RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
FN1-219ENST00000474036 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
FN1-219ENST00000474036 CFTRP13569 1480 aa9.52□□□□□ -0.89
FN1-219ENST00000474036 RSF1Q96T23 1441 aaPredicted RBP9.51□□□□□ -0.89
FN1-219ENST00000474036 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
FN1-219ENST00000474036 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
FN1-219ENST00000474036 PURBQ96QR8 312 aaKnown RBP9.51□□□□□ -0.89
FN1-219ENST00000474036 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
FN1-219ENST00000474036 AGERQ15109 404 aa9.5□□□□□ -0.89
FN1-219ENST00000474036 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
FN1-219ENST00000474036 C1QTNF2Q9BXJ5 285 aa9.5□□□□□ -0.89
FN1-219ENST00000474036 NXF1Q9UBU9 619 aaKnown RBP9.5□□□□□ -0.89
FN1-219ENST00000474036 PROCA1Q8NCQ7 364 aaPredicted RBP9.49□□□□□ -0.89
FN1-219ENST00000474036 KIF13AQ9H1H9 1805 aa9.48□□□□□ -0.89
FN1-219ENST00000474036 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
FN1-219ENST00000474036 SH3BP5LQ7L8J4 393 aa9.48□□□□□ -0.89
FN1-219ENST00000474036 BPHLQ86WA6 291 aaPredicted RBP9.48□□□□□ -0.89
FN1-219ENST00000474036 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.891e-15■■■■■ 36.4
FN1-219ENST00000474036 TOPBP1Q92547 1522 aa9.47□□□□□ -0.89
FN1-219ENST00000474036 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
FN1-219ENST00000474036 FAM117AQ9C073 453 aa9.47□□□□□ -0.89
FN1-219ENST00000474036 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
FN1-219ENST00000474036 GMPRP36959 345 aa9.46□□□□□ -0.9
FN1-219ENST00000474036 HELBQ8NG08 1087 aaPredicted RBP9.46□□□□□ -0.9
FN1-219ENST00000474036 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
FN1-219ENST00000474036 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
FN1-219ENST00000474036 NR5A1Q13285 461 aa9.45□□□□□ -0.9
FN1-219ENST00000474036 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
FN1-219ENST00000474036 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
FN1-219ENST00000474036 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
FN1-219ENST00000474036 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
FN1-219ENST00000474036 H3BM21 787 aa9.44□□□□□ -0.9
FN1-219ENST00000474036 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
FN1-219ENST00000474036 CARD14Q9BXL6 1004 aa9.44□□□□□ -0.9
FN1-219ENST00000474036 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
FN1-219ENST00000474036 FSHRP23945 695 aa9.43□□□□□ -0.9
FN1-219ENST00000474036 DNMBPQ6XZF7 1577 aa9.42□□□□□ -0.9
FN1-219ENST00000474036 SCARF1Q14162 830 aa9.42□□□□□ -0.9
FN1-219ENST00000474036 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
FN1-219ENST00000474036 TRMT44Q8IYL2 757 aaKnown RBP9.42□□□□□ -0.9
FN1-219ENST00000474036 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
FN1-219ENST00000474036 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
FN1-219ENST00000474036 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
FN1-219ENST00000474036 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
FN1-219ENST00000474036 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
FN1-219ENST00000474036 NBPF14Q5TI25 921 aa9.41□□□□□ -0.9
FN1-219ENST00000474036 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
FN1-219ENST00000474036 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
FN1-219ENST00000474036 NR6A1Q15406 480 aa9.4□□□□□ -0.9
FN1-219ENST00000474036 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
FN1-219ENST00000474036 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
FN1-219ENST00000474036 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
FN1-219ENST00000474036 EPS8L1Q8TE68 723 aa9.4□□□□□ -0.9
FN1-219ENST00000474036 STK17AQ9UEE5 414 aa9.4□□□□□ -0.9
FN1-219ENST00000474036 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
FN1-219ENST00000474036 TSPOAP1O95153 1857 aa9.4□□□□□ -0.91
FN1-219ENST00000474036 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.91
FN1-219ENST00000474036 NPAS3Q8IXF0 933 aa9.39□□□□□ -0.91
FN1-219ENST00000474036 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
FN1-219ENST00000474036 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
FN1-219ENST00000474036 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
FN1-219ENST00000474036 IRF7Q92985 503 aa9.38□□□□□ -0.91
FN1-219ENST00000474036 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
FN1-219ENST00000474036 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
FN1-219ENST00000474036 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
FN1-219ENST00000474036 BMP2P12643 396 aa9.36□□□□□ -0.91
FN1-219ENST00000474036 CBLBQ13191 982 aa9.36□□□□□ -0.91
FN1-219ENST00000474036 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
FN1-219ENST00000474036 DNMT3LQ9UJW3 386 aa9.36□□□□□ -0.91
FN1-219ENST00000474036 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
FN1-219ENST00000474036 NEUROD2Q15784 382 aa9.35□□□□□ -0.91
FN1-219ENST00000474036 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
FN1-219ENST00000474036 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
FN1-219ENST00000474036 GPKOWQ92917 476 aaPredicted RBP eCLIP9.35□□□□□ -0.91
FN1-219ENST00000474036 ARHGAP9Q9BRR9 750 aa9.35□□□□□ -0.91
FN1-219ENST00000474036 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
FN1-219ENST00000474036 ERCC6L2Q5T890 1561 aa9.34□□□□□ -0.91
FN1-219ENST00000474036 MAN1A2O60476 641 aa9.34□□□□□ -0.91
FN1-219ENST00000474036 AP1G2O75843 785 aa9.34□□□□□ -0.91
FN1-219ENST00000474036 PPP1R26Q5T8A7 1209 aaPredicted RBP9.34□□□□□ -0.91
FN1-219ENST00000474036 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
FN1-219ENST00000474036 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
FN1-219ENST00000474036 EMILIN1Q9Y6C2 1016 aa9.33□□□□□ -0.92
FN1-219ENST00000474036 TDRD9Q8NDG6 1382 aaKnown RBP9.33□□□□□ -0.92
FN1-219ENST00000474036 POLA1P09884 1462 aaPredicted RBP9.33□□□□□ -0.92
FN1-219ENST00000474036 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
FN1-219ENST00000474036 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
FN1-219ENST00000474036 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
FN1-219ENST00000474036 KDM6BO15054 1643 aa9.31□□□□□ -0.92
FN1-219ENST00000474036 KCTD15Q96SI1 283 aaPredicted RBP9.31□□□□□ -0.92
FN1-219ENST00000474036 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
FN1-219ENST00000474036 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
FN1-219ENST00000474036 Q6ZVU0 165 aa9.3□□□□□ -0.92
FN1-219ENST00000474036 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
FN1-219ENST00000474036 UPP2O95045 317 aa9.29□□□□□ -0.92
FN1-219ENST00000474036 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
FN1-219ENST00000474036 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
FN1-219ENST00000474036 AGBL1Q96MI9 1066 aa9.29□□□□□ -0.92
FN1-219ENST00000474036 TSEN34Q9BSV6 310 aaKnown RBP9.29□□□□□ -0.92
FN1-219ENST00000474036 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms