RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PBX2P40425 430 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
VAMP3-202ENST00000470357 IDI1Q13907 227 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 NBR1Q14596 966 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 ADGRB3O60242 1522 aa9.4□□□□□ -0.91
VAMP3-202ENST00000470357 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
VAMP3-202ENST00000470357 LRP6O75581 1613 aa9.39□□□□□ -0.91
VAMP3-202ENST00000470357 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
VAMP3-202ENST00000470357 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
VAMP3-202ENST00000470357 PPLO60437 1756 aa9.38□□□□□ -0.91
VAMP3-202ENST00000470357 ANKRD13DQ6ZTN6 518 aa9.38□□□□□ -0.91
VAMP3-202ENST00000470357 NWD1Q149M9 1564 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 KIAA1210Q9ULL0 1709 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 NKTRP30414 1462 aaKnown RBP9.37□□□□□ -0.91
VAMP3-202ENST00000470357 MYOM2P54296 1465 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 OSBPP22059 807 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 PTPREP23469 700 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 PRIM1P49642 420 aaKnown RBP9.37□□□□□ -0.91
VAMP3-202ENST00000470357 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 DCAF11Q8TEB1 546 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 MYO5BQ9ULV0 1848 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 TMEM131LA2VDJ0 1609 aa9.37□□□□□ -0.91
VAMP3-202ENST00000470357 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
VAMP3-202ENST00000470357 COL16A1Q07092 1604 aaPredicted RBP9.36□□□□□ -0.91
VAMP3-202ENST00000470357 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
VAMP3-202ENST00000470357 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
VAMP3-202ENST00000470357 RGL3Q3MIN7 710 aa9.36□□□□□ -0.91
VAMP3-202ENST00000470357 PHLPP1O60346 1717 aa9.36□□□□□ -0.91
VAMP3-202ENST00000470357 MSH6P52701 1360 aa9.36□□□□□ -0.91
VAMP3-202ENST00000470357 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
VAMP3-202ENST00000470357 LAMC1P11047 1609 aa9.35□□□□□ -0.91
VAMP3-202ENST00000470357 C6orf132Q5T0Z8 1188 aa9.35□□□□□ -0.91
VAMP3-202ENST00000470357 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
VAMP3-202ENST00000470357 PRAG1Q86YV5 1406 aa9.35□□□□□ -0.91
VAMP3-202ENST00000470357 MAP3K7O43318 606 aa9.34□□□□□ -0.91
VAMP3-202ENST00000470357 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
VAMP3-202ENST00000470357 ZNF326Q5BKZ1 582 aaKnown RBP9.34□□□□□ -0.91
VAMP3-202ENST00000470357 ZFYVE9O95405 1425 aa9.33□□□□□ -0.92
VAMP3-202ENST00000470357 HDGFP51858 240 aaKnown RBP9.33□□□□□ -0.92
VAMP3-202ENST00000470357 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
VAMP3-202ENST00000470357 NCOA3Q9Y6Q9 1424 aa9.32□□□□□ -0.92
VAMP3-202ENST00000470357 NEXMIFQ5QGS0 1516 aa9.32□□□□□ -0.92
VAMP3-202ENST00000470357 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
VAMP3-202ENST00000470357 COL9A1P20849 921 aa9.32□□□□□ -0.92
VAMP3-202ENST00000470357 RXRBP28702 533 aa9.32□□□□□ -0.92
VAMP3-202ENST00000470357 CDK12Q9NYV4 1490 aaPredicted RBP9.32□□□□□ -0.92
VAMP3-202ENST00000470357 NRXN1Q9ULB1 1477 aa9.32□□□□□ -0.92
VAMP3-202ENST00000470357 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
VAMP3-202ENST00000470357 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
VAMP3-202ENST00000470357 NBPF8Q3BBV2 869 aa9.31□□□□□ -0.92
VAMP3-202ENST00000470357 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
VAMP3-202ENST00000470357 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
VAMP3-202ENST00000470357 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
VAMP3-202ENST00000470357 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
VAMP3-202ENST00000470357 DIP2AQ14689 1571 aa9.3□□□□□ -0.92
VAMP3-202ENST00000470357 ROCK2O75116 1388 aaKnown RBP9.3□□□□□ -0.92
VAMP3-202ENST00000470357 GPRASP1Q5JY77 1395 aa9.3□□□□□ -0.92
VAMP3-202ENST00000470357 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
VAMP3-202ENST00000470357 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
VAMP3-202ENST00000470357 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
VAMP3-202ENST00000470357 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
VAMP3-202ENST00000470357 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
VAMP3-202ENST00000470357 ZBED2Q9BTP6 218 aa9.29□□□□□ -0.92
VAMP3-202ENST00000470357 C19orf44Q9H6X5 657 aa9.29□□□□□ -0.92
VAMP3-202ENST00000470357 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
VAMP3-202ENST00000470357 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
VAMP3-202ENST00000470357 SMYD5Q6GMV2 418 aa9.28□□□□□ -0.92
VAMP3-202ENST00000470357 BRINP3Q76B58 766 aa9.28□□□□□ -0.92
VAMP3-202ENST00000470357 CARD11Q9BXL7 1154 aa9.28□□□□□ -0.92
VAMP3-202ENST00000470357 VPS9D1Q9Y2B5 631 aa9.28□□□□□ -0.92
VAMP3-202ENST00000470357 PIK3C2GO75747 1445 aa9.28□□□□□ -0.92
VAMP3-202ENST00000470357 TK2O00142 265 aa9.27□□□□□ -0.93
VAMP3-202ENST00000470357 BCANQ96GW7 911 aa9.27□□□□□ -0.93
VAMP3-202ENST00000470357 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
VAMP3-202ENST00000470357 RIMS2Q9UQ26 1411 aa9.27□□□□□ -0.93
VAMP3-202ENST00000470357 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.27□□□□□ -0.93
VAMP3-202ENST00000470357 AFF2P51816 1311 aa9.27□□□□□ -0.93
VAMP3-202ENST00000470357 EIF3AQ14152 1382 aaKnown RBP9.26□□□□□ -0.93
VAMP3-202ENST00000470357 USP47Q96K76 1375 aa9.26□□□□□ -0.93
VAMP3-202ENST00000470357 RGS12O14924 1447 aa9.26□□□□□ -0.93
VAMP3-202ENST00000470357 PROX2Q3B8N5 592 aa9.26□□□□□ -0.93
VAMP3-202ENST00000470357 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
VAMP3-202ENST00000470357 ADGRF5Q8IZF2 1346 aa9.26□□□□□ -0.93
VAMP3-202ENST00000470357 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
VAMP3-202ENST00000470357 NUTM2FA1L443 756 aa9.25□□□□□ -0.93
VAMP3-202ENST00000470357 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
VAMP3-202ENST00000470357 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
VAMP3-202ENST00000470357 RBM26Q5T8P6 1007 aaKnown RBP9.25□□□□□ -0.93
VAMP3-202ENST00000470357 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
VAMP3-202ENST00000470357 SLC4A5Q9BY07 1137 aa9.25□□□□□ -0.93
VAMP3-202ENST00000470357 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
VAMP3-202ENST00000470357 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
VAMP3-202ENST00000470357 HSPA5P11021 654 aaKnown RBP9.24□□□□□ -0.93
VAMP3-202ENST00000470357 ATF3P18847 181 aa9.24□□□□□ -0.93
VAMP3-202ENST00000470357 RBM6P78332 1123 aaKnown RBP9.24□□□□□ -0.93
VAMP3-202ENST00000470357 QTRT2Q9H974 415 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms