RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 KLRG1Q96E93 195 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 DNAJC2Q99543 621 aaKnown RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 CDCA7Q9BWT1 371 aaPredicted RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 PCGF6Q9BYE7 350 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 BACH2Q9BYV9 841 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 PRKAG2Q9UGJ0 569 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 EGFL7Q9UHF1 273 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 ZMIZ1Q9ULJ6 1067 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 EIF3JO75822 258 aaKnown RBP3.93□□□□□ -1.78
HMGN4-202ENST00000477243 PHF14O94880 888 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 C7P10643 843 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 SERPINB4P48594 390 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 CCDC144BQ3MJ40 725 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 HSP90AB2PQ58FF8 381 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 RNF187Q5TA31 235 aaPredicted RBP3.93□□□□□ -1.78
HMGN4-202ENST00000477243 LARP1Q6PKG0 1096 aaKnown RBP3.93□□□□□ -1.78
HMGN4-202ENST00000477243 PPARGC1BQ86YN6 1023 aaKnown RBP3.93□□□□□ -1.78
HMGN4-202ENST00000477243 STK32AQ8WU08 396 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 SPACA7Q96KW9 195 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 ASB16Q96NS5 453 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 TMEM106CQ9BVX2 250 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 ZBTB3Q9H5J0 574 aa3.93□□□□□ -1.78
HMGN4-202ENST00000477243 NOP58Q9Y2X3 529 aaKnown RBP3.93□□□□□ -1.78
HMGN4-202ENST00000477243 USP9XQ93008 2570 aaPredicted RBP3.93□□□□□ -1.78
HMGN4-202ENST00000477243 TSPOAP1O95153 1857 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 SETXQ7Z333 2677 aaKnown RBP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 WDR62O43379 1518 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 MOXD2PA6NHM9 499 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 CD46P15529 392 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 ATP2B4P23634 1241 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 MAPK1P28482 360 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 RXRBP28702 533 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 GTF2F1P35269 517 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 FOSBP53539 338 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 HDLBPQ00341 1268 aaKnown RBP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 SWI5Q1ZZU3 235 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 HABP4Q5JVS0 413 aaKnown RBP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 PLEKHM2Q8IWE5 1019 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 CCAR1Q8IX12 1150 aaKnown RBP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 HELBQ8NG08 1087 aaPredicted RBP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 ABHD8Q96I13 439 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 TRIM34Q9BYJ4 488 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 UBA5Q9GZZ9 404 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 TMX1Q9H3N1 280 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 ANO8Q9HCE9 1232 aaPredicted RBP3.92□□□□□ -1.78
HMGN4-202ENST00000477243 DCTN4Q9UJW0 460 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 PCDHB15Q9Y5E8 787 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 ADGRG1Q9Y653 693 aa3.92□□□□□ -1.78
HMGN4-202ENST00000477243 STRCQ7RTU9 1775 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.91□□□□□ -1.78
HMGN4-202ENST00000477243 C2orf72A6NCS6 295 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 CTDSPL2Q05D32 466 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 RBL2Q08999 1139 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 RNF135Q8IUD6 432 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 TEX2Q8IWB9 1127 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 MICALL2Q8IY33 904 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 TGIF2Q9GZN2 237 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 CDHR5Q9HBB8 845 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 METTL5Q9NRN9 209 aaKnown RBP3.91□□□□□ -1.78
HMGN4-202ENST00000477243 PDS5BQ9NTI5 1447 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 NCAPD3P42695 1498 aa3.91□□□□□ -1.78
HMGN4-202ENST00000477243 DIP2BQ9P265 1576 aa3.9□□□□□ -1.78
HMGN4-202ENST00000477243 USP17L15C9J2P7 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L10C9JJH3 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L13C9JLJ4 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L12C9JPN9 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L11C9JVI0 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L21D6R901 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L18D6R9N7 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L22D6RA61 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L17D6RBQ6 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L19D6RCP7 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L20D6RJB6 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 ATP5J2-PTCD1G3V325 749 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 G3V3G9 751 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 KIF3CO14782 793 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 NDUFV2P19404 249 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 HSD3B2P26439 372 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L24Q0WX57 530 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 MRPL58Q14197 206 aaKnown RBP3.9□□□□□ -1.79
HMGN4-202ENST00000477243 NT5DC4Q86YG4 428 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 GLYCTKQ8IVS8 523 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 TMEM87AQ8NBN3 555 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 SLAIN1Q8ND83 568 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 NLRP7Q8WX94 980 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 GMLQ99445 158 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 ZSWIM4Q9H7M6 989 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 CCSER2Q9H7U1 834 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 SLC52A1Q9NWF4 448 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 TBX22Q9Y458 520 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 GAPVD1Q14C86 1478 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 ADAMTSL3P82987 1691 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP24Q9UPU5 2620 aa3.9□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L3A6NCW0 530 aa3.89□□□□□ -1.79
HMGN4-202ENST00000477243 USP17L4A6NCW7 530 aa3.89□□□□□ -1.79
HMGN4-202ENST00000477243 MAFGO15525 162 aa3.89□□□□□ -1.79
HMGN4-202ENST00000477243 ICMTO60725 284 aa3.89□□□□□ -1.79
HMGN4-202ENST00000477243 GPR37L1O60883 481 aa3.89□□□□□ -1.79
HMGN4-202ENST00000477243 ABL1P00519 1130 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms