RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 IFT57Q9NWB7 429 aa28.02■■■□□ 2.08
CCM2-206ENST00000474617 GNAI1P63096 354 aa28.02■■■□□ 2.08
CCM2-206ENST00000474617 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
CCM2-206ENST00000474617 KDM2BQ8NHM5 1336 aa28.01■■■□□ 2.07
CCM2-206ENST00000474617 ALDH1L2Q3SY69 923 aa28.01■■■□□ 2.07
CCM2-206ENST00000474617 HMOX1P09601 288 aa28■■■□□ 2.07
CCM2-206ENST00000474617 PEAK1Q9H792 1746 aa28■■■□□ 2.07
CCM2-206ENST00000474617 RTL1A6NKG5 1358 aa27.99■■■□□ 2.07
CCM2-206ENST00000474617 NCOA3Q9Y6Q9 1424 aa27.98■■■□□ 2.07
CCM2-206ENST00000474617 BRPF1P55201 1214 aaPredicted RBP27.97■■■□□ 2.07
CCM2-206ENST00000474617 ZKSCAN2Q63HK3 967 aa27.97■■■□□ 2.07
CCM2-206ENST00000474617 PHACTR3Q96KR7 559 aa27.97■■■□□ 2.07
CCM2-206ENST00000474617 MAP3K19Q56UN5 1328 aa27.97■■■□□ 2.07
CCM2-206ENST00000474617 KIF16BQ96L93 1317 aa27.97■■■□□ 2.07
CCM2-206ENST00000474617 HAP1P54257 671 aaPredicted RBP27.97■■■□□ 2.07
CCM2-206ENST00000474617 EXOSC9Q06265 439 aaKnown RBP27.97■■■□□ 2.07
CCM2-206ENST00000474617 IPO8O15397 1037 aaKnown RBP27.95■■■□□ 2.06
CCM2-206ENST00000474617 NLRP6P59044 892 aa27.95■■■□□ 2.06
CCM2-206ENST00000474617 TSR2Q969E8 191 aaKnown RBP27.94■■■□□ 2.06
CCM2-206ENST00000474617 KDRP35968 1356 aa27.94■■■□□ 2.06
CCM2-206ENST00000474617 ZNF853P0CG23 659 aa27.93■■■□□ 2.06
CCM2-206ENST00000474617 CLUAP1Q96AJ1 413 aa27.93■■■□□ 2.06
CCM2-206ENST00000474617 AMPHP49418 695 aa27.92■■■□□ 2.06
CCM2-206ENST00000474617 FRAT1Q92837 279 aaPredicted RBP27.92■■■□□ 2.06
CCM2-206ENST00000474617 CFAP44Q96MT7 982 aa27.92■■■□□ 2.06
CCM2-206ENST00000474617 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
CCM2-206ENST00000474617 SMC4Q9NTJ3 1288 aa27.92■■■□□ 2.06
CCM2-206ENST00000474617 MARF1Q9Y4F3 1742 aaKnown RBP27.91■■■□□ 2.06
CCM2-206ENST00000474617 ABTB2Q8N961 1025 aa27.91■■■□□ 2.06
CCM2-206ENST00000474617 KIF1AQ12756 1690 aa27.91■■■□□ 2.06
CCM2-206ENST00000474617 DLG5Q8TDM6 1919 aa27.9■■■□□ 2.06
CCM2-206ENST00000474617 HSP90AB2PQ58FF8 381 aa27.9■■■□□ 2.06
CCM2-206ENST00000474617 IGSF1Q8N6C5 1336 aa27.89■■■□□ 2.06
CCM2-206ENST00000474617 KCNH5Q8NCM2 988 aa27.89■■■□□ 2.06
CCM2-206ENST00000474617 DCCP43146 1447 aa27.89■■■□□ 2.05
CCM2-206ENST00000474617 FTSJ3Q8IY81 847 aaKnown RBP27.87■■■□□ 2.05
CCM2-206ENST00000474617 DZIP1LQ8IYY4 767 aaKnown RBP27.87■■■□□ 2.05
CCM2-206ENST00000474617 PHRF1Q9P1Y6 1649 aaKnown RBP27.87■■■□□ 2.05
CCM2-206ENST00000474617 C14orf37Q86TY3 774 aa27.87■■■□□ 2.05
CCM2-206ENST00000474617 CHMP4BQ9H444 224 aaKnown RBP27.87■■■□□ 2.05
CCM2-206ENST00000474617 MVPQ14764 893 aaKnown RBP27.86■■■□□ 2.05
CCM2-206ENST00000474617 SSH1Q8WYL5 1049 aa27.86■■■□□ 2.05
CCM2-206ENST00000474617 HTATSF1O43719 755 aaKnown RBP27.85■■■□□ 2.05
CCM2-206ENST00000474617 PSME1Q06323 249 aa27.85■■■□□ 2.05
CCM2-206ENST00000474617 ATF7IPQ6VMQ6 1270 aa27.85■■■□□ 2.05
CCM2-206ENST00000474617 PANK1Q8TE04 598 aa27.85■■■□□ 2.05
CCM2-206ENST00000474617 ARHGAP45Q92619 1136 aa27.85■■■□□ 2.05
CCM2-206ENST00000474617 COG6Q9Y2V7 657 aa27.85■■■□□ 2.05
CCM2-206ENST00000474617 MST1RQ04912 1400 aa27.84■■■□□ 2.05
CCM2-206ENST00000474617 GAS2L2Q8NHY3 880 aa27.84■■■□□ 2.05
CCM2-206ENST00000474617 C19orf44Q9H6X5 657 aa27.84■■■□□ 2.05
CCM2-206ENST00000474617 ESCO1Q5FWF5 840 aa27.83■■■□□ 2.05
CCM2-206ENST00000474617 HOXC9P31274 260 aa27.82■■■□□ 2.04
CCM2-206ENST00000474617 PROSER2Q86WR7 435 aaPredicted RBP27.82■■■□□ 2.04
CCM2-206ENST00000474617 DDX19BQ9UMR2 479 aa27.82■■■□□ 2.04
CCM2-206ENST00000474617 PAK3O75914 559 aaPredicted RBP27.82■■■□□ 2.04
CCM2-206ENST00000474617 NFAT5O94916 1531 aa27.81■■■□□ 2.04
CCM2-206ENST00000474617 AEBP1Q8IUX7 1158 aa27.8■■■□□ 2.04
CCM2-206ENST00000474617 KIAA0232Q92628 1395 aa27.79■■■□□ 2.04
CCM2-206ENST00000474617 BCL2L13Q9BXK5 485 aa27.79■■■□□ 2.04
CCM2-206ENST00000474617 MBIPQ9NS73 344 aa27.79■■■□□ 2.04
CCM2-206ENST00000474617 VAMP4O75379 141 aa27.78■■■□□ 2.04
CCM2-206ENST00000474617 LAS1LQ9Y4W2 734 aaKnown RBP27.77■■■□□ 2.04
CCM2-206ENST00000474617 SLIT3O75094 1523 aa27.77■■■□□ 2.04
CCM2-206ENST00000474617 TRIM27P14373 513 aa27.77■■■□□ 2.04
CCM2-206ENST00000474617 IP6K1Q92551 441 aa27.77■■■□□ 2.04
CCM2-206ENST00000474617 EYA1Q99502 592 aa27.77■■■□□ 2.04
CCM2-206ENST00000474617 RWDD1Q9H446 243 aaPredicted RBP27.77■■■□□ 2.04
CCM2-206ENST00000474617 C1orf167Q5SNV9 1468 aa27.76■■■□□ 2.03
CCM2-206ENST00000474617 SOX12O15370 315 aa27.76■■■□□ 2.03
CCM2-206ENST00000474617 RLBP1P12271 317 aa27.76■■■□□ 2.03
CCM2-206ENST00000474617 CHL1O00533 1208 aa27.75■■■□□ 2.03
CCM2-206ENST00000474617 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
CCM2-206ENST00000474617 NOB1Q9ULX3 412 aaKnown RBP27.75■■■□□ 2.03
CCM2-206ENST00000474617 LTN1O94822 1766 aa27.74■■■□□ 2.03
CCM2-206ENST00000474617 TWISTNBQ3B726 338 aaPredicted RBP27.73■■■□□ 2.03
CCM2-206ENST00000474617 BABAM1Q9NWV8 329 aa27.73■■■□□ 2.03
CCM2-206ENST00000474617 SOS1Q07889 1333 aaPredicted RBP27.72■■■□□ 2.03
CCM2-206ENST00000474617 PDE4AP27815 886 aa27.72■■■□□ 2.03
CCM2-206ENST00000474617 THUMPD2Q9BTF0 503 aaKnown RBP27.72■■■□□ 2.03
CCM2-206ENST00000474617 BACH2Q9BYV9 841 aa27.72■■■□□ 2.03
CCM2-206ENST00000474617 TRPM3Q9HCF6 1732 aaPredicted RBP27.72■■■□□ 2.03
CCM2-206ENST00000474617 MRPL50Q8N5N7 158 aaKnown RBP27.71■■■□□ 2.03
CCM2-206ENST00000474617 CRB1P82279 1406 aa27.7■■■□□ 2.02
CCM2-206ENST00000474617 USP19O94966 1318 aa27.7■■■□□ 2.02
CCM2-206ENST00000474617 ATF3P18847 181 aa27.7■■■□□ 2.02
CCM2-206ENST00000474617 API5Q9BZZ5 524 aaKnown RBP27.69■■■□□ 2.02
CCM2-206ENST00000474617 ANP32AP39687 249 aaKnown RBP27.68■■■□□ 2.02
CCM2-206ENST00000474617 CADPS2Q86UW7 1296 aa27.67■■■□□ 2.02
CCM2-206ENST00000474617 LRRC37A3O60309 1634 aa27.67■■■□□ 2.02
CCM2-206ENST00000474617 FAM83GA6ND36 823 aa27.67■■■□□ 2.02
CCM2-206ENST00000474617 HDAC1Q13547 482 aaPredicted RBP27.67■■■□□ 2.02
CCM2-206ENST00000474617 MTHFSDQ2M296 383 aaKnown RBP27.67■■■□□ 2.02
CCM2-206ENST00000474617 TMEM94Q12767 1356 aa27.66■■■□□ 2.02
CCM2-206ENST00000474617 IGHDP01880 384 aa27.66■■■□□ 2.02
CCM2-206ENST00000474617 NUTM2GQ5VZR2 741 aa27.66■■■□□ 2.02
CCM2-206ENST00000474617 ITPRIPQ8IWB1 547 aa27.66■■■□□ 2.02
CCM2-206ENST00000474617 RBM33Q96EV2 1170 aaKnown RBP27.65■■■□□ 2.02
CCM2-206ENST00000474617 ORAI2Q96SN7 254 aa27.65■■■□□ 2.02
CCM2-206ENST00000474617 GNAT3A8MTJ3 354 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms