RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 TIMELESSQ9UNS1 1208 aa14.65□□□□□ -0.06
SSR3-205ENST00000467789 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
SSR3-205ENST00000467789 MON2Q7Z3U7 1717 aa14.64□□□□□ -0.07
SSR3-205ENST00000467789 KTN1Q86UP2 1357 aaKnown RBP14.64□□□□□ -0.07
SSR3-205ENST00000467789 KCNH5Q8NCM2 988 aa14.64□□□□□ -0.07
SSR3-205ENST00000467789 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
SSR3-205ENST00000467789 TTC21BQ7Z4L5 1316 aa14.64□□□□□ -0.07
SSR3-205ENST00000467789 AATKQ6ZMQ8 1374 aa14.63□□□□□ -0.07
SSR3-205ENST00000467789 BARGINQ6ZT62 677 aa14.63□□□□□ -0.07
SSR3-205ENST00000467789 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
SSR3-205ENST00000467789 NINLQ9Y2I6 1382 aa14.61□□□□□ -0.07
SSR3-205ENST00000467789 COL5A2P05997 1499 aaPredicted RBP14.61□□□□□ -0.07
SSR3-205ENST00000467789 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
SSR3-205ENST00000467789 TCP11L2Q8N4U5 519 aa14.6□□□□□ -0.07
SSR3-205ENST00000467789 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
SSR3-205ENST00000467789 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
SSR3-205ENST00000467789 USP54Q70EL1 1684 aa14.6□□□□□ -0.07
SSR3-205ENST00000467789 RGPD1P0DJD0 1748 aa14.6□□□□□ -0.07
SSR3-205ENST00000467789 CRB1P82279 1406 aa14.59□□□□□ -0.07
SSR3-205ENST00000467789 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
SSR3-205ENST00000467789 ABCC6O95255 1503 aa14.59□□□□□ -0.07
SSR3-205ENST00000467789 USP31Q70CQ4 1352 aa14.59□□□□□ -0.07
SSR3-205ENST00000467789 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.07
SSR3-205ENST00000467789 CD163L1Q9NR16 1453 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 COL18A1P39060 1754 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 FKBP8Q14318 412 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 LARP1Q6PKG0 1096 aaKnown RBP14.58□□□□□ -0.08
SSR3-205ENST00000467789 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 TMC1Q8TDI8 760 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 TESK2Q96S53 571 aa14.58□□□□□ -0.08
SSR3-205ENST00000467789 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
SSR3-205ENST00000467789 BAG6P46379 1132 aa14.57□□□□□ -0.08
SSR3-205ENST00000467789 FAM196AQ6ZSG2 479 aa14.57□□□□□ -0.08
SSR3-205ENST00000467789 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
SSR3-205ENST00000467789 PARP4Q9UKK3 1724 aaKnown RBP14.56□□□□□ -0.08
SSR3-205ENST00000467789 SLC12A5Q9H2X9 1139 aa14.56□□□□□ -0.08
SSR3-205ENST00000467789 NFAT5O94916 1531 aa14.56□□□□□ -0.08
SSR3-205ENST00000467789 PDE3BQ13370 1112 aa14.55□□□□□ -0.08
SSR3-205ENST00000467789 WDR17Q8IZU2 1322 aa14.55□□□□□ -0.08
SSR3-205ENST00000467789 DISP2A7MBM2 1401 aa14.55□□□□□ -0.08
SSR3-205ENST00000467789 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
SSR3-205ENST00000467789 TMF1P82094 1093 aa14.54□□□□□ -0.08
SSR3-205ENST00000467789 DEFB132Q7Z7B7 95 aa14.54□□□□□ -0.08
SSR3-205ENST00000467789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.54□□□□□ -0.082e-6■□□□□ 9
SSR3-205ENST00000467789 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
SSR3-205ENST00000467789 A0A1W2PP64 1363 aa14.54□□□□□ -0.08
SSR3-205ENST00000467789 USP47Q96K76 1375 aa14.54□□□□□ -0.08
SSR3-205ENST00000467789 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
SSR3-205ENST00000467789 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
SSR3-205ENST00000467789 TNS1Q9HBL0 1735 aaKnown RBP14.52□□□□□ -0.08
SSR3-205ENST00000467789 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.09
SSR3-205ENST00000467789 RGPD5Q99666 1765 aa14.52□□□□□ -0.09
SSR3-205ENST00000467789 WNK3Q9BYP7 1800 aa14.51□□□□□ -0.09
SSR3-205ENST00000467789 FAM182BQ5T319 152 aa14.51□□□□□ -0.09
SSR3-205ENST00000467789 NME9Q86XW9 330 aa14.51□□□□□ -0.09
SSR3-205ENST00000467789 CARD10Q9BWT7 1032 aa14.51□□□□□ -0.09
SSR3-205ENST00000467789 PCGF6Q9BYE7 350 aa14.51□□□□□ -0.09
SSR3-205ENST00000467789 LTN1O94822 1766 aa14.5□□□□□ -0.09
SSR3-205ENST00000467789 ANKRD36BQ8N2N9 1353 aa14.5□□□□□ -0.09
SSR3-205ENST00000467789 PARD3Q8TEW0 1356 aa14.5□□□□□ -0.09
SSR3-205ENST00000467789 SOX12O15370 315 aa14.5□□□□□ -0.09
SSR3-205ENST00000467789 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
SSR3-205ENST00000467789 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
SSR3-205ENST00000467789 CCDC7Q96M83 1385 aa14.49□□□□□ -0.09
SSR3-205ENST00000467789 CSB-PGBD3P0DP91 1061 aa14.49□□□□□ -0.09
SSR3-205ENST00000467789 DDB1Q16531 1140 aa14.49□□□□□ -0.09
SSR3-205ENST00000467789 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
SSR3-205ENST00000467789 LRRC37A3O60309 1634 aa14.48□□□□□ -0.09
SSR3-205ENST00000467789 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
SSR3-205ENST00000467789 TRIM37O94972 964 aa14.47□□□□□ -0.09
SSR3-205ENST00000467789 EN1Q05925 392 aaPredicted RBP14.47□□□□□ -0.09
SSR3-205ENST00000467789 PEAK1Q9H792 1746 aa14.46□□□□□ -0.09
SSR3-205ENST00000467789 ERBB3P21860 1342 aa14.46□□□□□ -0.09
SSR3-205ENST00000467789 COG3Q96JB2 828 aa14.46□□□□□ -0.09
SSR3-205ENST00000467789 BCL9O00512 1426 aa14.46□□□□□ -0.09
SSR3-205ENST00000467789 SRCAPQ6ZRS2 3230 aa14.46□□□□□ -0.09
SSR3-205ENST00000467789 APBA3O96018 575 aa14.45□□□□□ -0.1
SSR3-205ENST00000467789 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
SSR3-205ENST00000467789 FAM208AQ9UK61 1670 aaKnown RBP14.45□□□□□ -0.1
SSR3-205ENST00000467789 CAMKK2Q96RR4 588 aa14.44□□□□□ -0.1
SSR3-205ENST00000467789 RGPD3A6NKT7 1758 aaPredicted RBP14.44□□□□□ -0.1
SSR3-205ENST00000467789 RGPD4Q7Z3J3 1758 aa14.44□□□□□ -0.1
SSR3-205ENST00000467789 SBF2Q86WG5 1849 aa14.43□□□□□ -0.1
SSR3-205ENST00000467789 EXOC5O00471 708 aa14.43□□□□□ -0.1
SSR3-205ENST00000467789 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
SSR3-205ENST00000467789 IP6K1Q92551 441 aa14.43□□□□□ -0.1
SSR3-205ENST00000467789 EZH2Q15910 746 aaKnown RBP14.42□□□□□ -0.1
SSR3-205ENST00000467789 ANKRD24Q8TF21 1146 aa14.42□□□□□ -0.1
SSR3-205ENST00000467789 RREB1Q92766 1687 aa14.42□□□□□ -0.1
SSR3-205ENST00000467789 TNS2Q63HR2 1409 aa14.41□□□□□ -0.1
SSR3-205ENST00000467789 NLRP2Q9NX02 1062 aa14.41□□□□□ -0.1
SSR3-205ENST00000467789 RTL1A6NKG5 1358 aa14.41□□□□□ -0.1
SSR3-205ENST00000467789 LRP5O75197 1615 aa14.41□□□□□ -0.1
SSR3-205ENST00000467789 MYOM1P52179 1685 aa14.4□□□□□ -0.1
SSR3-205ENST00000467789 FYB1O15117 783 aa14.4□□□□□ -0.1
SSR3-205ENST00000467789 PLSCR1O15162 318 aa14.4□□□□□ -0.1
SSR3-205ENST00000467789 IL2RBP14784 551 aa14.4□□□□□ -0.1
SSR3-205ENST00000467789 MARCH10Q8NA82 808 aaPredicted RBP14.4□□□□□ -0.1
SSR3-205ENST00000467789 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms