RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SPATA31A1Q5TZJ5 1347 aa18.21■□□□□ 0.51
BRAT1-205ENST00000473879 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
BRAT1-205ENST00000473879 THSD7AQ9UPZ6 1657 aa18.19■□□□□ 0.5
BRAT1-205ENST00000473879 ARHGEF25Q86VW2 580 aa18.19■□□□□ 0.5
BRAT1-205ENST00000473879 NME9Q86XW9 330 aa18.19■□□□□ 0.5
BRAT1-205ENST00000473879 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
BRAT1-205ENST00000473879 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
BRAT1-205ENST00000473879 ZBTB7CA1YPR0 619 aa18.17■□□□□ 0.5
BRAT1-205ENST00000473879 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
BRAT1-205ENST00000473879 COL5A2P05997 1499 aaPredicted RBP18.17■□□□□ 0.5
BRAT1-205ENST00000473879 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
BRAT1-205ENST00000473879 KRT27Q7Z3Y8 459 aa18.16■□□□□ 0.5
BRAT1-205ENST00000473879 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
BRAT1-205ENST00000473879 A0A0G2JS52 829 aa18.15■□□□□ 0.5
BRAT1-205ENST00000473879 SOX12O15370 315 aa18.15■□□□□ 0.5
BRAT1-205ENST00000473879 MYT1Q01538 1121 aa18.15■□□□□ 0.5
BRAT1-205ENST00000473879 BARGINQ6ZT62 677 aa18.15■□□□□ 0.5
BRAT1-205ENST00000473879 CCDC125Q86Z20 511 aa18.15■□□□□ 0.5
BRAT1-205ENST00000473879 AXIN2Q9Y2T1 843 aa18.14■□□□□ 0.49
BRAT1-205ENST00000473879 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
BRAT1-205ENST00000473879 LTN1O94822 1766 aa18.14■□□□□ 0.49
BRAT1-205ENST00000473879 RGPD5Q99666 1765 aa18.14■□□□□ 0.49
BRAT1-205ENST00000473879 TCP11L2Q8N4U5 519 aa18.13■□□□□ 0.49
BRAT1-205ENST00000473879 USP35Q9P2H5 1018 aa18.13■□□□□ 0.49
BRAT1-205ENST00000473879 WNK3Q9BYP7 1800 aa18.13■□□□□ 0.49
BRAT1-205ENST00000473879 CRB1P82279 1406 aa18.13■□□□□ 0.49
BRAT1-205ENST00000473879 FYB1O15117 783 aa18.12■□□□□ 0.49
BRAT1-205ENST00000473879 SRCAPQ6ZRS2 3230 aa18.11■□□□□ 0.49
BRAT1-205ENST00000473879 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
BRAT1-205ENST00000473879 ANP32CO43423 234 aa18.1■□□□□ 0.49
BRAT1-205ENST00000473879 COG3Q96JB2 828 aa18.1■□□□□ 0.49
BRAT1-205ENST00000473879 BLMP54132 1417 aaPredicted RBP18.09■□□□□ 0.49
BRAT1-205ENST00000473879 TOM1L2Q6ZVM7 507 aa18.09■□□□□ 0.49
BRAT1-205ENST00000473879 PANK3Q9H999 370 aa18.09■□□□□ 0.49
BRAT1-205ENST00000473879 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
BRAT1-205ENST00000473879 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
BRAT1-205ENST00000473879 NSD2O96028 1365 aa18.06■□□□□ 0.48
BRAT1-205ENST00000473879 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
BRAT1-205ENST00000473879 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
BRAT1-205ENST00000473879 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
BRAT1-205ENST00000473879 KNSTRNQ9Y448 316 aa18.05■□□□□ 0.48
BRAT1-205ENST00000473879 RGPD1P0DJD0 1748 aa18.05■□□□□ 0.48
BRAT1-205ENST00000473879 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
BRAT1-205ENST00000473879 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
BRAT1-205ENST00000473879 PDE3BQ13370 1112 aa18.04■□□□□ 0.48
BRAT1-205ENST00000473879 SF3B2Q13435 895 aaKnown RBP18.04■□□□□ 0.48
BRAT1-205ENST00000473879 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
BRAT1-205ENST00000473879 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
BRAT1-205ENST00000473879 ERBB3P21860 1342 aa18.03■□□□□ 0.48
BRAT1-205ENST00000473879 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
BRAT1-205ENST00000473879 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
BRAT1-205ENST00000473879 FAM182BQ5T319 152 aa18.03■□□□□ 0.48
BRAT1-205ENST00000473879 IP6K1Q92551 441 aa18.03■□□□□ 0.48
BRAT1-205ENST00000473879 CDCA7Q9BWT1 371 aaPredicted RBP18.03■□□□□ 0.48
BRAT1-205ENST00000473879 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
BRAT1-205ENST00000473879 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
BRAT1-205ENST00000473879 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
BRAT1-205ENST00000473879 FAM196AQ6ZSG2 479 aa18.02■□□□□ 0.48
BRAT1-205ENST00000473879 MIER1Q8N108 512 aa18.02■□□□□ 0.48
BRAT1-205ENST00000473879 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
BRAT1-205ENST00000473879 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
BRAT1-205ENST00000473879 MAP3K19Q56UN5 1328 aa18■□□□□ 0.47
BRAT1-205ENST00000473879 FBLN1P23142 703 aa17.99■□□□□ 0.47
BRAT1-205ENST00000473879 AMPHP49418 695 aa17.99■□□□□ 0.47
BRAT1-205ENST00000473879 DDB1Q16531 1140 aa17.99■□□□□ 0.47
BRAT1-205ENST00000473879 PRKRIP1Q9H875 184 aaPredicted RBP17.99■□□□□ 0.47
BRAT1-205ENST00000473879 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
BRAT1-205ENST00000473879 HOXC9P31274 260 aa17.98■□□□□ 0.47
BRAT1-205ENST00000473879 DEFB132Q7Z7B7 95 aa17.98■□□□□ 0.47
BRAT1-205ENST00000473879 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
BRAT1-205ENST00000473879 RALBP1Q15311 655 aa17.97■□□□□ 0.47
BRAT1-205ENST00000473879 MAP2P11137 1827 aaKnown RBP17.97■□□□□ 0.47
BRAT1-205ENST00000473879 BAG6P46379 1132 aa17.96■□□□□ 0.47
BRAT1-205ENST00000473879 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
BRAT1-205ENST00000473879 NCAPD2Q15021 1401 aa17.96■□□□□ 0.47
BRAT1-205ENST00000473879 PARD3Q8TEW0 1356 aa17.95■□□□□ 0.46
BRAT1-205ENST00000473879 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
BRAT1-205ENST00000473879 EXOC5O00471 708 aa17.94■□□□□ 0.46
BRAT1-205ENST00000473879 TRIM37O94972 964 aa17.94■□□□□ 0.46
BRAT1-205ENST00000473879 OVOS2A0A0G2JMS6 1433 aa17.94■□□□□ 0.46
BRAT1-205ENST00000473879 FLT4P35916 1363 aa17.93■□□□□ 0.46
BRAT1-205ENST00000473879 IL2RBP14784 551 aa17.93■□□□□ 0.46
BRAT1-205ENST00000473879 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
BRAT1-205ENST00000473879 LTV1Q96GA3 475 aaPredicted RBP17.93■□□□□ 0.46
BRAT1-205ENST00000473879 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
BRAT1-205ENST00000473879 INSRP06213 1382 aa17.92■□□□□ 0.46
BRAT1-205ENST00000473879 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
BRAT1-205ENST00000473879 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
BRAT1-205ENST00000473879 RGPD2P0DJD1 1756 aa17.91■□□□□ 0.46
BRAT1-205ENST00000473879 BCL9O00512 1426 aa17.91■□□□□ 0.46
BRAT1-205ENST00000473879 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
BRAT1-205ENST00000473879 TNS2Q63HR2 1409 aa17.9■□□□□ 0.46
BRAT1-205ENST00000473879 EN1Q05925 392 aaPredicted RBP17.9■□□□□ 0.46
BRAT1-205ENST00000473879 POLKQ9UBT6 870 aa17.9■□□□□ 0.46
BRAT1-205ENST00000473879 APBA3O96018 575 aa17.89■□□□□ 0.45
BRAT1-205ENST00000473879 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
BRAT1-205ENST00000473879 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
BRAT1-205ENST00000473879 RREB1Q92766 1687 aa17.87■□□□□ 0.45
BRAT1-205ENST00000473879 RGPD3A6NKT7 1758 aaPredicted RBP17.87■□□□□ 0.45
BRAT1-205ENST00000473879 RGPD4Q7Z3J3 1758 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms