RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
TGFBR3-204ENST00000465892 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
TGFBR3-204ENST00000465892 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 GDPD2Q9HCC8 539 aa17.1■□□□□ 0.33
TGFBR3-204ENST00000465892 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
TGFBR3-204ENST00000465892 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.33
TGFBR3-204ENST00000465892 ST18O60284 1047 aa17.07■□□□□ 0.32
TGFBR3-204ENST00000465892 HMOX1P09601 288 aa17.07■□□□□ 0.32
TGFBR3-204ENST00000465892 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
TGFBR3-204ENST00000465892 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
TGFBR3-204ENST00000465892 CCDC94Q9BW85 323 aaPredicted RBP17.06■□□□□ 0.32
TGFBR3-204ENST00000465892 TTC12Q9H892 705 aaPredicted RBP17.06■□□□□ 0.32
TGFBR3-204ENST00000465892 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
TGFBR3-204ENST00000465892 VAMP4O75379 141 aa17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 STK26Q9P289 416 aa17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 IGSF3O75054 1194 aa17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 MTERF4Q7Z6M4 381 aaKnown RBP17.05■□□□□ 0.32
TGFBR3-204ENST00000465892 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
TGFBR3-204ENST00000465892 SDSP20132 328 aa17.04■□□□□ 0.32
TGFBR3-204ENST00000465892 PRKAR2BP31323 418 aa17.04■□□□□ 0.32
TGFBR3-204ENST00000465892 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
TGFBR3-204ENST00000465892 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
TGFBR3-204ENST00000465892 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
TGFBR3-204ENST00000465892 SPDYE4A6NLX3 237 aa17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 MCM5P33992 734 aa17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 NEK4P51957 841 aa17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 INTS3Q68E01 1043 aaKnown RBP17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 TSPY26PQ9H489 355 aa17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 USP25Q9UHP3 1055 aa17.03■□□□□ 0.32
TGFBR3-204ENST00000465892 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.32
TGFBR3-204ENST00000465892 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
TGFBR3-204ENST00000465892 IL16Q14005 1332 aa17.02■□□□□ 0.32
TGFBR3-204ENST00000465892 ADGRB2O60241 1585 aa17.02■□□□□ 0.32
TGFBR3-204ENST00000465892 MYRIPQ8NFW9 859 aa17.02■□□□□ 0.31
TGFBR3-204ENST00000465892 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
TGFBR3-204ENST00000465892 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
TGFBR3-204ENST00000465892 DMTNQ08495 405 aa17.01■□□□□ 0.31
TGFBR3-204ENST00000465892 ATP2B3Q16720 1220 aa17.01■□□□□ 0.31
TGFBR3-204ENST00000465892 TSHZ3Q63HK5 1081 aa17■□□□□ 0.31
TGFBR3-204ENST00000465892 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
TGFBR3-204ENST00000465892 FYB1O15117 783 aa17■□□□□ 0.31
TGFBR3-204ENST00000465892 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
TGFBR3-204ENST00000465892 TMX3Q96JJ7 454 aa17■□□□□ 0.31
TGFBR3-204ENST00000465892 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
TGFBR3-204ENST00000465892 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.315e-7■■□□□ 13.4
TGFBR3-204ENST00000465892 CFAP65Q6ZU64 1925 aaKnown RBP16.99■□□□□ 0.31
TGFBR3-204ENST00000465892 PLCH2O75038 1416 aa16.99■□□□□ 0.31
TGFBR3-204ENST00000465892 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
TGFBR3-204ENST00000465892 A0A1W2PP64 1363 aa16.99■□□□□ 0.31
TGFBR3-204ENST00000465892 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
TGFBR3-204ENST00000465892 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
TGFBR3-204ENST00000465892 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
TGFBR3-204ENST00000465892 ADGRL1O94910 1474 aa16.98■□□□□ 0.31
TGFBR3-204ENST00000465892 DTNBO60941 627 aa16.98■□□□□ 0.31
TGFBR3-204ENST00000465892 CASC1Q6TDU7 716 aa16.98■□□□□ 0.31
TGFBR3-204ENST00000465892 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
TGFBR3-204ENST00000465892 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 ARHGAP31Q2M1Z3 1444 aa16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 MBD3O95983 291 aa16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.97■□□□□ 0.312e-8■■□□□ 11.6
TGFBR3-204ENST00000465892 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 MED14O60244 1454 aa16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 MYOM2P54296 1465 aa16.97■□□□□ 0.31
TGFBR3-204ENST00000465892 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
TGFBR3-204ENST00000465892 QRICH2Q9H0J4 1663 aa16.96■□□□□ 0.31
TGFBR3-204ENST00000465892 KRT24Q2M2I5 525 aa16.96■□□□□ 0.3
TGFBR3-204ENST00000465892 ADCY5O95622 1261 aa16.95■□□□□ 0.3
TGFBR3-204ENST00000465892 ABCC4O15439 1325 aa16.95■□□□□ 0.3
TGFBR3-204ENST00000465892 MINK1Q8N4C8 1332 aaPredicted RBP16.95■□□□□ 0.3
TGFBR3-204ENST00000465892 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
TGFBR3-204ENST00000465892 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
TGFBR3-204ENST00000465892 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 REC8O95072 547 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 GGT6Q6P531 493 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 ARHGAP45Q92619 1136 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 BCL2L12Q9HB09 334 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
TGFBR3-204ENST00000465892 ERC2O15083 957 aa16.93■□□□□ 0.3
TGFBR3-204ENST00000465892 BRD1O95696 1058 aa16.93■□□□□ 0.3
TGFBR3-204ENST00000465892 MROH2AA6NES4 1674 aa16.93■□□□□ 0.3
TGFBR3-204ENST00000465892 TET3O43151 1660 aa16.92■□□□□ 0.3
TGFBR3-204ENST00000465892 FCHSD2O94868 740 aa16.92■□□□□ 0.3
TGFBR3-204ENST00000465892 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.37e-7■■■□□ 17
TGFBR3-204ENST00000465892 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
TGFBR3-204ENST00000465892 ABCC1P33527 1531 aa16.92■□□□□ 0.3
TGFBR3-204ENST00000465892 NSD2O96028 1365 aa16.92■□□□□ 0.3
TGFBR3-204ENST00000465892 UTP14CQ5TAP6 766 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms