RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 WASLO00401 505 aaPredicted RBP12.82□□□□□ -0.36
SMC4-214ENST00000472991 NLRP6P59044 892 aa12.81□□□□□ -0.36
SMC4-214ENST00000472991 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
SMC4-214ENST00000472991 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
SMC4-214ENST00000472991 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
SMC4-214ENST00000472991 BRINP3Q76B58 766 aa12.8□□□□□ -0.36
SMC4-214ENST00000472991 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
SMC4-214ENST00000472991 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
SMC4-214ENST00000472991 CDK19Q9BWU1 502 aa12.79□□□□□ -0.36
SMC4-214ENST00000472991 MYOM1P52179 1685 aa12.78□□□□□ -0.36
SMC4-214ENST00000472991 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
SMC4-214ENST00000472991 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
SMC4-214ENST00000472991 EVC2Q86UK5 1308 aa12.78□□□□□ -0.36
SMC4-214ENST00000472991 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
SMC4-214ENST00000472991 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
SMC4-214ENST00000472991 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.37
SMC4-214ENST00000472991 TMEM92Q6UXU6 159 aa12.77□□□□□ -0.37
SMC4-214ENST00000472991 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
SMC4-214ENST00000472991 TESK2Q96S53 571 aa12.77□□□□□ -0.37
SMC4-214ENST00000472991 SHPRHQ149N8 1683 aa12.77□□□□□ -0.37
SMC4-214ENST00000472991 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
SMC4-214ENST00000472991 HSPA1LP34931 641 aa12.76□□□□□ -0.37
SMC4-214ENST00000472991 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMC4-214ENST00000472991 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
SMC4-214ENST00000472991 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
SMC4-214ENST00000472991 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
SMC4-214ENST00000472991 PXDNQ92626 1479 aa12.75□□□□□ -0.37
SMC4-214ENST00000472991 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
SMC4-214ENST00000472991 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
SMC4-214ENST00000472991 PMFBP1Q8TBY8 1022 aa12.74□□□□□ -0.37
SMC4-214ENST00000472991 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
SMC4-214ENST00000472991 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
SMC4-214ENST00000472991 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
SMC4-214ENST00000472991 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
SMC4-214ENST00000472991 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
SMC4-214ENST00000472991 FOXO3O43524 673 aa12.72□□□□□ -0.37
SMC4-214ENST00000472991 TMF1P82094 1093 aa12.72□□□□□ -0.37
SMC4-214ENST00000472991 COL22A1Q8NFW1 1626 aaPredicted RBP12.71□□□□□ -0.37
SMC4-214ENST00000472991 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
SMC4-214ENST00000472991 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.37
SMC4-214ENST00000472991 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
SMC4-214ENST00000472991 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
SMC4-214ENST00000472991 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
SMC4-214ENST00000472991 CRYBG1Q9Y4K1 1723 aa12.7□□□□□ -0.38
SMC4-214ENST00000472991 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
SMC4-214ENST00000472991 ACEP12821 1306 aa12.69□□□□□ -0.38
SMC4-214ENST00000472991 EMP3P54852 163 aa12.69□□□□□ -0.38
SMC4-214ENST00000472991 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
SMC4-214ENST00000472991 KIF20BQ96Q89 1820 aa12.68□□□□□ -0.38
SMC4-214ENST00000472991 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
SMC4-214ENST00000472991 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
SMC4-214ENST00000472991 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
SMC4-214ENST00000472991 TNS3Q68CZ2 1445 aa12.68□□□□□ -0.38
SMC4-214ENST00000472991 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
SMC4-214ENST00000472991 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
SMC4-214ENST00000472991 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
SMC4-214ENST00000472991 PSME1Q06323 249 aa12.67□□□□□ -0.38
SMC4-214ENST00000472991 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
SMC4-214ENST00000472991 PUS7Q96PZ0 661 aaKnown RBP12.67□□□□□ -0.38
SMC4-214ENST00000472991 JCADQ9P266 1359 aa12.67□□□□□ -0.38
SMC4-214ENST00000472991 USP6P35125 1406 aa12.66□□□□□ -0.38
SMC4-214ENST00000472991 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
SMC4-214ENST00000472991 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
SMC4-214ENST00000472991 SBNO1A3KN83 1393 aa12.66□□□□□ -0.38
SMC4-214ENST00000472991 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
SMC4-214ENST00000472991 NINLQ9Y2I6 1382 aa12.66□□□□□ -0.38
SMC4-214ENST00000472991 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
SMC4-214ENST00000472991 LRRC59Q96AG4 307 aaKnown RBP12.65□□□□□ -0.38
SMC4-214ENST00000472991 POLR3GLQ9BT43 218 aa12.65□□□□□ -0.38
SMC4-214ENST00000472991 SLC12A5Q9H2X9 1139 aa12.65□□□□□ -0.38
SMC4-214ENST00000472991 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
SMC4-214ENST00000472991 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
SMC4-214ENST00000472991 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
SMC4-214ENST00000472991 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
SMC4-214ENST00000472991 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
SMC4-214ENST00000472991 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
SMC4-214ENST00000472991 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
SMC4-214ENST00000472991 C11orf95C9JLR9 678 aaPredicted RBP12.63□□□□□ -0.39
SMC4-214ENST00000472991 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
SMC4-214ENST00000472991 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
SMC4-214ENST00000472991 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
SMC4-214ENST00000472991 LRP6O75581 1613 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 LMOD2Q6P5Q4 547 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 KIF7Q2M1P5 1343 aa12.62□□□□□ -0.39
SMC4-214ENST00000472991 BRD4O60885 1362 aaPredicted RBP12.61□□□□□ -0.39
SMC4-214ENST00000472991 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
SMC4-214ENST00000472991 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
SMC4-214ENST00000472991 EDC4Q6P2E9 1401 aaKnown RBP12.61□□□□□ -0.39
SMC4-214ENST00000472991 CCDC7Q96M83 1385 aa12.6□□□□□ -0.39
SMC4-214ENST00000472991 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
SMC4-214ENST00000472991 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
SMC4-214ENST00000472991 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
SMC4-214ENST00000472991 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
SMC4-214ENST00000472991 LTN1O94822 1766 aa12.59□□□□□ -0.39
SMC4-214ENST00000472991 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
SMC4-214ENST00000472991 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms