RNA–Protein interactions for RNA: ENST00000469271.1

NOM1-203, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 1,209 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-203ENST00000469271 NISCHQ9Y2I1 1504 aa49.6■■■■■ 5.53
NOM1-203ENST00000469271 CCDC180Q9P1Z9 1646 aa44.09■■■■■ 4.65
NOM1-203ENST00000469271 ABCC9O60706 1549 aa43.01■■■■■ 4.48
NOM1-203ENST00000469271 RB1CC1Q8TDY2 1594 aa41.48■■■■■ 4.23
NOM1-203ENST00000469271 NACADO15069 1562 aa41.46■■■■■ 4.23
NOM1-203ENST00000469271 DCAF8L2P0C7V8 631 aa41.38■■■■■ 4.21
NOM1-203ENST00000469271 ZCCHC6Q5VYS8 1495 aaKnown RBP41.33■■■■■ 4.21
NOM1-203ENST00000469271 MYO15BQ96JP2 1530 aa41.28■■■■■ 4.2
NOM1-203ENST00000469271 DCAF1Q9Y4B6 1507 aa41.1■■■■■ 4.17
NOM1-203ENST00000469271 UNC13AQ9UPW8 1703 aa40.42■■■■■ 4.06
NOM1-203ENST00000469271 PABPN1Q86U42 306 aaKnown RBP eCLIP40.19■■■■■ 4.02
NOM1-203ENST00000469271 SCRIBQ14160 1630 aa40.16■■■■■ 4.02
NOM1-203ENST00000469271 BICRAQ9NZM4 1560 aa40.14■■■■■ 4.02
NOM1-203ENST00000469271 SHROOM4Q9ULL8 1493 aa39.89■■■■□ 3.98
NOM1-203ENST00000469271 DNAJC5BQ9UF47 199 aa39.36■■■■□ 3.89
NOM1-203ENST00000469271 EIF4G1Q04637 1599 aaKnown RBP39.12■■■■□ 3.85
NOM1-203ENST00000469271 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
NOM1-203ENST00000469271 CECR2Q9BXF3 1484 aa38.69■■■■□ 3.78
NOM1-203ENST00000469271 BAZ1AQ9NRL2 1556 aaPredicted RBP38.47■■■■□ 3.75
NOM1-203ENST00000469271 SMARCA4P51532 1647 aa38.46■■■■□ 3.75
NOM1-203ENST00000469271 SMARCA2P51531 1590 aa38.26■■■■□ 3.72
NOM1-203ENST00000469271 NCAPD3P42695 1498 aa38.25■■■■□ 3.71
NOM1-203ENST00000469271 ATAD2BQ9ULI0 1458 aa38.25■■■■□ 3.71
NOM1-203ENST00000469271 MROH2BQ7Z745 1585 aa38.17■■■■□ 3.7
NOM1-203ENST00000469271 PEG3Q9GZU2 1588 aa38.12■■■■□ 3.69
NOM1-203ENST00000469271 HMGXB3Q12766 1538 aa38.07■■■■□ 3.69
NOM1-203ENST00000469271 BAZ1BQ9UIG0 1483 aaKnown RBP37.96■■■■□ 3.67
NOM1-203ENST00000469271 RSF1Q96T23 1441 aaPredicted RBP37.79■■■■□ 3.64
NOM1-203ENST00000469271 WIZO95785 1651 aa37.75■■■■□ 3.63
NOM1-203ENST00000469271 TOP2AP11388 1531 aaKnown RBP37.42■■■■□ 3.58
NOM1-203ENST00000469271 LAMC3Q9Y6N6 1575 aa37.23■■■■□ 3.55
NOM1-203ENST00000469271 NESP48681 1621 aa37.21■■■■□ 3.55
NOM1-203ENST00000469271 ERCC6Q03468 1493 aa37.14■■■■□ 3.54
NOM1-203ENST00000469271 CADPSQ9ULU8 1353 aa37.14■■■■□ 3.54
NOM1-203ENST00000469271 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
NOM1-203ENST00000469271 CCDC88BA6NC98 1476 aa36.95■■■■□ 3.51
NOM1-203ENST00000469271 CFTRP13569 1480 aa36.92■■■■□ 3.5
NOM1-203ENST00000469271 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
NOM1-203ENST00000469271 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
NOM1-203ENST00000469271 CUX2O14529 1486 aa36.75■■■■□ 3.47
NOM1-203ENST00000469271 FANCD2Q9BXW9 1451 aa36.69■■■■□ 3.46
NOM1-203ENST00000469271 THOC2Q8NI27 1593 aaKnown RBP36.67■■■■□ 3.46
NOM1-203ENST00000469271 CEP164Q9UPV0 1460 aa36.66■■■■□ 3.46
NOM1-203ENST00000469271 PRDM2Q13029 1718 aa36.61■■■■□ 3.45
NOM1-203ENST00000469271 MRC2Q9UBG0 1479 aa36.58■■■■□ 3.45
NOM1-203ENST00000469271 WDR62O43379 1518 aa36.46■■■■□ 3.43
NOM1-203ENST00000469271 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
NOM1-203ENST00000469271 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
NOM1-203ENST00000469271 TOPBP1Q92547 1522 aa36.09■■■■□ 3.37
NOM1-203ENST00000469271 DNMBPQ6XZF7 1577 aa36.08■■■■□ 3.37
NOM1-203ENST00000469271 IFT140Q96RY7 1462 aa35.9■■■■□ 3.34
NOM1-203ENST00000469271 CUX1P39880 1505 aa35.83■■■■□ 3.33
NOM1-203ENST00000469271 POLA1P09884 1462 aaPredicted RBP35.8■■■■□ 3.32
NOM1-203ENST00000469271 FGD5Q6ZNL6 1462 aa35.71■■■■□ 3.31
NOM1-203ENST00000469271 TARBP1Q13395 1621 aaKnown RBP35.68■■■■□ 3.3
NOM1-203ENST00000469271 SOGA1O94964 1423 aa35.66■■■■□ 3.3
NOM1-203ENST00000469271 WRNQ14191 1432 aaPredicted RBP eCLIP35.66■■■■□ 3.3
NOM1-203ENST00000469271 ZNF608Q9ULD9 1512 aaPredicted RBP35.64■■■■□ 3.3
NOM1-203ENST00000469271 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
NOM1-203ENST00000469271 TOP2BQ02880 1626 aa35.57■■■■□ 3.28
NOM1-203ENST00000469271 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
NOM1-203ENST00000469271 EIF4G3O43432 1585 aaKnown RBP35.54■■■■□ 3.28
NOM1-203ENST00000469271 WDR97A6NE52 1622 aa35.51■■■■□ 3.28
NOM1-203ENST00000469271 DNAJC5Q9H3Z4 198 aa35.51■■■■□ 3.28
NOM1-203ENST00000469271 SYNJ1O43426 1573 aa35.51■■■■□ 3.27
NOM1-203ENST00000469271 AQRO60306 1485 aaKnown RBP eCLIP35.47■■■■□ 3.274e-7■■■■■ 28.6
NOM1-203ENST00000469271 TDRD9Q8NDG6 1382 aaKnown RBP35.42■■■■□ 3.26
NOM1-203ENST00000469271 ABCA10Q8WWZ4 1543 aa35.41■■■■□ 3.26
NOM1-203ENST00000469271 GAPVD1Q14C86 1478 aa35.27■■■■□ 3.24
NOM1-203ENST00000469271 GRIN2BQ13224 1484 aa35.26■■■■□ 3.23
NOM1-203ENST00000469271 OSCARQ8IYS5 282 aa35.23■■■■□ 3.23
NOM1-203ENST00000469271 ABCA5Q8WWZ7 1642 aa35.22■■■■□ 3.23
NOM1-203ENST00000469271 MAGI1Q96QZ7 1491 aaPredicted RBP35.18■■■■□ 3.22
NOM1-203ENST00000469271 SNAPC4Q5SXM2 1469 aa35.16■■■■□ 3.22
NOM1-203ENST00000469271 PBRM1Q86U86 1689 aa35.13■■■■□ 3.21
NOM1-203ENST00000469271 FBLN2P98095 1184 aa35.06■■■■□ 3.2
NOM1-203ENST00000469271 CHD1O14646 1710 aa35.03■■■■□ 3.2
NOM1-203ENST00000469271 SYNJ2O15056 1496 aa35.03■■■■□ 3.2
NOM1-203ENST00000469271 CHMP7Q8WUX9 453 aaPredicted RBP35.02■■■■□ 3.2
NOM1-203ENST00000469271 ERICH3Q5RHP9 1530 aa35■■■■□ 3.19
NOM1-203ENST00000469271 KIF27Q86VH2 1401 aa34.95■■■■□ 3.19
NOM1-203ENST00000469271 ADAMTS12P58397 1594 aa34.89■■■■□ 3.18
NOM1-203ENST00000469271 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
NOM1-203ENST00000469271 FHAD1B1AJZ9 1412 aa34.88■■■■□ 3.17
NOM1-203ENST00000469271 GRIN2AQ12879 1464 aa34.79■■■■□ 3.16
NOM1-203ENST00000469271 IGF1RP08069 1367 aa34.75■■■■□ 3.15
NOM1-203ENST00000469271 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
NOM1-203ENST00000469271 CUL7Q14999 1698 aa34.69■■■■□ 3.14
NOM1-203ENST00000469271 NUP160Q12769 1436 aa34.64■■■■□ 3.14
NOM1-203ENST00000469271 ARHGEF11O15085 1522 aa34.61■■■■□ 3.13
NOM1-203ENST00000469271 RIMBP3CA6NJZ7 1639 aa34.58■■■■□ 3.13
NOM1-203ENST00000469271 RIMBP3BA6NNM3 1639 aa34.58■■■■□ 3.13
NOM1-203ENST00000469271 RIMBP3Q9UFD9 1639 aa34.58■■■■□ 3.13
NOM1-203ENST00000469271 CARMIL1Q5VZK9 1371 aa34.57■■■■□ 3.12
NOM1-203ENST00000469271 CEP170Q5SW79 1584 aa34.57■■■■□ 3.12
NOM1-203ENST00000469271 RUSC2Q8N2Y8 1516 aa34.5■■■■□ 3.11
NOM1-203ENST00000469271 CHIC1Q5VXU3 224 aa34.43■■■■□ 3.1
NOM1-203ENST00000469271 RAPGEF2Q9Y4G8 1499 aa34.38■■■■□ 3.09
NOM1-203ENST00000469271 EEA1Q15075 1411 aa34.35■■■■□ 3.09
NOM1-203ENST00000469271 KIAA0586Q9BVV6 1533 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms