RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 WDR17Q8IZU2 1322 aa27.67■■■□□ 2.02
APTX-218ENST00000473270 PPP1R1BQ9UD71 204 aaPredicted RBP27.66■■■□□ 2.02
APTX-218ENST00000473270 KTN1Q86UP2 1357 aaKnown RBP27.65■■■□□ 2.02
APTX-218ENST00000473270 PARP4Q9UKK3 1724 aaKnown RBP27.65■■■□□ 2.02
APTX-218ENST00000473270 DCAF8L1A6NGE4 600 aa27.63■■■□□ 2.01
APTX-218ENST00000473270 CPSF1Q10570 1443 aaKnown RBP27.63■■■□□ 2.01
APTX-218ENST00000473270 ARHGEF25Q86VW2 580 aa27.62■■■□□ 2.01
APTX-218ENST00000473270 SPON1Q9HCB6 807 aa27.61■■■□□ 2.01
APTX-218ENST00000473270 PIK3C2AO00443 1686 aa27.6■■■□□ 2.01
APTX-218ENST00000473270 CARD11Q9BXL7 1154 aa27.6■■■□□ 2.01
APTX-218ENST00000473270 BCL11BQ9C0K0 894 aaPredicted RBP27.6■■■□□ 2.01
APTX-218ENST00000473270 AXIN2Q9Y2T1 843 aa27.6■■■□□ 2.01
APTX-218ENST00000473270 EXOC5O00471 708 aa27.59■■■□□ 2.01
APTX-218ENST00000473270 PLSCR1O15162 318 aa27.59■■■□□ 2.01
APTX-218ENST00000473270 CARD10Q9BWT7 1032 aa27.59■■■□□ 2.01
APTX-218ENST00000473270 HDGFL2Q7Z4V5 671 aaPredicted RBP27.58■■■□□ 2.01
APTX-218ENST00000473270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.58■■■□□ 2.01
APTX-218ENST00000473270 TMC1Q8TDI8 760 aa27.58■■■□□ 2.01
APTX-218ENST00000473270 RREB1Q92766 1687 aa27.58■■■□□ 2.01
APTX-218ENST00000473270 CCDC7Q96M83 1385 aa27.55■■■□□ 2
APTX-218ENST00000473270 NUP188Q5SRE5 1749 aa27.55■■■□□ 2
APTX-218ENST00000473270 KCNQ2O43526 872 aa27.54■■■□□ 2
APTX-218ENST00000473270 LRRC37A3O60309 1634 aa27.53■■■□□ 2
APTX-218ENST00000473270 TONSLQ96HA7 1378 aa27.53■■■□□ 2
APTX-218ENST00000473270 MARCH10Q8NA82 808 aaPredicted RBP27.52■■■□□ 2
APTX-218ENST00000473270 TERF2IPQ9NYB0 399 aa27.52■■■□□ 2
APTX-218ENST00000473270 AKAP12Q02952 1782 aa27.52■■■□□ 2
APTX-218ENST00000473270 SBNO2Q9Y2G9 1366 aa27.51■■□□□ 1.99
APTX-218ENST00000473270 NLRP2Q9NX02 1062 aa27.5■■□□□ 1.99
APTX-218ENST00000473270 COL18A1P39060 1754 aa27.5■■□□□ 1.99
APTX-218ENST00000473270 PEAK1Q9H792 1746 aa27.47■■□□□ 1.99
APTX-218ENST00000473270 BCL9O00512 1426 aa27.47■■□□□ 1.99
APTX-218ENST00000473270 ABCC6O95255 1503 aa27.46■■□□□ 1.99
APTX-218ENST00000473270 STK32BQ9NY57 414 aa27.46■■□□□ 1.99
APTX-218ENST00000473270 RGPD3A6NKT7 1758 aaPredicted RBP27.45■■□□□ 1.99
APTX-218ENST00000473270 RGPD4Q7Z3J3 1758 aa27.45■■□□□ 1.99
APTX-218ENST00000473270 SLC24A1O60721 1099 aa27.45■■□□□ 1.98
APTX-218ENST00000473270 TIMELESSQ9UNS1 1208 aa27.45■■□□□ 1.98
APTX-218ENST00000473270 NME9Q86XW9 330 aa27.44■■□□□ 1.98
APTX-218ENST00000473270 NFAT5O94916 1531 aa27.44■■□□□ 1.98
APTX-218ENST00000473270 USP31Q70CQ4 1352 aa27.44■■□□□ 1.98
APTX-218ENST00000473270 WNK3Q9BYP7 1800 aa27.43■■□□□ 1.98
APTX-218ENST00000473270 SBF2Q86WG5 1849 aa27.42■■□□□ 1.98
APTX-218ENST00000473270 IL2RBP14784 551 aa27.42■■□□□ 1.98
APTX-218ENST00000473270 SLC12A5Q9H2X9 1139 aa27.42■■□□□ 1.98
APTX-218ENST00000473270 NINLQ9Y2I6 1382 aa27.42■■□□□ 1.98
APTX-218ENST00000473270 RGPD5Q99666 1765 aa27.42■■□□□ 1.98
APTX-218ENST00000473270 ERBB3P21860 1342 aa27.41■■□□□ 1.98
APTX-218ENST00000473270 EDC4Q6P2E9 1401 aaKnown RBP27.41■■□□□ 1.98
APTX-218ENST00000473270 TXNRD1Q16881 649 aa27.41■■□□□ 1.98
APTX-218ENST00000473270 MON2Q7Z3U7 1717 aa27.41■■□□□ 1.98
APTX-218ENST00000473270 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
APTX-218ENST00000473270 YY1P25490 414 aa27.4■■□□□ 1.98
APTX-218ENST00000473270 PTF1AQ7RTS3 328 aa27.4■■□□□ 1.98
APTX-218ENST00000473270 ANKRD24Q8TF21 1146 aa27.4■■□□□ 1.98
APTX-218ENST00000473270 PUS7Q96PZ0 661 aaKnown RBP27.4■■□□□ 1.98
APTX-218ENST00000473270 ANO8Q9HCE9 1232 aaPredicted RBP27.39■■□□□ 1.98
APTX-218ENST00000473270 ACSBG1Q96GR2 724 aa27.37■■□□□ 1.97
APTX-218ENST00000473270 ZBTB7AO95365 584 aa27.36■■□□□ 1.97
APTX-218ENST00000473270 SLC15A2Q16348 729 aa27.35■■□□□ 1.97
APTX-218ENST00000473270 PROM2Q8N271 834 aa27.35■■□□□ 1.97
APTX-218ENST00000473270 COG3Q96JB2 828 aa27.34■■□□□ 1.97
APTX-218ENST00000473270 A0A1W2PP64 1363 aa27.33■■□□□ 1.97
APTX-218ENST00000473270 CD163L1Q9NR16 1453 aa27.32■■□□□ 1.96
APTX-218ENST00000473270 ATF5Q9Y2D1 282 aaPredicted RBP27.31■■□□□ 1.96
APTX-218ENST00000473270 IP6K1Q92551 441 aa27.3■■□□□ 1.96
APTX-218ENST00000473270 LTV1Q96GA3 475 aaPredicted RBP27.3■■□□□ 1.96
APTX-218ENST00000473270 LTN1O94822 1766 aa27.3■■□□□ 1.96
APTX-218ENST00000473270 AMPHP49418 695 aa27.29■■□□□ 1.96
APTX-218ENST00000473270 USP54Q70EL1 1684 aa27.29■■□□□ 1.96
APTX-218ENST00000473270 DDX54Q8TDD1 881 aaKnown RBP27.28■■□□□ 1.96
APTX-218ENST00000473270 MTFR1LQ9H019 292 aa27.28■■□□□ 1.96
APTX-218ENST00000473270 ST20-MTHFSA0A0A6YYL1 179 aa27.27■■□□□ 1.96
APTX-218ENST00000473270 NHSQ6T4R5 1651 aa27.25■■□□□ 1.95
APTX-218ENST00000473270 PDGFDQ9GZP0 370 aaPredicted RBP27.25■■□□□ 1.95
APTX-218ENST00000473270 CASZ1Q86V15 1759 aa27.23■■□□□ 1.95
APTX-218ENST00000473270 SYTL4Q96C24 671 aaPredicted RBP27.23■■□□□ 1.95
APTX-218ENST00000473270 TMF1P82094 1093 aa27.21■■□□□ 1.95
APTX-218ENST00000473270 KAT6BQ8WYB5 2073 aa27.2■■□□□ 1.95
APTX-218ENST00000473270 PTGER2P43116 358 aa27.2■■□□□ 1.94
APTX-218ENST00000473270 CDCA8Q53HL2 280 aa27.19■■□□□ 1.94
APTX-218ENST00000473270 SLC27A3Q5K4L6 730 aa27.19■■□□□ 1.94
APTX-218ENST00000473270 TESK2Q96S53 571 aa27.19■■□□□ 1.94
APTX-218ENST00000473270 HOXC9P31274 260 aa27.18■■□□□ 1.94
APTX-218ENST00000473270 FHDC1Q9C0D6 1143 aaPredicted RBP27.18■■□□□ 1.94
APTX-218ENST00000473270 FAM208AQ9UK61 1670 aaKnown RBP27.17■■□□□ 1.94
APTX-218ENST00000473270 MAP3K19Q56UN5 1328 aa27.17■■□□□ 1.94
APTX-218ENST00000473270 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
APTX-218ENST00000473270 ZCRB1Q8TBF4 217 aaKnown RBP27.16■■□□□ 1.94
APTX-218ENST00000473270 ARXQ96QS3 562 aa27.16■■□□□ 1.94
APTX-218ENST00000473270 ANKRD36BQ8N2N9 1353 aa27.16■■□□□ 1.94
APTX-218ENST00000473270 SYT17Q9BSW7 474 aa27.15■■□□□ 1.94
APTX-218ENST00000473270 POLD1P28340 1107 aa27.14■■□□□ 1.94
APTX-218ENST00000473270 BTAF1O14981 1849 aa27.13■■□□□ 1.93
APTX-218ENST00000473270 RAPGEF4Q8WZA2 1011 aa27.13■■□□□ 1.93
APTX-218ENST00000473270 TFCP2L1Q9NZI6 479 aa27.13■■□□□ 1.93
APTX-218ENST00000473270 MYOM1P52179 1685 aa27.13■■□□□ 1.93
APTX-218ENST00000473270 RTL1A6NKG5 1358 aa27.12■■□□□ 1.93
APTX-218ENST00000473270 HMGB2P26583 209 aaKnown RBP27.12■■□□□ 1.93
APTX-218ENST00000473270 PRIM1P49642 420 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms