RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SBF2Q86WG5 1849 aa17.76■□□□□ 0.43
UBR4-211ENST00000467272 PIK3C2AO00443 1686 aa17.76■□□□□ 0.43
UBR4-211ENST00000467272 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
UBR4-211ENST00000467272 NLRP6P59044 892 aa17.74■□□□□ 0.43
UBR4-211ENST00000467272 DDB1Q16531 1140 aa17.74■□□□□ 0.43
UBR4-211ENST00000467272 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
UBR4-211ENST00000467272 PDGFDQ9GZP0 370 aaPredicted RBP17.74■□□□□ 0.43
UBR4-211ENST00000467272 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
UBR4-211ENST00000467272 PTGER2P43116 358 aa17.73■□□□□ 0.43
UBR4-211ENST00000467272 CDCA7Q9BWT1 371 aaPredicted RBP17.72■□□□□ 0.43
UBR4-211ENST00000467272 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
UBR4-211ENST00000467272 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
UBR4-211ENST00000467272 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
UBR4-211ENST00000467272 CARD10Q9BWT7 1032 aa17.7■□□□□ 0.42
UBR4-211ENST00000467272 NFAT5O94916 1531 aa17.7■□□□□ 0.42
UBR4-211ENST00000467272 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
UBR4-211ENST00000467272 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
UBR4-211ENST00000467272 ABCC6O95255 1503 aa17.68■□□□□ 0.42
UBR4-211ENST00000467272 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
UBR4-211ENST00000467272 TRPM1Q7Z4N2 1603 aa17.68■□□□□ 0.42
UBR4-211ENST00000467272 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
UBR4-211ENST00000467272 KCNH5Q8NCM2 988 aa17.66■□□□□ 0.42
UBR4-211ENST00000467272 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
UBR4-211ENST00000467272 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
UBR4-211ENST00000467272 L3MBTL2Q969R5 705 aa17.65■□□□□ 0.42
UBR4-211ENST00000467272 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
UBR4-211ENST00000467272 MYOM1P52179 1685 aa17.64■□□□□ 0.42
UBR4-211ENST00000467272 SLC15A2Q16348 729 aa17.64■□□□□ 0.41
UBR4-211ENST00000467272 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
UBR4-211ENST00000467272 PAPPAQ13219 1627 aa17.63■□□□□ 0.41
UBR4-211ENST00000467272 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
UBR4-211ENST00000467272 USP31Q70CQ4 1352 aa17.63■□□□□ 0.41
UBR4-211ENST00000467272 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
UBR4-211ENST00000467272 AKAP12Q02952 1782 aa17.63■□□□□ 0.41
UBR4-211ENST00000467272 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
UBR4-211ENST00000467272 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
UBR4-211ENST00000467272 GOLGB1Q14789 3259 aaKnown RBP17.61■□□□□ 0.41
UBR4-211ENST00000467272 EXOC5O00471 708 aa17.61■□□□□ 0.41
UBR4-211ENST00000467272 CD163L1Q9NR16 1453 aa17.61■□□□□ 0.41
UBR4-211ENST00000467272 RGPD5Q99666 1765 aa17.61■□□□□ 0.41
UBR4-211ENST00000467272 SYT17Q9BSW7 474 aa17.6■□□□□ 0.41
UBR4-211ENST00000467272 NHSQ6T4R5 1651 aa17.59■□□□□ 0.41
UBR4-211ENST00000467272 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
UBR4-211ENST00000467272 ERBB3P21860 1342 aa17.59■□□□□ 0.41
UBR4-211ENST00000467272 MTFR1LQ9H019 292 aa17.59■□□□□ 0.41
UBR4-211ENST00000467272 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
UBR4-211ENST00000467272 SBNO2Q9Y2G9 1366 aa17.58■□□□□ 0.4
UBR4-211ENST00000467272 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
UBR4-211ENST00000467272 ZNF784Q8NCA9 323 aaPredicted RBP17.58■□□□□ 0.4
UBR4-211ENST00000467272 FHDC1Q9C0D6 1143 aaPredicted RBP17.58■□□□□ 0.4
UBR4-211ENST00000467272 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
UBR4-211ENST00000467272 KTN1Q86UP2 1357 aaKnown RBP17.56■□□□□ 0.4
UBR4-211ENST00000467272 MON2Q7Z3U7 1717 aa17.56■□□□□ 0.4
UBR4-211ENST00000467272 CSB-PGBD3P0DP91 1061 aa17.55■□□□□ 0.4
UBR4-211ENST00000467272 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
UBR4-211ENST00000467272 SOX12O15370 315 aa17.53■□□□□ 0.4
UBR4-211ENST00000467272 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
UBR4-211ENST00000467272 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
UBR4-211ENST00000467272 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.4
UBR4-211ENST00000467272 IL2RBP14784 551 aa17.51■□□□□ 0.39
UBR4-211ENST00000467272 COL24A1Q17RW2 1714 aa17.51■□□□□ 0.39
UBR4-211ENST00000467272 NME9Q86XW9 330 aa17.51■□□□□ 0.39
UBR4-211ENST00000467272 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
UBR4-211ENST00000467272 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
UBR4-211ENST00000467272 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
UBR4-211ENST00000467272 ARXQ96QS3 562 aa17.5■□□□□ 0.39
UBR4-211ENST00000467272 BTAF1O14981 1849 aa17.49■□□□□ 0.39
UBR4-211ENST00000467272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■□□ 17.5
UBR4-211ENST00000467272 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
UBR4-211ENST00000467272 NLRP2Q9NX02 1062 aa17.48■□□□□ 0.39
UBR4-211ENST00000467272 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
UBR4-211ENST00000467272 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
UBR4-211ENST00000467272 NSD2O96028 1365 aa17.45■□□□□ 0.38
UBR4-211ENST00000467272 QSER1Q2KHR3 1735 aa17.45■□□□□ 0.38
UBR4-211ENST00000467272 SLC27A3Q5K4L6 730 aa17.45■□□□□ 0.38
UBR4-211ENST00000467272 SLC16A10Q8TF71 515 aa17.45■□□□□ 0.38
UBR4-211ENST00000467272 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
UBR4-211ENST00000467272 LTN1O94822 1766 aa17.45■□□□□ 0.38
UBR4-211ENST00000467272 A0A1W2PP64 1363 aa17.44■□□□□ 0.38
UBR4-211ENST00000467272 IP6K1Q92551 441 aa17.44■□□□□ 0.38
UBR4-211ENST00000467272 PNPLA7Q6ZV29 1317 aa17.44■□□□□ 0.38
UBR4-211ENST00000467272 C1QTNF8P60827 252 aa17.42■□□□□ 0.38
UBR4-211ENST00000467272 CHD4Q14839 1912 aa17.41■□□□□ 0.38
UBR4-211ENST00000467272 FAM208AQ9UK61 1670 aaKnown RBP17.41■□□□□ 0.38
UBR4-211ENST00000467272 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
UBR4-211ENST00000467272 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
UBR4-211ENST00000467272 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
UBR4-211ENST00000467272 TESK2Q96S53 571 aa17.38■□□□□ 0.37
UBR4-211ENST00000467272 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
UBR4-211ENST00000467272 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
UBR4-211ENST00000467272 LY75O60449 1722 aa17.37■□□□□ 0.37
UBR4-211ENST00000467272 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
UBR4-211ENST00000467272 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
UBR4-211ENST00000467272 MEGF6O75095 1541 aa17.37■□□□□ 0.37
UBR4-211ENST00000467272 TUBGCP6Q96RT7 1819 aa17.36■□□□□ 0.37
UBR4-211ENST00000467272 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
UBR4-211ENST00000467272 KCNQ4P56696 695 aa17.36■□□□□ 0.37
UBR4-211ENST00000467272 NLGN2Q8NFZ4 835 aa17.36■□□□□ 0.37
UBR4-211ENST00000467272 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
UBR4-211ENST00000467272 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms