RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
LSAMP-203ENST00000474851 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
LSAMP-203ENST00000474851 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
LSAMP-203ENST00000474851 THRAP3Q9Y2W1 955 aaKnown RBP10.05□□□□□ -0.8
LSAMP-203ENST00000474851 EDC4Q6P2E9 1401 aaKnown RBP10.05□□□□□ -0.8
LSAMP-203ENST00000474851 SLIT3O75094 1523 aa10.04□□□□□ -0.8
LSAMP-203ENST00000474851 A0A0G2JS52 829 aa10.04□□□□□ -0.8
LSAMP-203ENST00000474851 FYB1O15117 783 aa10.04□□□□□ -0.8
LSAMP-203ENST00000474851 FBLN1P23142 703 aa10.04□□□□□ -0.8
LSAMP-203ENST00000474851 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
LSAMP-203ENST00000474851 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-203ENST00000474851 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
LSAMP-203ENST00000474851 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
LSAMP-203ENST00000474851 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
LSAMP-203ENST00000474851 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
LSAMP-203ENST00000474851 COL14A1Q05707 1796 aaKnown RBP10.03□□□□□ -0.8
LSAMP-203ENST00000474851 WDR17Q8IZU2 1322 aa10.03□□□□□ -0.8
LSAMP-203ENST00000474851 ITSN1Q15811 1721 aa10.02□□□□□ -0.8
LSAMP-203ENST00000474851 NRKQ7Z2Y5 1582 aa10.02□□□□□ -0.81
LSAMP-203ENST00000474851 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-203ENST00000474851 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
LSAMP-203ENST00000474851 TOM1L2Q6ZVM7 507 aa10.02□□□□□ -0.81
LSAMP-203ENST00000474851 CARD10Q9BWT7 1032 aa10.02□□□□□ -0.81
LSAMP-203ENST00000474851 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
LSAMP-203ENST00000474851 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.02□□□□□ -0.81
LSAMP-203ENST00000474851 CRYBG1Q9Y4K1 1723 aa10.02□□□□□ -0.81
LSAMP-203ENST00000474851 OVOS2A0A0J9YW53 1432 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 CRB1P82279 1406 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 OVOS2Q6IE36 1432 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 C11orf95C9JLR9 678 aaPredicted RBP10.01□□□□□ -0.81
LSAMP-203ENST00000474851 PDE3BQ13370 1112 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 FAM196AQ6ZSG2 479 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 IP6K1Q92551 441 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 COG3Q96JB2 828 aa10.01□□□□□ -0.81
LSAMP-203ENST00000474851 NWD2Q9ULI1 1742 aa10□□□□□ -0.81
LSAMP-203ENST00000474851 MARF1Q9Y4F3 1742 aaKnown RBP10□□□□□ -0.81
LSAMP-203ENST00000474851 CSB-PGBD3P0DP91 1061 aa10□□□□□ -0.81
LSAMP-203ENST00000474851 GGNBP2Q9H3C7 697 aa10□□□□□ -0.81
LSAMP-203ENST00000474851 NFAT5O94916 1531 aa10□□□□□ -0.81
LSAMP-203ENST00000474851 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
LSAMP-203ENST00000474851 NRAPQ86VF7 1730 aa9.99□□□□□ -0.81
LSAMP-203ENST00000474851 ERBB3P21860 1342 aa9.99□□□□□ -0.81
LSAMP-203ENST00000474851 MAP3K19Q56UN5 1328 aa9.99□□□□□ -0.81
LSAMP-203ENST00000474851 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
LSAMP-203ENST00000474851 LMO7Q8WWI1 1683 aa9.99□□□□□ -0.81
LSAMP-203ENST00000474851 PHRF1Q9P1Y6 1649 aaKnown RBP9.98□□□□□ -0.81
LSAMP-203ENST00000474851 TRIM37O94972 964 aa9.98□□□□□ -0.81
LSAMP-203ENST00000474851 MYCNP04198 464 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-203ENST00000474851 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-203ENST00000474851 SF3B2Q13435 895 aaKnown RBP9.98□□□□□ -0.81
LSAMP-203ENST00000474851 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-203ENST00000474851 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
LSAMP-203ENST00000474851 CDCA7Q9BWT1 371 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-203ENST00000474851 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
LSAMP-203ENST00000474851 HOXC9P31274 260 aa9.97□□□□□ -0.81
LSAMP-203ENST00000474851 RRS1Q15050 365 aaKnown RBP9.97□□□□□ -0.81
LSAMP-203ENST00000474851 DDB1Q16531 1140 aa9.97□□□□□ -0.81
LSAMP-203ENST00000474851 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
LSAMP-203ENST00000474851 NLRP2Q9NX02 1062 aa9.97□□□□□ -0.81
LSAMP-203ENST00000474851 BAG6P46379 1132 aa9.96□□□□□ -0.82
LSAMP-203ENST00000474851 DISP2A7MBM2 1401 aa9.96□□□□□ -0.82
LSAMP-203ENST00000474851 THSD7AQ9UPZ6 1657 aa9.96□□□□□ -0.82
LSAMP-203ENST00000474851 EXOC5O00471 708 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 ABCB7O75027 752 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 AMPHP49418 695 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 EZH2Q15910 746 aaKnown RBP9.95□□□□□ -0.82
LSAMP-203ENST00000474851 PTF1AQ7RTS3 328 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 LTV1Q96GA3 475 aaPredicted RBP9.95□□□□□ -0.82
LSAMP-203ENST00000474851 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 PANK3Q9H999 370 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
LSAMP-203ENST00000474851 APBA3O96018 575 aa9.94□□□□□ -0.82
LSAMP-203ENST00000474851 HSP90AB2PQ58FF8 381 aa9.94□□□□□ -0.82
LSAMP-203ENST00000474851 COL18A1P39060 1754 aa9.93□□□□□ -0.82
LSAMP-203ENST00000474851 BCL9O00512 1426 aa9.93□□□□□ -0.82
LSAMP-203ENST00000474851 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
LSAMP-203ENST00000474851 IL2RBP14784 551 aa9.93□□□□□ -0.82
LSAMP-203ENST00000474851 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
LSAMP-203ENST00000474851 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
LSAMP-203ENST00000474851 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-203ENST00000474851 ABCC6O95255 1503 aa9.92□□□□□ -0.82
LSAMP-203ENST00000474851 CGNL1Q0VF96 1302 aa9.92□□□□□ -0.82
LSAMP-203ENST00000474851 PROM2Q8N271 834 aa9.92□□□□□ -0.82
LSAMP-203ENST00000474851 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
LSAMP-203ENST00000474851 EMILIN1Q9Y6C2 1016 aa9.92□□□□□ -0.82
LSAMP-203ENST00000474851 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
LSAMP-203ENST00000474851 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
LSAMP-203ENST00000474851 PLSCR1O15162 318 aa9.91□□□□□ -0.82
LSAMP-203ENST00000474851 KCNQ2O43526 872 aa9.91□□□□□ -0.82
LSAMP-203ENST00000474851 INSRP06213 1382 aa9.9□□□□□ -0.82
LSAMP-203ENST00000474851 KIF7Q2M1P5 1343 aa9.9□□□□□ -0.82
LSAMP-203ENST00000474851 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.83
LSAMP-203ENST00000474851 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
LSAMP-203ENST00000474851 KIF24Q5T7B8 1368 aa9.89□□□□□ -0.83
LSAMP-203ENST00000474851 WASHC2AQ641Q2 1341 aa9.89□□□□□ -0.83
LSAMP-203ENST00000474851 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
LSAMP-203ENST00000474851 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
LSAMP-203ENST00000474851 USHBP1Q8N6Y0 703 aa9.89□□□□□ -0.83
LSAMP-203ENST00000474851 FLT4P35916 1363 aa9.88□□□□□ -0.83
LSAMP-203ENST00000474851 USP54Q70EL1 1684 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms