RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 PDE3BQ13370 1112 aa28.57■■■□□ 2.16
SNX13-206ENST00000474067 ANKRD36BQ8N2N9 1353 aa28.57■■■□□ 2.16
SNX13-206ENST00000474067 TOM1L2Q6ZVM7 507 aa28.56■■■□□ 2.16
SNX13-206ENST00000474067 SOX12O15370 315 aa28.55■■■□□ 2.16
SNX13-206ENST00000474067 CDCA7Q9BWT1 371 aaPredicted RBP28.55■■■□□ 2.16
SNX13-206ENST00000474067 WDR17Q8IZU2 1322 aa28.54■■■□□ 2.16
SNX13-206ENST00000474067 FAM196AQ6ZSG2 479 aa28.54■■■□□ 2.16
SNX13-206ENST00000474067 NFAT5O94916 1531 aa28.53■■■□□ 2.16
SNX13-206ENST00000474067 CSB-PGBD3P0DP91 1061 aa28.53■■■□□ 2.16
SNX13-206ENST00000474067 BAG6P46379 1132 aa28.53■■■□□ 2.16
SNX13-206ENST00000474067 NME9Q86XW9 330 aa28.53■■■□□ 2.16
SNX13-206ENST00000474067 COG3Q96JB2 828 aa28.51■■■□□ 2.15
SNX13-206ENST00000474067 ZRANB1Q9UGI0 708 aa28.51■■■□□ 2.15
SNX13-206ENST00000474067 COL18A1P39060 1754 aa28.5■■■□□ 2.15
SNX13-206ENST00000474067 RGPD1P0DJD0 1748 aa28.49■■■□□ 2.15
SNX13-206ENST00000474067 OVOS2A0A0J9YW53 1432 aa28.48■■■□□ 2.15
SNX13-206ENST00000474067 OVOS2Q6IE36 1432 aa28.48■■■□□ 2.15
SNX13-206ENST00000474067 EIF4G2P78344 907 aaKnown RBP eCLIP28.47■■■□□ 2.15
SNX13-206ENST00000474067 CCDC7Q96M83 1385 aa28.47■■■□□ 2.15
SNX13-206ENST00000474067 PARP4Q9UKK3 1724 aaKnown RBP28.46■■■□□ 2.15
SNX13-206ENST00000474067 CARD10Q9BWT7 1032 aa28.46■■■□□ 2.15
SNX13-206ENST00000474067 AXIN2Q9Y2T1 843 aa28.45■■■□□ 2.14
SNX13-206ENST00000474067 DDB1Q16531 1140 aa28.43■■■□□ 2.14
SNX13-206ENST00000474067 LTN1O94822 1766 aa28.42■■■□□ 2.14
SNX13-206ENST00000474067 EP400Q96L91 3159 aa28.42■■■□□ 2.14
SNX13-206ENST00000474067 ERBB3P21860 1342 aa28.4■■■□□ 2.14
SNX13-206ENST00000474067 OVOS2A0A0G2JMS6 1433 aa28.39■■■□□ 2.14
SNX13-206ENST00000474067 DISP2A7MBM2 1401 aa28.38■■■□□ 2.13
SNX13-206ENST00000474067 RGPD5Q99666 1765 aa28.38■■■□□ 2.13
SNX13-206ENST00000474067 DEFB132Q7Z7B7 95 aa28.38■■■□□ 2.13
SNX13-206ENST00000474067 PARD3Q8TEW0 1356 aa28.37■■■□□ 2.13
SNX13-206ENST00000474067 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
SNX13-206ENST00000474067 IP6K1Q92551 441 aa28.36■■■□□ 2.13
SNX13-206ENST00000474067 WNK3Q9BYP7 1800 aa28.36■■■□□ 2.13
SNX13-206ENST00000474067 AMPHP49418 695 aa28.35■■■□□ 2.13
SNX13-206ENST00000474067 EXOC5O00471 708 aa28.34■■■□□ 2.13
SNX13-206ENST00000474067 ANKRD24Q8TF21 1146 aa28.34■■■□□ 2.13
SNX13-206ENST00000474067 NLRP2Q9NX02 1062 aa28.34■■■□□ 2.13
SNX13-206ENST00000474067 RTL1A6NKG5 1358 aa28.34■■■□□ 2.13
SNX13-206ENST00000474067 LRRC37A3O60309 1634 aa28.33■■■□□ 2.13
SNX13-206ENST00000474067 FAM208AQ9UK61 1670 aaKnown RBP28.33■■■□□ 2.13
SNX13-206ENST00000474067 TRIM37O94972 964 aa28.33■■■□□ 2.13
SNX13-206ENST00000474067 FYB1O15117 783 aa28.32■■■□□ 2.12
SNX13-206ENST00000474067 TNS1Q9HBL0 1735 aaKnown RBP28.31■■■□□ 2.12
SNX13-206ENST00000474067 KIF20BQ96Q89 1820 aa28.31■■■□□ 2.12
SNX13-206ENST00000474067 MYOM1P52179 1685 aa28.3■■■□□ 2.12
SNX13-206ENST00000474067 APBA3O96018 575 aa28.3■■■□□ 2.12
SNX13-206ENST00000474067 SMG6Q86US8 1419 aaKnown RBP28.29■■■□□ 2.12
SNX13-206ENST00000474067 KIF24Q5T7B8 1368 aa28.29■■■□□ 2.12
SNX13-206ENST00000474067 CGNL1Q0VF96 1302 aa28.29■■■□□ 2.12
SNX13-206ENST00000474067 HSPA5P11021 654 aaKnown RBP28.29■■■□□ 2.12
SNX13-206ENST00000474067 GGNBP2Q9H3C7 697 aa28.29■■■□□ 2.12
SNX13-206ENST00000474067 NSD3Q9BZ95 1437 aa28.28■■■□□ 2.12
SNX13-206ENST00000474067 MAP3K19Q56UN5 1328 aa28.28■■■□□ 2.12
SNX13-206ENST00000474067 IL2RBP14784 551 aa28.28■■■□□ 2.12
SNX13-206ENST00000474067 EN1Q05925 392 aaPredicted RBP28.28■■■□□ 2.12
SNX13-206ENST00000474067 POLR3GLQ9BT43 218 aa28.28■■■□□ 2.12
SNX13-206ENST00000474067 BCL9O00512 1426 aa28.27■■■□□ 2.12
SNX13-206ENST00000474067 HOXC9P31274 260 aa28.26■■■□□ 2.11
SNX13-206ENST00000474067 TNS2Q63HR2 1409 aa28.26■■■□□ 2.11
SNX13-206ENST00000474067 PEAK1Q9H792 1746 aa28.21■■■□□ 2.11
SNX13-206ENST00000474067 LTV1Q96GA3 475 aaPredicted RBP28.2■■■□□ 2.1
SNX13-206ENST00000474067 CARD14Q9BXL6 1004 aa28.2■■■□□ 2.1
SNX13-206ENST00000474067 BCL11BQ9C0K0 894 aaPredicted RBP28.2■■■□□ 2.1
SNX13-206ENST00000474067 FLT4P35916 1363 aa28.2■■■□□ 2.1
SNX13-206ENST00000474067 NBPF14Q5TI25 921 aa28.19■■■□□ 2.1
SNX13-206ENST00000474067 CAMKK2Q96RR4 588 aa28.19■■■□□ 2.1
SNX13-206ENST00000474067 EZH2Q15910 746 aaKnown RBP28.18■■■□□ 2.1
SNX13-206ENST00000474067 MARCH10Q8NA82 808 aaPredicted RBP28.18■■■□□ 2.1
SNX13-206ENST00000474067 RRS1Q15050 365 aaKnown RBP28.17■■■□□ 2.1
SNX13-206ENST00000474067 RGPD3A6NKT7 1758 aaPredicted RBP28.16■■■□□ 2.1
SNX13-206ENST00000474067 RGPD4Q7Z3J3 1758 aa28.16■■■□□ 2.1
SNX13-206ENST00000474067 INSRP06213 1382 aa28.16■■■□□ 2.1
SNX13-206ENST00000474067 PLSCR1O15162 318 aa28.16■■■□□ 2.1
SNX13-206ENST00000474067 NSD2O96028 1365 aa28.15■■■□□ 2.1
SNX13-206ENST00000474067 SBF2Q86WG5 1849 aa28.14■■■□□ 2.1
SNX13-206ENST00000474067 RREB1Q92766 1687 aa28.1■■■□□ 2.09
SNX13-206ENST00000474067 RAPGEF4Q8WZA2 1011 aa28.1■■■□□ 2.09
SNX13-206ENST00000474067 FBLN1P23142 703 aa28.09■■■□□ 2.09
SNX13-206ENST00000474067 PANK3Q9H999 370 aa28.09■■■□□ 2.09
SNX13-206ENST00000474067 ANKRD26Q9UPS8 1709 aa28.09■■■□□ 2.09
SNX13-206ENST00000474067 KNSTRNQ9Y448 316 aa28.07■■■□□ 2.08
SNX13-206ENST00000474067 PPM1GO15355 546 aaPredicted RBP28.05■■■□□ 2.08
SNX13-206ENST00000474067 TATP17735 454 aaPredicted RBP28.05■■■□□ 2.08
SNX13-206ENST00000474067 HSP90AB2PQ58FF8 381 aa28.05■■■□□ 2.08
SNX13-206ENST00000474067 NHSQ6T4R5 1651 aa28.04■■■□□ 2.08
SNX13-206ENST00000474067 WASHC2AQ641Q2 1341 aa28.04■■■□□ 2.08
SNX13-206ENST00000474067 PSDA5PKW4 1024 aaPredicted RBP28.04■■■□□ 2.08
SNX13-206ENST00000474067 R3HDM1Q15032 1099 aaKnown RBP28.04■■■□□ 2.08
SNX13-206ENST00000474067 ZCRB1Q8TBF4 217 aaKnown RBP28.04■■■□□ 2.08
SNX13-206ENST00000474067 DDX54Q8TDD1 881 aaKnown RBP28.03■■■□□ 2.08
SNX13-206ENST00000474067 NUP188Q5SRE5 1749 aa28.03■■■□□ 2.08
SNX13-206ENST00000474067 NBPF6Q5VWK0 638 aa28.02■■■□□ 2.08
SNX13-206ENST00000474067 NBPF4Q96M43 638 aa28.02■■■□□ 2.08
SNX13-206ENST00000474067 EMILIN1Q9Y6C2 1016 aa28.02■■■□□ 2.08
SNX13-206ENST00000474067 LRP5O75197 1615 aa28.01■■■□□ 2.07
SNX13-206ENST00000474067 MAP2P11137 1827 aaKnown RBP28■■■□□ 2.07
SNX13-206ENST00000474067 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
SNX13-206ENST00000474067 HMGB2P26583 209 aaKnown RBP27.98■■■□□ 2.07
SNX13-206ENST00000474067 MORC1Q86VD1 984 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms