RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 NOP58Q9Y2X3 529 aaKnown RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 NEXMIFQ5QGS0 1516 aa7.81□□□□□ -1.16
SHQ1-205ENST00000468371 LAS1LQ9Y4W2 734 aaKnown RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 MPRIPQ6WCQ1 1025 aa7.81□□□□□ -1.16
SHQ1-205ENST00000468371 ZCRB1Q8TBF4 217 aaKnown RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 THRAP3Q9Y2W1 955 aaKnown RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 ASXL1Q8IXJ9 1541 aa7.8□□□□□ -1.16
SHQ1-205ENST00000468371 UPF1Q92900 1129 aaKnown RBP eCLIP7.8□□□□□ -1.16
SHQ1-205ENST00000468371 TFCP2L1Q9NZI6 479 aa7.8□□□□□ -1.16
SHQ1-205ENST00000468371 TEFQ10587 303 aa7.8□□□□□ -1.16
SHQ1-205ENST00000468371 TTC5Q8N0Z6 440 aa7.8□□□□□ -1.16
SHQ1-205ENST00000468371 BRD4O60885 1362 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-205ENST00000468371 CCER2I3L3R5 266 aa7.8□□□□□ -1.16
SHQ1-205ENST00000468371 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
SHQ1-205ENST00000468371 HSP90AB1P08238 724 aaKnown RBP7.79□□□□□ -1.16
SHQ1-205ENST00000468371 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-205ENST00000468371 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
SHQ1-205ENST00000468371 NINLQ9Y2I6 1382 aa7.79□□□□□ -1.16
SHQ1-205ENST00000468371 USHBP1Q8N6Y0 703 aa7.79□□□□□ -1.16
SHQ1-205ENST00000468371 R3HDM1Q15032 1099 aaKnown RBP7.78□□□□□ -1.16
SHQ1-205ENST00000468371 TMOD3Q9NYL9 352 aa7.78□□□□□ -1.16
SHQ1-205ENST00000468371 PHLPP1O60346 1717 aa7.78□□□□□ -1.16
SHQ1-205ENST00000468371 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
SHQ1-205ENST00000468371 CABP4P57796 275 aa7.78□□□□□ -1.16
SHQ1-205ENST00000468371 PUS7Q96PZ0 661 aaKnown RBP7.78□□□□□ -1.16
SHQ1-205ENST00000468371 AK7Q96M32 723 aa7.78□□□□□ -1.16
SHQ1-205ENST00000468371 CARD10Q9BWT7 1032 aa7.78□□□□□ -1.16
SHQ1-205ENST00000468371 ROBO1Q9Y6N7 1651 aa7.78□□□□□ -1.16
SHQ1-205ENST00000468371 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
SHQ1-205ENST00000468371 IP6K1Q92551 441 aa7.77□□□□□ -1.17
SHQ1-205ENST00000468371 TMX4Q9H1E5 349 aaPredicted RBP7.77□□□□□ -1.17
SHQ1-205ENST00000468371 DIAPH1O60610 1272 aaKnown RBP7.77□□□□□ -1.17
SHQ1-205ENST00000468371 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
SHQ1-205ENST00000468371 MTHFSP49914 203 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 ARHGEF25Q86VW2 580 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 WDR17Q8IZU2 1322 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 TECPR2O15040 1411 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 RGS17Q9UGC6 210 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-205ENST00000468371 SPATA31A5Q5VU36 1347 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 SPATA31A7Q8IWB4 1347 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 MED1Q15648 1581 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-205ENST00000468371 SPON1Q9HCB6 807 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 CCDC7Q96M83 1385 aa7.76□□□□□ -1.17
SHQ1-205ENST00000468371 NEUROD2Q15784 382 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 KDM5AP29375 1690 aaKnown RBP7.75□□□□□ -1.17
SHQ1-205ENST00000468371 SPATA31A1Q5TZJ5 1347 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 GPR162Q16538 588 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 FBLN1P23142 703 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 SULT6B1Q6IMI4 303 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 IFNL2Q8IZJ0 200 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 CCNL1Q9UK58 526 aaPredicted RBP7.75□□□□□ -1.17
SHQ1-205ENST00000468371 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
SHQ1-205ENST00000468371 PRIM1P49642 420 aaKnown RBP7.74□□□□□ -1.17
SHQ1-205ENST00000468371 HSP90AB2PQ58FF8 381 aa7.74□□□□□ -1.17
SHQ1-205ENST00000468371 POLR3AO14802 1390 aaPredicted RBP7.74□□□□□ -1.17
SHQ1-205ENST00000468371 FYB1O15117 783 aa7.74□□□□□ -1.17
SHQ1-205ENST00000468371 HMOX1P09601 288 aa7.74□□□□□ -1.17
SHQ1-205ENST00000468371 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.74□□□□□ -1.17
SHQ1-205ENST00000468371 MAP3K19Q56UN5 1328 aa7.74□□□□□ -1.17
SHQ1-205ENST00000468371 ATF5Q9Y2D1 282 aaPredicted RBP7.74□□□□□ -1.17
SHQ1-205ENST00000468371 NSD3Q9BZ95 1437 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.73□□□□□ -1.17
SHQ1-205ENST00000468371 TULP4Q9NRJ4 1543 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 PHF14O94880 888 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 HOXC9P31274 260 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 AMOTQ4VCS5 1084 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 USP6P35125 1406 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 MYO5BQ9ULV0 1848 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 PTCD1O75127 700 aaKnown RBP7.73□□□□□ -1.17
SHQ1-205ENST00000468371 BARGINQ6ZT62 677 aa7.73□□□□□ -1.17
SHQ1-205ENST00000468371 EZH2Q15910 746 aaKnown RBP7.73□□□□□ -1.17
SHQ1-205ENST00000468371 EDC4Q6P2E9 1401 aaKnown RBP7.72□□□□□ -1.17
SHQ1-205ENST00000468371 ANKRD36BQ8N2N9 1353 aa7.72□□□□□ -1.17
SHQ1-205ENST00000468371 AATKQ6ZMQ8 1374 aa7.72□□□□□ -1.17
SHQ1-205ENST00000468371 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.17
SHQ1-205ENST00000468371 A0A1W2PP64 1363 aa7.71□□□□□ -1.17
SHQ1-205ENST00000468371 WASHC2AQ641Q2 1341 aa7.71□□□□□ -1.17
SHQ1-205ENST00000468371 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 ATP7BP35670 1465 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 ZPR1O75312 459 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 ZBTB7AO95365 584 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 RFC4P35249 363 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 GAS2L2Q8NHY3 880 aa7.71□□□□□ -1.18
SHQ1-205ENST00000468371 CHD2O14647 1828 aaKnown RBP7.71□□□□□ -1.18
SHQ1-205ENST00000468371 FLT4P35916 1363 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 DLC1Q96QB1 1528 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 ATP6V1AP38606 617 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 CRB1P82279 1406 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 CDC42BPGQ6DT37 1551 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 NWD1Q149M9 1564 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 FLAD1Q8NFF5 587 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 BLMP54132 1417 aaPredicted RBP7.7□□□□□ -1.18
SHQ1-205ENST00000468371 TXNRD1Q16881 649 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 LAMC1P11047 1609 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 ERBB3P21860 1342 aa7.7□□□□□ -1.18
SHQ1-205ENST00000468371 AXIN2Q9Y2T1 843 aa7.69□□□□□ -1.18
SHQ1-205ENST00000468371 SSH2Q76I76 1423 aa7.69□□□□□ -1.18
SHQ1-205ENST00000468371 RALGAPBQ86X10 1494 aa7.69□□□□□ -1.18
SHQ1-205ENST00000468371 CANXP27824 592 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms