RNA–Protein interactions for RNA: ENST00000464119.1

SREBF2-206, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-206ENST00000464119 COL18A1P39060 1754 aa16.1■□□□□ 0.17
SREBF2-206ENST00000464119 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
SREBF2-206ENST00000464119 ABCC6O95255 1503 aa16.09■□□□□ 0.17
SREBF2-206ENST00000464119 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
SREBF2-206ENST00000464119 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
SREBF2-206ENST00000464119 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
SREBF2-206ENST00000464119 NSD2O96028 1365 aa16.09■□□□□ 0.17
SREBF2-206ENST00000464119 ZNF772Q68DY9 489 aaPredicted RBP16.08■□□□□ 0.16
SREBF2-206ENST00000464119 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
SREBF2-206ENST00000464119 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
SREBF2-206ENST00000464119 USP21Q9UK80 565 aa16.07■□□□□ 0.16
SREBF2-206ENST00000464119 BLMP54132 1417 aaPredicted RBP16.07■□□□□ 0.16
SREBF2-206ENST00000464119 LTN1O94822 1766 aa16.07■□□□□ 0.16
SREBF2-206ENST00000464119 CAMTA1Q9Y6Y1 1673 aa16.06■□□□□ 0.16
SREBF2-206ENST00000464119 ATRNO75882 1429 aa16.06■□□□□ 0.16
SREBF2-206ENST00000464119 CHRNA2Q15822 529 aa16.06■□□□□ 0.16
SREBF2-206ENST00000464119 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
SREBF2-206ENST00000464119 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
SREBF2-206ENST00000464119 SOX12O15370 315 aa16.04■□□□□ 0.16
SREBF2-206ENST00000464119 POTEAQ6S8J7 498 aa16.04■□□□□ 0.16
SREBF2-206ENST00000464119 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
SREBF2-206ENST00000464119 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
SREBF2-206ENST00000464119 FBLN1P23142 703 aa16.02■□□□□ 0.16
SREBF2-206ENST00000464119 FKBP8Q14318 412 aa16.02■□□□□ 0.16
SREBF2-206ENST00000464119 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.16
SREBF2-206ENST00000464119 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.16
SREBF2-206ENST00000464119 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
SREBF2-206ENST00000464119 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
SREBF2-206ENST00000464119 MAP3K19Q56UN5 1328 aa16.01■□□□□ 0.15
SREBF2-206ENST00000464119 VPS72Q15906 364 aa16.01■□□□□ 0.15
SREBF2-206ENST00000464119 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
SREBF2-206ENST00000464119 PEAK1Q9H792 1746 aa16.01■□□□□ 0.15
SREBF2-206ENST00000464119 RTL1A6NKG5 1358 aa16■□□□□ 0.15
SREBF2-206ENST00000464119 RGPD5Q99666 1765 aa16■□□□□ 0.15
SREBF2-206ENST00000464119 PPP2R1AP30153 589 aa16■□□□□ 0.15
SREBF2-206ENST00000464119 GLI3P10071 1580 aa16■□□□□ 0.15
SREBF2-206ENST00000464119 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
SREBF2-206ENST00000464119 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
SREBF2-206ENST00000464119 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
SREBF2-206ENST00000464119 IP6K1Q92551 441 aa15.99■□□□□ 0.15
SREBF2-206ENST00000464119 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
SREBF2-206ENST00000464119 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
SREBF2-206ENST00000464119 SPATA31A5Q5VU36 1347 aa15.97■□□□□ 0.15
SREBF2-206ENST00000464119 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
SREBF2-206ENST00000464119 SPATA31A7Q8IWB4 1347 aa15.97■□□□□ 0.15
SREBF2-206ENST00000464119 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
SREBF2-206ENST00000464119 HOXC9P31274 260 aa15.97■□□□□ 0.15
SREBF2-206ENST00000464119 RBM6P78332 1123 aaKnown RBP15.97■□□□□ 0.15
SREBF2-206ENST00000464119 GJD4Q96KN9 370 aaPredicted RBP15.97■□□□□ 0.15
SREBF2-206ENST00000464119 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
SREBF2-206ENST00000464119 WDR17Q8IZU2 1322 aa15.96■□□□□ 0.15
SREBF2-206ENST00000464119 LARP1Q6PKG0 1096 aaKnown RBP15.96■□□□□ 0.15
SREBF2-206ENST00000464119 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
SREBF2-206ENST00000464119 FLT4P35916 1363 aa15.96■□□□□ 0.15
SREBF2-206ENST00000464119 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
SREBF2-206ENST00000464119 RXRBP28702 533 aa15.95■□□□□ 0.14
SREBF2-206ENST00000464119 EVA1CP58658 441 aa15.95■□□□□ 0.14
SREBF2-206ENST00000464119 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
SREBF2-206ENST00000464119 STRN4Q9NRL3 753 aa15.95■□□□□ 0.14
SREBF2-206ENST00000464119 FAM208AQ9UK61 1670 aaKnown RBP15.95■□□□□ 0.14
SREBF2-206ENST00000464119 ERBB3P21860 1342 aa15.94■□□□□ 0.14
SREBF2-206ENST00000464119 CRB1P82279 1406 aa15.94■□□□□ 0.14
SREBF2-206ENST00000464119 TNNT2P45379 298 aaPredicted RBP15.94■□□□□ 0.14
SREBF2-206ENST00000464119 AMPHP49418 695 aa15.94■□□□□ 0.14
SREBF2-206ENST00000464119 NGEFQ8N5V2 710 aa15.94■□□□□ 0.14
SREBF2-206ENST00000464119 ONECUT3O60422 494 aaPredicted RBP15.93■□□□□ 0.14
SREBF2-206ENST00000464119 ANKRD24Q8TF21 1146 aa15.93■□□□□ 0.14
SREBF2-206ENST00000464119 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
SREBF2-206ENST00000464119 RGS12O14924 1447 aa15.92■□□□□ 0.14
SREBF2-206ENST00000464119 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
SREBF2-206ENST00000464119 ILDR2Q71H61 639 aa15.91■□□□□ 0.14
SREBF2-206ENST00000464119 CARD10Q9BWT7 1032 aa15.91■□□□□ 0.14
SREBF2-206ENST00000464119 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
SREBF2-206ENST00000464119 CCDC9Q9Y3X0 531 aaKnown RBP15.91■□□□□ 0.14
SREBF2-206ENST00000464119 WNK3Q9BYP7 1800 aa15.9■□□□□ 0.14
SREBF2-206ENST00000464119 BARGINQ6ZT62 677 aa15.9■□□□□ 0.14
SREBF2-206ENST00000464119 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
SREBF2-206ENST00000464119 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
SREBF2-206ENST00000464119 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
SREBF2-206ENST00000464119 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
SREBF2-206ENST00000464119 PPM1GO15355 546 aaPredicted RBP15.88■□□□□ 0.13
SREBF2-206ENST00000464119 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
SREBF2-206ENST00000464119 DISP2A7MBM2 1401 aa15.87■□□□□ 0.13
SREBF2-206ENST00000464119 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
SREBF2-206ENST00000464119 MTHFSP49914 203 aa15.87■□□□□ 0.13
SREBF2-206ENST00000464119 FAM98CQ17RN3 349 aaKnown RBP15.87■□□□□ 0.13
SREBF2-206ENST00000464119 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
SREBF2-206ENST00000464119 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
SREBF2-206ENST00000464119 PARP4Q9UKK3 1724 aaKnown RBP15.86■□□□□ 0.13
SREBF2-206ENST00000464119 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
SREBF2-206ENST00000464119 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
SREBF2-206ENST00000464119 ADAMTS8Q9UP79 889 aa15.86■□□□□ 0.13
SREBF2-206ENST00000464119 COL3A1P02461 1466 aaPredicted RBP15.85■□□□□ 0.13
SREBF2-206ENST00000464119 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
SREBF2-206ENST00000464119 NBPF6Q5VWK0 638 aa15.85■□□□□ 0.13
SREBF2-206ENST00000464119 SEPT12Q8IYM1 358 aa15.85■□□□□ 0.13
SREBF2-206ENST00000464119 NBPF4Q96M43 638 aa15.85■□□□□ 0.13
SREBF2-206ENST00000464119 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
SREBF2-206ENST00000464119 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
SREBF2-206ENST00000464119 LRRC37A3O60309 1634 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms