RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 FAM43AQ8N2R8 423 aa27.17■■□□□ 1.94
SH3D21-202ENST00000474766 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
SH3D21-202ENST00000474766 TRPM3Q9HCF6 1732 aaPredicted RBP27.17■■□□□ 1.94
SH3D21-202ENST00000474766 CABP1Q9NZU7 370 aa27.17■■□□□ 1.94
SH3D21-202ENST00000474766 KRT28Q7Z3Y7 464 aa27.16■■□□□ 1.94
SH3D21-202ENST00000474766 LRRC59Q96AG4 307 aaKnown RBP27.16■■□□□ 1.94
SH3D21-202ENST00000474766 CFAP53Q96M91 514 aa27.16■■□□□ 1.94
SH3D21-202ENST00000474766 PLEKHG3A1L390 1219 aa27.15■■□□□ 1.94
SH3D21-202ENST00000474766 NGDNQ8NEJ9 315 aaKnown RBP27.14■■□□□ 1.94
SH3D21-202ENST00000474766 RSPH6AQ9H0K4 717 aa27.14■■□□□ 1.94
SH3D21-202ENST00000474766 PNPLA6Q8IY17 1366 aa27.14■■□□□ 1.94
SH3D21-202ENST00000474766 NCBP3Q53F19 620 aaKnown RBP27.14■■□□□ 1.93
SH3D21-202ENST00000474766 ACEP12821 1306 aa27.14■■□□□ 1.93
SH3D21-202ENST00000474766 A0A1W2PP64 1363 aa27.13■■□□□ 1.93
SH3D21-202ENST00000474766 PSME1Q06323 249 aa27.13■■□□□ 1.93
SH3D21-202ENST00000474766 SKAP1Q86WV1 359 aa27.13■■□□□ 1.93
SH3D21-202ENST00000474766 BCAR3O75815 825 aa27.12■■□□□ 1.93
SH3D21-202ENST00000474766 SLC4A3P48751 1232 aa27.12■■□□□ 1.93
SH3D21-202ENST00000474766 TCP11L2Q8N4U5 519 aa27.12■■□□□ 1.93
SH3D21-202ENST00000474766 MED1Q15648 1581 aaPredicted RBP27.11■■□□□ 1.93
SH3D21-202ENST00000474766 CCDC27Q2M243 656 aa27.11■■□□□ 1.93
SH3D21-202ENST00000474766 CD163L1Q9NR16 1453 aa27.1■■□□□ 1.93
SH3D21-202ENST00000474766 COL22A1Q8NFW1 1626 aaPredicted RBP27.1■■□□□ 1.93
SH3D21-202ENST00000474766 SPATA31A3Q5VYP0 1347 aa27.09■■□□□ 1.93
SH3D21-202ENST00000474766 WDR63Q8IWG1 891 aa27.09■■□□□ 1.93
SH3D21-202ENST00000474766 TNS3Q68CZ2 1445 aa27.09■■□□□ 1.93
SH3D21-202ENST00000474766 ALS2Q96Q42 1657 aa27.09■■□□□ 1.93
SH3D21-202ENST00000474766 AKAP12Q02952 1782 aa27.09■■□□□ 1.93
SH3D21-202ENST00000474766 SBNO1A3KN83 1393 aa27.08■■□□□ 1.93
SH3D21-202ENST00000474766 LRP6O75581 1613 aa27.08■■□□□ 1.93
SH3D21-202ENST00000474766 FRAT2O75474 233 aaPredicted RBP27.07■■□□□ 1.92
SH3D21-202ENST00000474766 PDE3AQ14432 1141 aa27.07■■□□□ 1.92
SH3D21-202ENST00000474766 CPSF1Q10570 1443 aaKnown RBP27.06■■□□□ 1.92
SH3D21-202ENST00000474766 SPATA31A6Q5VVP1 1343 aa27.05■■□□□ 1.92
SH3D21-202ENST00000474766 TERF2IPQ9NYB0 399 aa27.04■■□□□ 1.92
SH3D21-202ENST00000474766 RRP7AQ9Y3A4 280 aaKnown RBP27.04■■□□□ 1.92
SH3D21-202ENST00000474766 ANKRD26Q9UPS8 1709 aa27.03■■□□□ 1.92
SH3D21-202ENST00000474766 VIRMAQ69YN4 1812 aaKnown RBP27.03■■□□□ 1.92
SH3D21-202ENST00000474766 USP6P35125 1406 aa27.02■■□□□ 1.92
SH3D21-202ENST00000474766 NEUROD2Q15784 382 aa27.02■■□□□ 1.92
SH3D21-202ENST00000474766 MON2Q7Z3U7 1717 aa27.02■■□□□ 1.92
SH3D21-202ENST00000474766 COL3A1P02461 1466 aaPredicted RBP27.01■■□□□ 1.91
SH3D21-202ENST00000474766 NUTM2BA6NNL0 878 aaPredicted RBP27■■□□□ 1.91
SH3D21-202ENST00000474766 NUTM2EB1AL46 878 aaPredicted RBP27■■□□□ 1.91
SH3D21-202ENST00000474766 NUTM2AQ8IVF1 878 aaPredicted RBP27■■□□□ 1.91
SH3D21-202ENST00000474766 NRKQ7Z2Y5 1582 aa27■■□□□ 1.91
SH3D21-202ENST00000474766 ABCA3Q99758 1704 aa27■■□□□ 1.91
SH3D21-202ENST00000474766 FYB1O15117 783 aa27■■□□□ 1.91
SH3D21-202ENST00000474766 LMOD2Q6P5Q4 547 aa27■■□□□ 1.91
SH3D21-202ENST00000474766 U2AF1L5P0DN76 240 aaPredicted RBP26.99■■□□□ 1.91
SH3D21-202ENST00000474766 U2AF1Q01081 240 aaKnown RBP eCLIP26.99■■□□□ 1.91
SH3D21-202ENST00000474766 GGNBP2Q9H3C7 697 aa26.99■■□□□ 1.91
SH3D21-202ENST00000474766 ARHGEF10O15013 1369 aa26.99■■□□□ 1.91
SH3D21-202ENST00000474766 RARSP54136 660 aaKnown RBP26.98■■□□□ 1.91
SH3D21-202ENST00000474766 ZNF692Q9BU19 519 aaPredicted RBP26.98■■□□□ 1.91
SH3D21-202ENST00000474766 SSH2Q76I76 1423 aa26.98■■□□□ 1.91
SH3D21-202ENST00000474766 HDGFL2Q7Z4V5 671 aaPredicted RBP26.97■■□□□ 1.91
SH3D21-202ENST00000474766 CRYBG1Q9Y4K1 1723 aa26.97■■□□□ 1.91
SH3D21-202ENST00000474766 PLEKHG5O94827 1062 aa26.94■■□□□ 1.9
SH3D21-202ENST00000474766 CABLES1Q8TDN4 633 aa26.94■■□□□ 1.9
SH3D21-202ENST00000474766 PIK3C2AO00443 1686 aa26.94■■□□□ 1.9
SH3D21-202ENST00000474766 PLEKHF1Q96S99 279 aa26.94■■□□□ 1.9
SH3D21-202ENST00000474766 MYH16Q9H6N6 1097 aa26.93■■□□□ 1.9
SH3D21-202ENST00000474766 MARF1Q9Y4F3 1742 aaKnown RBP26.93■■□□□ 1.9
SH3D21-202ENST00000474766 L1TD1Q5T7N2 865 aaKnown RBP26.92■■□□□ 1.9
SH3D21-202ENST00000474766 BECN1Q14457 450 aa26.92■■□□□ 1.9
SH3D21-202ENST00000474766 NUTM2GQ5VZR2 741 aa26.92■■□□□ 1.9
SH3D21-202ENST00000474766 PANK1Q8TE04 598 aa26.9■■□□□ 1.9
SH3D21-202ENST00000474766 EDC4Q6P2E9 1401 aaKnown RBP26.9■■□□□ 1.9
SH3D21-202ENST00000474766 PHRF1Q9P1Y6 1649 aaKnown RBP26.9■■□□□ 1.9
SH3D21-202ENST00000474766 ADAMTS2O95450 1211 aa26.9■■□□□ 1.9
SH3D21-202ENST00000474766 CANXP27824 592 aaKnown RBP26.9■■□□□ 1.9
SH3D21-202ENST00000474766 RGS3P49796 1198 aa26.9■■□□□ 1.9
SH3D21-202ENST00000474766 AAMPQ13685 434 aa26.9■■□□□ 1.9
SH3D21-202ENST00000474766 CLUAP1Q96AJ1 413 aa26.9■■□□□ 1.9
SH3D21-202ENST00000474766 USP19O94966 1318 aa26.89■■□□□ 1.9
SH3D21-202ENST00000474766 TTC21BQ7Z4L5 1316 aa26.89■■□□□ 1.9
SH3D21-202ENST00000474766 MAPK8IP3Q9UPT6 1336 aa26.89■■□□□ 1.9
SH3D21-202ENST00000474766 ABTB2Q8N961 1025 aa26.89■■□□□ 1.9
SH3D21-202ENST00000474766 KIF20BQ96Q89 1820 aa26.89■■□□□ 1.9
SH3D21-202ENST00000474766 MEX3CQ5U5Q3 659 aaKnown RBP26.89■■□□□ 1.89
SH3D21-202ENST00000474766 COG6Q9Y2V7 657 aa26.88■■□□□ 1.89
SH3D21-202ENST00000474766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.87■■□□□ 1.89
SH3D21-202ENST00000474766 IGHDP01880 384 aa26.87■■□□□ 1.89
SH3D21-202ENST00000474766 CT47B1P0C2W7 299 aaPredicted RBP26.86■■□□□ 1.89
SH3D21-202ENST00000474766 TMPOP42166 694 aaKnown RBP26.85■■□□□ 1.89
SH3D21-202ENST00000474766 U2SURPO15042 1029 aaKnown RBP26.85■■□□□ 1.89
SH3D21-202ENST00000474766 TTC21AQ8NDW8 1320 aa26.84■■□□□ 1.89
SH3D21-202ENST00000474766 C8orf37Q96NL8 207 aa26.83■■□□□ 1.89
SH3D21-202ENST00000474766 RGS17Q9UGC6 210 aaPredicted RBP26.83■■□□□ 1.89
SH3D21-202ENST00000474766 TRIM35Q9UPQ4 493 aa26.83■■□□□ 1.89
SH3D21-202ENST00000474766 DIAPH1O60610 1272 aaKnown RBP26.82■■□□□ 1.88
SH3D21-202ENST00000474766 HAP1P54257 671 aaPredicted RBP26.82■■□□□ 1.88
SH3D21-202ENST00000474766 NME9Q86XW9 330 aa26.82■■□□□ 1.88
SH3D21-202ENST00000474766 IL16Q14005 1332 aa26.81■■□□□ 1.88
SH3D21-202ENST00000474766 RLBP1P12271 317 aa26.81■■□□□ 1.88
SH3D21-202ENST00000474766 NLRP6P59044 892 aa26.81■■□□□ 1.88
SH3D21-202ENST00000474766 ZRANB1Q9UGI0 708 aa26.81■■□□□ 1.88
SH3D21-202ENST00000474766 USP54Q70EL1 1684 aa26.81■■□□□ 1.88
SH3D21-202ENST00000474766 PNNQ9H307 717 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms