RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ERFEQ4G0M1 354 aa7.45□□□□□ -1.22
GARNL3-213ENST00000464616 PPP2R2DQ66LE6 453 aa7.45□□□□□ -1.22
GARNL3-213ENST00000464616 NPAS3Q8IXF0 933 aa7.45□□□□□ -1.22
GARNL3-213ENST00000464616 C1QTNF2Q9BXJ5 285 aa7.45□□□□□ -1.22
GARNL3-213ENST00000464616 VEGFBP49765 207 aa7.44□□□□□ -1.22
GARNL3-213ENST00000464616 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
GARNL3-213ENST00000464616 TSEN34Q9BSV6 310 aaKnown RBP7.44□□□□□ -1.22
GARNL3-213ENST00000464616 USP17L8P0C7I0 530 aa7.43□□□□□ -1.22
GARNL3-213ENST00000464616 IL27Q8NEV9 243 aa7.43□□□□□ -1.22
GARNL3-213ENST00000464616 KCTD15Q96SI1 283 aaPredicted RBP7.43□□□□□ -1.22
GARNL3-213ENST00000464616 KLF16Q9BXK1 252 aaPredicted RBP7.43□□□□□ -1.22
GARNL3-213ENST00000464616 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
GARNL3-213ENST00000464616 RFC5P40937 340 aa7.42□□□□□ -1.22
GARNL3-213ENST00000464616 NBPF20Q3BBV1 942 aa7.42□□□□□ -1.22
GARNL3-213ENST00000464616 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
GARNL3-213ENST00000464616 DZIP3Q86Y13 1208 aaKnown RBP7.42□□□□□ -1.22
GARNL3-213ENST00000464616 TRIM52Q96A61 297 aa7.42□□□□□ -1.22
GARNL3-213ENST00000464616 SOBPA7XYQ1 873 aa7.41□□□□□ -1.22
GARNL3-213ENST00000464616 WIPF1O43516 503 aa7.41□□□□□ -1.22
GARNL3-213ENST00000464616 RAB15P59190 212 aa7.41□□□□□ -1.22
GARNL3-213ENST00000464616 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
GARNL3-213ENST00000464616 PPP1R26Q5T8A7 1209 aaPredicted RBP7.41□□□□□ -1.22
GARNL3-213ENST00000464616 MEIOBQ8N635 442 aa7.41□□□□□ -1.22
GARNL3-213ENST00000464616 GPSM3Q9Y4H4 160 aa7.41□□□□□ -1.22
GARNL3-213ENST00000464616 ADAM32Q8TC27 787 aa7.4□□□□□ -1.22
GARNL3-213ENST00000464616 GOPCQ9HD26 462 aa7.4□□□□□ -1.22
GARNL3-213ENST00000464616 STK17AQ9UEE5 414 aa7.4□□□□□ -1.22
GARNL3-213ENST00000464616 H3BM21 787 aa7.38□□□□□ -1.23
GARNL3-213ENST00000464616 TTLL8A6PVC2 850 aa7.37□□□□□ -1.23
GARNL3-213ENST00000464616 GMPRP36959 345 aa7.37□□□□□ -1.23
GARNL3-213ENST00000464616 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.37□□□□□ -1.23
GARNL3-213ENST00000464616 FBXO31Q5XUX0 539 aaPredicted RBP7.37□□□□□ -1.23
GARNL3-213ENST00000464616 EPS8L1Q8TE68 723 aa7.37□□□□□ -1.23
GARNL3-213ENST00000464616 HMX1Q9NP08 348 aaPredicted RBP7.37□□□□□ -1.23
GARNL3-213ENST00000464616 CBLBQ13191 982 aa7.36□□□□□ -1.23
GARNL3-213ENST00000464616 INTS6LQ5JSJ4 861 aaKnown RBP7.36□□□□□ -1.23
GARNL3-213ENST00000464616 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
GARNL3-213ENST00000464616 RELBQ01201 579 aa7.35□□□□□ -1.23
GARNL3-213ENST00000464616 POLMQ9NP87 494 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-213ENST00000464616 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.23
GARNL3-213ENST00000464616 APBB1O00213 710 aa7.34□□□□□ -1.23
GARNL3-213ENST00000464616 ZSCAN1Q8NBB4 408 aa7.34□□□□□ -1.23
GARNL3-213ENST00000464616 ESF1Q9H501 851 aaKnown RBP7.34□□□□□ -1.23
GARNL3-213ENST00000464616 ZNF330Q9Y3S2 320 aaPredicted RBP7.34□□□□□ -1.23
GARNL3-213ENST00000464616 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
GARNL3-213ENST00000464616 Q6ZVU0 165 aa7.33□□□□□ -1.24
GARNL3-213ENST00000464616 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
GARNL3-213ENST00000464616 DNMT3LQ9UJW3 386 aa7.33□□□□□ -1.24
GARNL3-213ENST00000464616 ZBBXA8MT70 800 aa7.32□□□□□ -1.24
GARNL3-213ENST00000464616 PPFIA3O75145 1194 aa7.32□□□□□ -1.24
GARNL3-213ENST00000464616 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
GARNL3-213ENST00000464616 AGBL1Q96MI9 1066 aa7.32□□□□□ -1.24
GARNL3-213ENST00000464616 ERBB4Q15303 1308 aa7.31□□□□□ -1.24
GARNL3-213ENST00000464616 SPINT1O43278 529 aa7.31□□□□□ -1.24
GARNL3-213ENST00000464616 BRPF1P55201 1214 aaPredicted RBP7.31□□□□□ -1.24
GARNL3-213ENST00000464616 ZNF395Q9H8N7 513 aaPredicted RBP7.31□□□□□ -1.24
GARNL3-213ENST00000464616 TMPRSS4Q9NRS4 437 aa7.31□□□□□ -1.24
GARNL3-213ENST00000464616 ERVH48-1M5A8F1 160 aa7.3□□□□□ -1.24
GARNL3-213ENST00000464616 PTSQ03393 145 aa7.3□□□□□ -1.24
GARNL3-213ENST00000464616 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
GARNL3-213ENST00000464616 SEPT12Q8IYM1 358 aa7.3□□□□□ -1.24
GARNL3-213ENST00000464616 ZNF784Q8NCA9 323 aaPredicted RBP7.3□□□□□ -1.24
GARNL3-213ENST00000464616 INSM2Q96T92 566 aaPredicted RBP7.3□□□□□ -1.24
GARNL3-213ENST00000464616 OCSTAMPQ9BR26 566 aa7.3□□□□□ -1.24
GARNL3-213ENST00000464616 PRM3Q9NNZ6 103 aa7.3□□□□□ -1.24
GARNL3-213ENST00000464616 RNF20Q5VTR2 975 aa7.29□□□□□ -1.24
GARNL3-213ENST00000464616 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
GARNL3-213ENST00000464616 ADH1AP07327 375 aa7.28□□□□□ -1.24
GARNL3-213ENST00000464616 MCCD1P59942 119 aaPredicted RBP7.28□□□□□ -1.24
GARNL3-213ENST00000464616 BANK1Q8NDB2 785 aa7.28□□□□□ -1.24
GARNL3-213ENST00000464616 CYLDQ9NQC7 956 aa7.28□□□□□ -1.24
GARNL3-213ENST00000464616 CDC14CA4D256 554 aa7.27□□□□□ -1.25
GARNL3-213ENST00000464616 CTSOP43234 321 aaPredicted RBP7.27□□□□□ -1.25
GARNL3-213ENST00000464616 CCDC125Q86Z20 511 aa7.27□□□□□ -1.25
GARNL3-213ENST00000464616 NDUFB9Q9Y6M9 179 aa7.27□□□□□ -1.25
GARNL3-213ENST00000464616 GIGYF1O75420 1035 aaPredicted RBP7.26□□□□□ -1.25
GARNL3-213ENST00000464616 FBXO45P0C2W1 286 aa7.26□□□□□ -1.25
GARNL3-213ENST00000464616 VSIG8P0DPA2 414 aa7.26□□□□□ -1.25
GARNL3-213ENST00000464616 PTGIRP43119 386 aa7.26□□□□□ -1.25
GARNL3-213ENST00000464616 CCDC155Q8N6L0 562 aa7.26□□□□□ -1.25
GARNL3-213ENST00000464616 ATP5J2-PTCD1G3V325 749 aa7.25□□□□□ -1.25
GARNL3-213ENST00000464616 NR1H3Q13133 447 aa7.25□□□□□ -1.25
GARNL3-213ENST00000464616 ESPNB1AK53 854 aa7.24□□□□□ -1.25
GARNL3-213ENST00000464616 MEN1O00255 615 aa7.24□□□□□ -1.25
GARNL3-213ENST00000464616 ADD1P35611 737 aaKnown RBP7.24□□□□□ -1.25
GARNL3-213ENST00000464616 LYSMD3Q7Z3D4 306 aa7.24□□□□□ -1.25
GARNL3-213ENST00000464616 GJD4Q96KN9 370 aaPredicted RBP7.24□□□□□ -1.25
GARNL3-213ENST00000464616 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
GARNL3-213ENST00000464616 SV2AQ7L0J3 742 aa7.23□□□□□ -1.25
GARNL3-213ENST00000464616 CNTNAP3BQ96NU0 1288 aa7.23□□□□□ -1.25
GARNL3-213ENST00000464616 CNTNAP3Q9BZ76 1288 aa7.23□□□□□ -1.25
GARNL3-213ENST00000464616 LILRA1O75019 489 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 ITGA6P23229 1130 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 SLC27A3Q5K4L6 730 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 CC2D2BQ6DHV5 1058 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 PRICKLE2Q7Z3G6 844 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 VWA5B2Q8N398 1253 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 PCDHB11Q9Y5F2 797 aa7.22□□□□□ -1.25
GARNL3-213ENST00000464616 SLC35F4A4IF30 521 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms