RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
APTX-220ENST00000476858 VPS72Q15906 364 aa17.32■□□□□ 0.36
APTX-220ENST00000476858 CDCA8Q53HL2 280 aa17.32■□□□□ 0.36
APTX-220ENST00000476858 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
APTX-220ENST00000476858 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
APTX-220ENST00000476858 FYB1O15117 783 aa17.31■□□□□ 0.36
APTX-220ENST00000476858 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
APTX-220ENST00000476858 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
APTX-220ENST00000476858 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
APTX-220ENST00000476858 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
APTX-220ENST00000476858 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
APTX-220ENST00000476858 COL5A2P05997 1499 aaPredicted RBP17.28■□□□□ 0.36
APTX-220ENST00000476858 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
APTX-220ENST00000476858 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
APTX-220ENST00000476858 SPATA31A5Q5VU36 1347 aa17.27■□□□□ 0.36
APTX-220ENST00000476858 SPATA31A7Q8IWB4 1347 aa17.27■□□□□ 0.36
APTX-220ENST00000476858 PANK3Q9H999 370 aa17.27■□□□□ 0.36
APTX-220ENST00000476858 LTN1O94822 1766 aa17.27■□□□□ 0.35
APTX-220ENST00000476858 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
APTX-220ENST00000476858 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
APTX-220ENST00000476858 FAM98CQ17RN3 349 aaKnown RBP17.26■□□□□ 0.35
APTX-220ENST00000476858 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
APTX-220ENST00000476858 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
APTX-220ENST00000476858 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
APTX-220ENST00000476858 SEPT12Q8IYM1 358 aa17.24■□□□□ 0.35
APTX-220ENST00000476858 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
APTX-220ENST00000476858 COG3Q96JB2 828 aa17.24■□□□□ 0.35
APTX-220ENST00000476858 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
APTX-220ENST00000476858 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
APTX-220ENST00000476858 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
APTX-220ENST00000476858 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
APTX-220ENST00000476858 PEAK1Q9H792 1746 aa17.22■□□□□ 0.35
APTX-220ENST00000476858 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
APTX-220ENST00000476858 CAPN15O75808 1086 aa17.22■□□□□ 0.35
APTX-220ENST00000476858 KCNA4P22459 653 aa17.22■□□□□ 0.35
APTX-220ENST00000476858 EVA1CP58658 441 aa17.22■□□□□ 0.35
APTX-220ENST00000476858 FAM182BQ5T319 152 aa17.21■□□□□ 0.35
APTX-220ENST00000476858 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
APTX-220ENST00000476858 EP400Q96L91 3159 aa17.18■□□□□ 0.34
APTX-220ENST00000476858 CRB1P82279 1406 aa17.18■□□□□ 0.34
APTX-220ENST00000476858 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
APTX-220ENST00000476858 A0A0G2JS52 829 aa17.17■□□□□ 0.34
APTX-220ENST00000476858 MYT1Q01538 1121 aa17.17■□□□□ 0.34
APTX-220ENST00000476858 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
APTX-220ENST00000476858 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
APTX-220ENST00000476858 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
APTX-220ENST00000476858 HOXC9P31274 260 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 DSG3P32926 999 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
APTX-220ENST00000476858 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 IP6K1Q92551 441 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 CGNL1Q0VF96 1302 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 ABCC6O95255 1503 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 ANKRD26Q9UPS8 1709 aa17.16■□□□□ 0.34
APTX-220ENST00000476858 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
APTX-220ENST00000476858 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
APTX-220ENST00000476858 ERBB3P21860 1342 aa17.15■□□□□ 0.34
APTX-220ENST00000476858 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
APTX-220ENST00000476858 AMER1Q5JTC6 1135 aaPredicted RBP17.14■□□□□ 0.33
APTX-220ENST00000476858 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.33
APTX-220ENST00000476858 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
APTX-220ENST00000476858 BARGINQ6ZT62 677 aa17.13■□□□□ 0.33
APTX-220ENST00000476858 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
APTX-220ENST00000476858 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
APTX-220ENST00000476858 AMPHP49418 695 aa17.12■□□□□ 0.33
APTX-220ENST00000476858 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
APTX-220ENST00000476858 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
APTX-220ENST00000476858 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
APTX-220ENST00000476858 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
APTX-220ENST00000476858 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
APTX-220ENST00000476858 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
APTX-220ENST00000476858 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
APTX-220ENST00000476858 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
APTX-220ENST00000476858 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
APTX-220ENST00000476858 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
APTX-220ENST00000476858 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
APTX-220ENST00000476858 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
APTX-220ENST00000476858 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
APTX-220ENST00000476858 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
APTX-220ENST00000476858 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.32
APTX-220ENST00000476858 NBPF4Q96M43 638 aa17.08■□□□□ 0.32
APTX-220ENST00000476858 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
APTX-220ENST00000476858 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
APTX-220ENST00000476858 INSRP06213 1382 aa17.06■□□□□ 0.32
APTX-220ENST00000476858 FLT4P35916 1363 aa17.06■□□□□ 0.32
APTX-220ENST00000476858 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
APTX-220ENST00000476858 NSD2O96028 1365 aa17.05■□□□□ 0.32
APTX-220ENST00000476858 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
APTX-220ENST00000476858 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
APTX-220ENST00000476858 MEGF6O75095 1541 aa17.04■□□□□ 0.32
APTX-220ENST00000476858 SMG6Q86US8 1419 aaKnown RBP17.03■□□□□ 0.32
APTX-220ENST00000476858 DDB1Q16531 1140 aa17.02■□□□□ 0.32
APTX-220ENST00000476858 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
APTX-220ENST00000476858 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
APTX-220ENST00000476858 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
APTX-220ENST00000476858 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
APTX-220ENST00000476858 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
APTX-220ENST00000476858 IL2RBP14784 551 aa17■□□□□ 0.31
APTX-220ENST00000476858 TNS2Q63HR2 1409 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms