RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
CDHR3-210ENST00000474330 EMILIN1Q9Y6C2 1016 aa27.16■■□□□ 1.94
CDHR3-210ENST00000474330 BLMP54132 1417 aaPredicted RBP27.16■■□□□ 1.94
CDHR3-210ENST00000474330 CDK12Q9NYV4 1490 aaPredicted RBP27.16■■□□□ 1.94
CDHR3-210ENST00000474330 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
CDHR3-210ENST00000474330 SLIT2O94813 1529 aa27.14■■□□□ 1.93
CDHR3-210ENST00000474330 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
CDHR3-210ENST00000474330 SLIT3O75094 1523 aa27.13■■□□□ 1.93
CDHR3-210ENST00000474330 PHRF1Q9P1Y6 1649 aaKnown RBP27.12■■□□□ 1.93
CDHR3-210ENST00000474330 PPM1GO15355 546 aaPredicted RBP27.12■■□□□ 1.93
CDHR3-210ENST00000474330 RBM6P78332 1123 aaKnown RBP27.12■■□□□ 1.93
CDHR3-210ENST00000474330 ATRNO75882 1429 aa27.12■■□□□ 1.93
CDHR3-210ENST00000474330 FAM83GA6ND36 823 aa27.12■■□□□ 1.93
CDHR3-210ENST00000474330 TRPC5Q9UL62 973 aaPredicted RBP27.12■■□□□ 1.93
CDHR3-210ENST00000474330 DIAPH1O60610 1272 aaKnown RBP27.11■■□□□ 1.93
CDHR3-210ENST00000474330 NUDCQ9Y266 331 aa27.11■■□□□ 1.93
CDHR3-210ENST00000474330 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.11■■□□□ 1.93
CDHR3-210ENST00000474330 USP19O94966 1318 aa27.1■■□□□ 1.93
CDHR3-210ENST00000474330 PLCH1Q4KWH8 1693 aa27.1■■□□□ 1.93
CDHR3-210ENST00000474330 LTN1O94822 1766 aa27.09■■□□□ 1.93
CDHR3-210ENST00000474330 ZBED9Q6R2W3 1325 aa27.09■■□□□ 1.93
CDHR3-210ENST00000474330 SOX12O15370 315 aa27.08■■□□□ 1.93
CDHR3-210ENST00000474330 UNC5CLQ8IV45 518 aa27.08■■□□□ 1.93
CDHR3-210ENST00000474330 KCNH5Q8NCM2 988 aa27.08■■□□□ 1.93
CDHR3-210ENST00000474330 PEAK1Q9H792 1746 aa27.08■■□□□ 1.93
CDHR3-210ENST00000474330 MAP3K19Q56UN5 1328 aa27.07■■□□□ 1.92
CDHR3-210ENST00000474330 NFAT5O94916 1531 aa27.07■■□□□ 1.92
CDHR3-210ENST00000474330 NWD2Q9ULI1 1742 aa27.07■■□□□ 1.92
CDHR3-210ENST00000474330 KIF24Q5T7B8 1368 aa27.07■■□□□ 1.92
CDHR3-210ENST00000474330 RGS12O14924 1447 aa27.04■■□□□ 1.92
CDHR3-210ENST00000474330 U2AF1L5P0DN76 240 aaPredicted RBP27.03■■□□□ 1.92
CDHR3-210ENST00000474330 IL13P35225 146 aa27.03■■□□□ 1.92
CDHR3-210ENST00000474330 U2AF1Q01081 240 aaKnown RBP eCLIP27.03■■□□□ 1.92
CDHR3-210ENST00000474330 FLT4P35916 1363 aa27.03■■□□□ 1.92
CDHR3-210ENST00000474330 COL14A1Q05707 1796 aaKnown RBP27.02■■□□□ 1.92
CDHR3-210ENST00000474330 GCP02774 474 aa27.02■■□□□ 1.92
CDHR3-210ENST00000474330 GJD4Q96KN9 370 aaPredicted RBP27.02■■□□□ 1.92
CDHR3-210ENST00000474330 U2SURPO15042 1029 aaKnown RBP27.01■■□□□ 1.92
CDHR3-210ENST00000474330 NRAPQ86VF7 1730 aa27■■□□□ 1.91
CDHR3-210ENST00000474330 AMPHP49418 695 aa27■■□□□ 1.91
CDHR3-210ENST00000474330 GLI3P10071 1580 aa26.99■■□□□ 1.91
CDHR3-210ENST00000474330 HSP90AB2PQ58FF8 381 aa26.99■■□□□ 1.91
CDHR3-210ENST00000474330 CCDC146Q8IYE0 955 aa26.99■■□□□ 1.91
CDHR3-210ENST00000474330 RTL1A6NKG5 1358 aa26.98■■□□□ 1.91
CDHR3-210ENST00000474330 KIAA0232Q92628 1395 aa26.98■■□□□ 1.91
CDHR3-210ENST00000474330 BTG4Q9NY30 223 aa26.98■■□□□ 1.91
CDHR3-210ENST00000474330 ZC3H6P61129 1189 aaKnown RBP26.98■■□□□ 1.91
CDHR3-210ENST00000474330 RUNDC1Q96C34 613 aa26.98■■□□□ 1.91
CDHR3-210ENST00000474330 EIF4A2Q14240 407 aaKnown RBP26.97■■□□□ 1.91
CDHR3-210ENST00000474330 VPS72Q15906 364 aa26.97■■□□□ 1.91
CDHR3-210ENST00000474330 HOXC9P31274 260 aa26.96■■□□□ 1.91
CDHR3-210ENST00000474330 EP400Q96L91 3159 aa26.95■■□□□ 1.91
CDHR3-210ENST00000474330 SENP3-EIF4A1A0A087X0R7 540 aa26.95■■□□□ 1.91
CDHR3-210ENST00000474330 PRDM11Q9NQV5 511 aa26.95■■□□□ 1.91
CDHR3-210ENST00000474330 CHRNA2Q15822 529 aa26.94■■□□□ 1.9
CDHR3-210ENST00000474330 ARHGEF25Q86VW2 580 aa26.94■■□□□ 1.9
CDHR3-210ENST00000474330 PNNQ9H307 717 aaKnown RBP26.94■■□□□ 1.9
CDHR3-210ENST00000474330 APAF1O14727 1248 aa26.94■■□□□ 1.9
CDHR3-210ENST00000474330 FCHSD2O94868 740 aa26.94■■□□□ 1.9
CDHR3-210ENST00000474330 NGEFQ8N5V2 710 aa26.93■■□□□ 1.9
CDHR3-210ENST00000474330 IP6K1Q92551 441 aa26.93■■□□□ 1.9
CDHR3-210ENST00000474330 RGPD1P0DJD0 1748 aa26.92■■□□□ 1.9
CDHR3-210ENST00000474330 PLEKHF1Q96S99 279 aa26.92■■□□□ 1.9
CDHR3-210ENST00000474330 CPDO75976 1380 aa26.91■■□□□ 1.9
CDHR3-210ENST00000474330 RGPD5Q99666 1765 aa26.91■■□□□ 1.9
CDHR3-210ENST00000474330 SALL2Q9Y467 1007 aaPredicted RBP26.9■■□□□ 1.9
CDHR3-210ENST00000474330 RSPH6AQ9H0K4 717 aa26.9■■□□□ 1.9
CDHR3-210ENST00000474330 ABCC6O95255 1503 aa26.9■■□□□ 1.9
CDHR3-210ENST00000474330 COL18A1P39060 1754 aa26.89■■□□□ 1.9
CDHR3-210ENST00000474330 ZBTB7CA1YPR0 619 aa26.89■■□□□ 1.9
CDHR3-210ENST00000474330 LMO7Q8WWI1 1683 aa26.88■■□□□ 1.89
CDHR3-210ENST00000474330 ONECUT3O60422 494 aaPredicted RBP26.88■■□□□ 1.89
CDHR3-210ENST00000474330 TCP11L2Q8N4U5 519 aa26.88■■□□□ 1.89
CDHR3-210ENST00000474330 UPF1Q92900 1129 aaKnown RBP eCLIP26.88■■□□□ 1.89
CDHR3-210ENST00000474330 NCBP3Q53F19 620 aaKnown RBP26.87■■□□□ 1.89
CDHR3-210ENST00000474330 BRWD3Q6RI45 1802 aa26.87■■□□□ 1.89
CDHR3-210ENST00000474330 CAMTA1Q9Y6Y1 1673 aa26.87■■□□□ 1.89
CDHR3-210ENST00000474330 HMOX1P09601 288 aa26.87■■□□□ 1.89
CDHR3-210ENST00000474330 CCDC9Q9Y3X0 531 aaKnown RBP26.87■■□□□ 1.89
CDHR3-210ENST00000474330 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
CDHR3-210ENST00000474330 PRKAR2BP31323 418 aa26.84■■□□□ 1.89
CDHR3-210ENST00000474330 SPATA31A5Q5VU36 1347 aa26.84■■□□□ 1.89
CDHR3-210ENST00000474330 SPATA31A7Q8IWB4 1347 aa26.84■■□□□ 1.89
CDHR3-210ENST00000474330 ZNF521Q96K83 1311 aa26.84■■□□□ 1.89
CDHR3-210ENST00000474330 MAPK8IP3Q9UPT6 1336 aa26.84■■□□□ 1.89
CDHR3-210ENST00000474330 IGSF1Q8N6C5 1336 aa26.83■■□□□ 1.89
CDHR3-210ENST00000474330 SULT6B1Q6IMI4 303 aa26.82■■□□□ 1.88
CDHR3-210ENST00000474330 SEPT12Q8IYM1 358 aa26.82■■□□□ 1.88
CDHR3-210ENST00000474330 EYA1Q99502 592 aa26.82■■□□□ 1.88
CDHR3-210ENST00000474330 NEFMP07197 916 aa26.81■■□□□ 1.88
CDHR3-210ENST00000474330 STRN4Q9NRL3 753 aa26.8■■□□□ 1.88
CDHR3-210ENST00000474330 KDRP35968 1356 aa26.8■■□□□ 1.88
CDHR3-210ENST00000474330 CCDC27Q2M243 656 aa26.79■■□□□ 1.88
CDHR3-210ENST00000474330 TMPOP42166 694 aaKnown RBP26.79■■□□□ 1.88
CDHR3-210ENST00000474330 FAM98CQ17RN3 349 aaKnown RBP26.79■■□□□ 1.88
CDHR3-210ENST00000474330 AEBP1Q8IUX7 1158 aa26.79■■□□□ 1.88
CDHR3-210ENST00000474330 LTV1Q96GA3 475 aaPredicted RBP26.79■■□□□ 1.88
CDHR3-210ENST00000474330 FAM208AQ9UK61 1670 aaKnown RBP26.79■■□□□ 1.88
CDHR3-210ENST00000474330 SPATA31A1Q5TZJ5 1347 aa26.78■■□□□ 1.88
CDHR3-210ENST00000474330 AXIN2Q9Y2T1 843 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms