8Q9UP79 889 aa12.45□□□□□ -0.42
PGK1-204ENST00000477335 ABCC6O95255 1503 aa12.45□□□□□ -0.42
PGK1-204ENST00000477335 ADAMTS2O95450 1211 aa12.44□□□□□ -0.42
PGK1-204ENST00000477335 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
PGK1-204ENST00000477335 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
PGK1-204ENST00000477335 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
PGK1-204ENST00000477335 PRDM11Q9NQV5 511 aa12.44□□□□□ -0.42
PGK1-204ENST00000477335 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
PGK1-204ENST00000477335 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
PGK1-204ENST00000477335 CAPN15O75808 1086 aa12.43□□□□□ -0.42
PGK1-204ENST00000477335 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
PGK1-204ENST00000477335 ANKRD24Q8TF21 1146 aa12.43□□□□□ -0.42
PGK1-204ENST00000477335 EYA1Q99502 592 aa12.43□□□□□ -0.42
PGK1-204ENST00000477335 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
PGK1-204ENST00000477335 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
PGK1-204ENST00000477335 ERBB3P21860 1342 aa12.42□□□□□ -0.42
PGK1-204ENST00000477335 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
PGK1-204ENST00000477335 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
PGK1-204ENST00000477335 U2SURPO15042 1029 aaKnown RBP12.42□□□□□ -0.42
PGK1-204ENST00000477335 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
PGK1-204ENST00000477335 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 HMOX1P09601 288 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 U2AF1L5P0DN76 240 aaPredicted RBP12.41□□□□□ -0.42
PGK1-204ENST00000477335 U2AF1Q01081 240 aaKnown RBP eCLIP12.41□□□□□ -0.42
PGK1-204ENST00000477335 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
PGK1-204ENST00000477335 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
PGK1-204ENST00000477335 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
PGK1-204ENST00000477335 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
PGK1-204ENST00000477335 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
PGK1-204ENST00000477335 SLIT2O94813 1529 aa12.4□□□□□ -0.42
PGK1-204ENST00000477335 BTG4Q9NY30 223 aa12.39□□□□□ -0.43
PGK1-204ENST00000477335 NUDCQ9Y266 331 aa12.39□□□□□ -0.43
PGK1-204ENST00000477335 KDRP35968 1356 aa12.39□□□□□ -0.43
PGK1-204ENST00000477335 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
PGK1-204ENST00000477335 LARP1Q6PKG0 1096 aaKnown RBP12.38□□□□□ -0.43
PGK1-204ENST00000477335 PRKAR2BP31323 418 aa12.37□□□□□ -0.43
PGK1-204ENST00000477335 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
PGK1-204ENST00000477335 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
PGK1-204ENST00000477335 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
PGK1-204ENST00000477335 PHACTR3Q96KR7 559 aa12.36□□□□□ -0.43
PGK1-204ENST00000477335 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
PGK1-204ENST00000477335 STRN4Q9NRL3 753 aa12.36□□□□□ -0.43
PGK1-204ENST00000477335 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
PGK1-204ENST00000477335 FCHSD2O94868 740 aa12.35□□□□□ -0.43
PGK1-204ENST00000477335 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
PGK1-204ENST00000477335 RUNDC1Q96C34 613 aa12.35□□□□□ -0.43
PGK1-204ENST00000477335 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
PGK1-204ENST00000477335 MEGF6O75095 1541 aa12.35□□□□□ -0.43
PGK1-204ENST00000477335 APAF1O14727 1248 aa12.34□□□□□ -0.43
PGK1-204ENST00000477335 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
PGK1-204ENST00000477335 CRB1P82279 1406 aa12.34□□□□□ -0.43
PGK1-204ENST00000477335 HNRNPUQ00839 825 aaKnown RBP eCLIP12.33□□□□□ -0.44
PGK1-204ENST00000477335 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
PGK1-204ENST00000477335 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
PGK1-204ENST00000477335 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
PGK1-204ENST00000477335 EVA1CP58658 441 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms