RNA–Protein interactions for RNA: ENST00000469271.1

NOM1-203, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 1,209 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-203ENST00000469271 GGNBP2Q9H3C7 697 aa28.23■■■□□ 2.11
NOM1-203ENST00000469271 SPATA31A1Q5TZJ5 1347 aa28.21■■■□□ 2.11
NOM1-203ENST00000469271 ONECUT3O60422 494 aaPredicted RBP28.21■■■□□ 2.11
NOM1-203ENST00000469271 ZEB1P37275 1124 aaPredicted RBP28.21■■■□□ 2.11
NOM1-203ENST00000469271 COL18A1P39060 1754 aa28.21■■■□□ 2.11
NOM1-203ENST00000469271 LARP1Q6PKG0 1096 aaKnown RBP28.19■■■□□ 2.1
NOM1-203ENST00000469271 AXIN2Q9Y2T1 843 aa28.19■■■□□ 2.1
NOM1-203ENST00000469271 CCDC7Q96M83 1385 aa28.19■■■□□ 2.1
NOM1-203ENST00000469271 CRB1P82279 1406 aa28.18■■■□□ 2.1
NOM1-203ENST00000469271 LTN1O94822 1766 aa28.16■■■□□ 2.1
NOM1-203ENST00000469271 FAM98CQ17RN3 349 aaKnown RBP28.16■■■□□ 2.1
NOM1-203ENST00000469271 SEPT12Q8IYM1 358 aa28.16■■■□□ 2.1
NOM1-203ENST00000469271 THRAP3Q9Y2W1 955 aaKnown RBP28.16■■■□□ 2.1
NOM1-203ENST00000469271 WDR17Q8IZU2 1322 aa28.16■■■□□ 2.1
NOM1-203ENST00000469271 NSD2O96028 1365 aa28.15■■■□□ 2.1
NOM1-203ENST00000469271 KNSTRNQ9Y448 316 aa28.15■■■□□ 2.1
NOM1-203ENST00000469271 BLMP54132 1417 aaPredicted RBP28.15■■■□□ 2.1
NOM1-203ENST00000469271 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
NOM1-203ENST00000469271 A0A0G2JS52 829 aa28.14■■■□□ 2.1
NOM1-203ENST00000469271 MYT1Q01538 1121 aa28.14■■■□□ 2.1
NOM1-203ENST00000469271 BARGINQ6ZT62 677 aa28.14■■■□□ 2.1
NOM1-203ENST00000469271 TCP11L2Q8N4U5 519 aa28.14■■■□□ 2.1
NOM1-203ENST00000469271 CSB-PGBD3P0DP91 1061 aa28.13■■■□□ 2.09
NOM1-203ENST00000469271 TOM1L2Q6ZVM7 507 aa28.13■■■□□ 2.09
NOM1-203ENST00000469271 IP6K1Q92551 441 aa28.13■■■□□ 2.09
NOM1-203ENST00000469271 USP35Q9P2H5 1018 aa28.13■■■□□ 2.09
NOM1-203ENST00000469271 RTL1A6NKG5 1358 aa28.12■■■□□ 2.09
NOM1-203ENST00000469271 MAP3K19Q56UN5 1328 aa28.12■■■□□ 2.09
NOM1-203ENST00000469271 AMPHP49418 695 aa28.11■■■□□ 2.09
NOM1-203ENST00000469271 ERBB3P21860 1342 aa28.1■■■□□ 2.09
NOM1-203ENST00000469271 KIF24Q5T7B8 1368 aa28.1■■■□□ 2.09
NOM1-203ENST00000469271 RGPD5Q99666 1765 aa28.08■■■□□ 2.09
NOM1-203ENST00000469271 THSD7AQ9UPZ6 1657 aa28.07■■■□□ 2.08
NOM1-203ENST00000469271 HOXC9P31274 260 aa28.07■■■□□ 2.08
NOM1-203ENST00000469271 RRS1Q15050 365 aaKnown RBP28.07■■■□□ 2.08
NOM1-203ENST00000469271 CARD10Q9BWT7 1032 aa28.07■■■□□ 2.08
NOM1-203ENST00000469271 ANKRD26Q9UPS8 1709 aa28.06■■■□□ 2.08
NOM1-203ENST00000469271 FBLN1P23142 703 aa28.06■■■□□ 2.08
NOM1-203ENST00000469271 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
NOM1-203ENST00000469271 ANKRD24Q8TF21 1146 aa28.06■■■□□ 2.08
NOM1-203ENST00000469271 CDCA7Q9BWT1 371 aaPredicted RBP28.04■■■□□ 2.08
NOM1-203ENST00000469271 FLT4P35916 1363 aa28.03■■■□□ 2.08
NOM1-203ENST00000469271 NLRP2Q9NX02 1062 aa28.02■■■□□ 2.08
NOM1-203ENST00000469271 AMER1Q5JTC6 1135 aaPredicted RBP28.01■■■□□ 2.07
NOM1-203ENST00000469271 BRWD3Q6RI45 1802 aa28.01■■■□□ 2.07
NOM1-203ENST00000469271 SMG6Q86US8 1419 aaKnown RBP28.01■■■□□ 2.07
NOM1-203ENST00000469271 PER1O15534 1290 aaPredicted RBP28■■■□□ 2.07
NOM1-203ENST00000469271 MORC1Q86VD1 984 aa28■■■□□ 2.07
NOM1-203ENST00000469271 UPF1Q92900 1129 aaKnown RBP eCLIP28■■■□□ 2.07
NOM1-203ENST00000469271 FAM208AQ9UK61 1670 aaKnown RBP28■■■□□ 2.07
NOM1-203ENST00000469271 EP400Q96L91 3159 aa27.99■■■□□ 2.07
NOM1-203ENST00000469271 INSRP06213 1382 aa27.99■■■□□ 2.07
NOM1-203ENST00000469271 PDE3BQ13370 1112 aa27.97■■■□□ 2.07
NOM1-203ENST00000469271 LTV1Q96GA3 475 aaPredicted RBP27.97■■■□□ 2.07
NOM1-203ENST00000469271 EMILIN1Q9Y6C2 1016 aa27.97■■■□□ 2.07
NOM1-203ENST00000469271 PARP4Q9UKK3 1724 aaKnown RBP27.96■■■□□ 2.07
NOM1-203ENST00000469271 TNNT2P45379 298 aaPredicted RBP27.96■■■□□ 2.07
NOM1-203ENST00000469271 NPC1L1Q9UHC9 1359 aa27.96■■■□□ 2.07
NOM1-203ENST00000469271 PPM1GO15355 546 aaPredicted RBP27.95■■■□□ 2.06
NOM1-203ENST00000469271 CCDC125Q86Z20 511 aa27.95■■■□□ 2.06
NOM1-203ENST00000469271 POLKQ9UBT6 870 aa27.95■■■□□ 2.06
NOM1-203ENST00000469271 HSP90AB2PQ58FF8 381 aa27.94■■■□□ 2.06
NOM1-203ENST00000469271 PEAK1Q9H792 1746 aa27.94■■■□□ 2.06
NOM1-203ENST00000469271 DDB1Q16531 1140 aa27.93■■■□□ 2.06
NOM1-203ENST00000469271 DISP2A7MBM2 1401 aa27.92■■■□□ 2.06
NOM1-203ENST00000469271 WNK3Q9BYP7 1800 aa27.92■■■□□ 2.06
NOM1-203ENST00000469271 MAP2P11137 1827 aaKnown RBP27.92■■■□□ 2.06
NOM1-203ENST00000469271 IL2RBP14784 551 aa27.9■■■□□ 2.06
NOM1-203ENST00000469271 CC2D1BQ5T0F9 858 aaKnown RBP27.89■■■□□ 2.06
NOM1-203ENST00000469271 FAM196AQ6ZSG2 479 aa27.89■■■□□ 2.06
NOM1-203ENST00000469271 LRRC37A3O60309 1634 aa27.89■■■□□ 2.05
NOM1-203ENST00000469271 EXOC5O00471 708 aa27.87■■■□□ 2.05
NOM1-203ENST00000469271 TNS2Q63HR2 1409 aa27.84■■■□□ 2.05
NOM1-203ENST00000469271 SF3B2Q13435 895 aaKnown RBP27.84■■■□□ 2.05
NOM1-203ENST00000469271 NBPF6Q5VWK0 638 aa27.84■■■□□ 2.05
NOM1-203ENST00000469271 NBPF4Q96M43 638 aa27.84■■■□□ 2.05
NOM1-203ENST00000469271 FAM182BQ5T319 152 aa27.83■■■□□ 2.05
NOM1-203ENST00000469271 OVOS2A0A0G2JMS6 1433 aa27.83■■■□□ 2.05
NOM1-203ENST00000469271 RAPGEF4Q8WZA2 1011 aa27.79■■■□□ 2.04
NOM1-203ENST00000469271 RGPD2P0DJD1 1756 aa27.78■■■□□ 2.04
NOM1-203ENST00000469271 BCL9O00512 1426 aa27.78■■■□□ 2.04
NOM1-203ENST00000469271 EIF4A2Q14240 407 aaKnown RBP27.77■■■□□ 2.04
NOM1-203ENST00000469271 MARCH10Q8NA82 808 aaPredicted RBP27.77■■■□□ 2.04
NOM1-203ENST00000469271 USHBP1Q8N6Y0 703 aa27.76■■■□□ 2.03
NOM1-203ENST00000469271 NCAPD2Q15021 1401 aa27.75■■■□□ 2.03
NOM1-203ENST00000469271 RGPD1P0DJD0 1748 aa27.75■■■□□ 2.03
NOM1-203ENST00000469271 MTHFSP49914 203 aa27.75■■■□□ 2.03
NOM1-203ENST00000469271 MEGF6O75095 1541 aa27.74■■■□□ 2.03
NOM1-203ENST00000469271 TATP17735 454 aaPredicted RBP27.74■■■□□ 2.03
NOM1-203ENST00000469271 CNGB1Q14028 1251 aaPredicted RBP27.74■■■□□ 2.03
NOM1-203ENST00000469271 EYA1Q99502 592 aa27.74■■■□□ 2.03
NOM1-203ENST00000469271 TRIM37O94972 964 aa27.72■■■□□ 2.03
NOM1-203ENST00000469271 BAG6P46379 1132 aa27.72■■■□□ 2.03
NOM1-203ENST00000469271 ZCRB1Q8TBF4 217 aaKnown RBP27.72■■■□□ 2.03
NOM1-203ENST00000469271 PLEKHG2Q9H7P9 1386 aa27.71■■■□□ 2.03
NOM1-203ENST00000469271 IGSF1Q8N6C5 1336 aa27.7■■■□□ 2.03
NOM1-203ENST00000469271 DDX10Q13206 875 aaKnown RBP27.69■■■□□ 2.02
NOM1-203ENST00000469271 DDX54Q8TDD1 881 aaKnown RBP27.67■■■□□ 2.02
NOM1-203ENST00000469271 IL13P35225 146 aa27.66■■■□□ 2.02
NOM1-203ENST00000469271 TNS1Q9HBL0 1735 aaKnown RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms