RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 L3MBTL2Q969R5 705 aa24.9■■□□□ 1.58
HMGN1-210ENST00000464078 CDCA7Q9BWT1 371 aaPredicted RBP24.9■■□□□ 1.58
HMGN1-210ENST00000464078 TOM1L2Q6ZVM7 507 aa24.89■■□□□ 1.58
HMGN1-210ENST00000464078 NFAT5O94916 1531 aa24.89■■□□□ 1.57
HMGN1-210ENST00000464078 CASZ1Q86V15 1759 aa24.89■■□□□ 1.57
HMGN1-210ENST00000464078 ZBTB7CA1YPR0 619 aa24.88■■□□□ 1.57
HMGN1-210ENST00000464078 ARHGEF25Q86VW2 580 aa24.88■■□□□ 1.57
HMGN1-210ENST00000464078 SPON1Q9HCB6 807 aa24.88■■□□□ 1.57
HMGN1-210ENST00000464078 RGPD5Q99666 1765 aa24.88■■□□□ 1.57
HMGN1-210ENST00000464078 KCNH5Q8NCM2 988 aa24.87■■□□□ 1.57
HMGN1-210ENST00000464078 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-210ENST00000464078 BCL11BQ9C0K0 894 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-210ENST00000464078 AXIN2Q9Y2T1 843 aa24.87■■□□□ 1.57
HMGN1-210ENST00000464078 NINLQ9Y2I6 1382 aa24.87■■□□□ 1.57
HMGN1-210ENST00000464078 TTC21BQ7Z4L5 1316 aa24.86■■□□□ 1.57
HMGN1-210ENST00000464078 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
HMGN1-210ENST00000464078 MON2Q7Z3U7 1717 aa24.86■■□□□ 1.57
HMGN1-210ENST00000464078 USP54Q70EL1 1684 aa24.86■■□□□ 1.57
HMGN1-210ENST00000464078 KCNQ2O43526 872 aa24.85■■□□□ 1.57
HMGN1-210ENST00000464078 ROCK2O75116 1388 aaKnown RBP24.84■■□□□ 1.57
HMGN1-210ENST00000464078 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
HMGN1-210ENST00000464078 CARD10Q9BWT7 1032 aa24.83■■□□□ 1.57
HMGN1-210ENST00000464078 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
HMGN1-210ENST00000464078 ANO8Q9HCE9 1232 aaPredicted RBP24.81■■□□□ 1.56
HMGN1-210ENST00000464078 CCDC7Q96M83 1385 aa24.8■■□□□ 1.56
HMGN1-210ENST00000464078 PTF1AQ7RTS3 328 aa24.8■■□□□ 1.56
HMGN1-210ENST00000464078 PPP1R1BQ9UD71 204 aaPredicted RBP24.8■■□□□ 1.56
HMGN1-210ENST00000464078 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
HMGN1-210ENST00000464078 KTN1Q86UP2 1357 aaKnown RBP24.79■■□□□ 1.56
HMGN1-210ENST00000464078 PROM2Q8N271 834 aa24.77■■□□□ 1.56
HMGN1-210ENST00000464078 NHSQ6T4R5 1651 aa24.77■■□□□ 1.56
HMGN1-210ENST00000464078 USP31Q70CQ4 1352 aa24.77■■□□□ 1.56
HMGN1-210ENST00000464078 CSB-PGBD3P0DP91 1061 aa24.75■■□□□ 1.55
HMGN1-210ENST00000464078 YY1P25490 414 aa24.74■■□□□ 1.55
HMGN1-210ENST00000464078 SIN3AQ96ST3 1273 aa24.74■■□□□ 1.55
HMGN1-210ENST00000464078 LTN1O94822 1766 aa24.73■■□□□ 1.55
HMGN1-210ENST00000464078 MYOM1P52179 1685 aa24.73■■□□□ 1.55
HMGN1-210ENST00000464078 CD163L1Q9NR16 1453 aa24.73■■□□□ 1.55
HMGN1-210ENST00000464078 SOX12O15370 315 aa24.73■■□□□ 1.55
HMGN1-210ENST00000464078 EXOC5O00471 708 aa24.71■■□□□ 1.55
HMGN1-210ENST00000464078 ERBB3P21860 1342 aa24.7■■□□□ 1.54
HMGN1-210ENST00000464078 DCAF8L1A6NGE4 600 aa24.7■■□□□ 1.54
HMGN1-210ENST00000464078 TXNRD1Q16881 649 aa24.7■■□□□ 1.54
HMGN1-210ENST00000464078 PAPPAQ13219 1627 aa24.69■■□□□ 1.54
HMGN1-210ENST00000464078 PDGFDQ9GZP0 370 aaPredicted RBP24.69■■□□□ 1.54
HMGN1-210ENST00000464078 PTGER2P43116 358 aa24.68■■□□□ 1.54
HMGN1-210ENST00000464078 STK32BQ9NY57 414 aa24.67■■□□□ 1.54
HMGN1-210ENST00000464078 SLC15A2Q16348 729 aa24.66■■□□□ 1.54
HMGN1-210ENST00000464078 EDC4Q6P2E9 1401 aaKnown RBP24.66■■□□□ 1.54
HMGN1-210ENST00000464078 ZBTB7AO95365 584 aa24.65■■□□□ 1.54
HMGN1-210ENST00000464078 NEUROD1Q13562 356 aa24.65■■□□□ 1.54
HMGN1-210ENST00000464078 BTAF1O14981 1849 aa24.64■■□□□ 1.54
HMGN1-210ENST00000464078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.64■■□□□ 1.54
HMGN1-210ENST00000464078 FAM208AQ9UK61 1670 aaKnown RBP24.63■■□□□ 1.53
HMGN1-210ENST00000464078 NME9Q86XW9 330 aa24.63■■□□□ 1.53
HMGN1-210ENST00000464078 IL2RBP14784 551 aa24.61■■□□□ 1.53
HMGN1-210ENST00000464078 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
HMGN1-210ENST00000464078 MTFR1LQ9H019 292 aa24.6■■□□□ 1.53
HMGN1-210ENST00000464078 A0A1W2PP64 1363 aa24.59■■□□□ 1.53
HMGN1-210ENST00000464078 HDGFL2Q7Z4V5 671 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-210ENST00000464078 SGIP1Q9BQI5 828 aa24.59■■□□□ 1.53
HMGN1-210ENST00000464078 CARD11Q9BXL7 1154 aa24.59■■□□□ 1.53
HMGN1-210ENST00000464078 ANKRD24Q8TF21 1146 aa24.58■■□□□ 1.53
HMGN1-210ENST00000464078 PUS7Q96PZ0 661 aaKnown RBP24.58■■□□□ 1.53
HMGN1-210ENST00000464078 TERF2IPQ9NYB0 399 aa24.57■■□□□ 1.52
HMGN1-210ENST00000464078 ATF5Q9Y2D1 282 aaPredicted RBP24.57■■□□□ 1.52
HMGN1-210ENST00000464078 QSER1Q2KHR3 1735 aa24.56■■□□□ 1.52
HMGN1-210ENST00000464078 ACSBG1Q96GR2 724 aa24.56■■□□□ 1.52
HMGN1-210ENST00000464078 UTRNP46939 3433 aa24.55■■□□□ 1.52
HMGN1-210ENST00000464078 MAP3K5Q99683 1374 aa24.55■■□□□ 1.52
HMGN1-210ENST00000464078 TMC1Q8TDI8 760 aa24.55■■□□□ 1.52
HMGN1-210ENST00000464078 SLC12A5Q9H2X9 1139 aa24.55■■□□□ 1.52
HMGN1-210ENST00000464078 SYT17Q9BSW7 474 aa24.54■■□□□ 1.52
HMGN1-210ENST00000464078 FHDC1Q9C0D6 1143 aaPredicted RBP24.54■■□□□ 1.52
HMGN1-210ENST00000464078 IP6K1Q92551 441 aa24.51■■□□□ 1.51
HMGN1-210ENST00000464078 COL24A1Q17RW2 1714 aa24.51■■□□□ 1.51
HMGN1-210ENST00000464078 CHD4Q14839 1912 aa24.51■■□□□ 1.51
HMGN1-210ENST00000464078 KAT6BQ8WYB5 2073 aa24.5■■□□□ 1.51
HMGN1-210ENST00000464078 ZNF827Q17R98 1081 aa24.49■■□□□ 1.51
HMGN1-210ENST00000464078 TONSLQ96HA7 1378 aa24.48■■□□□ 1.51
HMGN1-210ENST00000464078 SHANK3Q9BYB0 1731 aa24.48■■□□□ 1.51
HMGN1-210ENST00000464078 LRRC4BQ9NT99 713 aa24.48■■□□□ 1.51
HMGN1-210ENST00000464078 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
HMGN1-210ENST00000464078 ARXQ96QS3 562 aa24.47■■□□□ 1.51
HMGN1-210ENST00000464078 SLC27A3Q5K4L6 730 aa24.46■■□□□ 1.51
HMGN1-210ENST00000464078 LY75O60449 1722 aa24.46■■□□□ 1.51
HMGN1-210ENST00000464078 AKT1S1Q96B36 256 aa24.45■■□□□ 1.5
HMGN1-210ENST00000464078 TESK2Q96S53 571 aa24.45■■□□□ 1.5
HMGN1-210ENST00000464078 TUBGCP6Q96RT7 1819 aa24.45■■□□□ 1.5
HMGN1-210ENST00000464078 ANKRD36BQ8N2N9 1353 aa24.44■■□□□ 1.5
HMGN1-210ENST00000464078 ZNF784Q8NCA9 323 aaPredicted RBP24.44■■□□□ 1.5
HMGN1-210ENST00000464078 MAP3K19Q56UN5 1328 aa24.43■■□□□ 1.5
HMGN1-210ENST00000464078 SLC16A10Q8TF71 515 aa24.43■■□□□ 1.5
HMGN1-210ENST00000464078 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
HMGN1-210ENST00000464078 RGPD2P0DJD1 1756 aa24.42■■□□□ 1.5
HMGN1-210ENST00000464078 NSD2O96028 1365 aa24.42■■□□□ 1.5
HMGN1-210ENST00000464078 HOXC9P31274 260 aa24.41■■□□□ 1.5
HMGN1-210ENST00000464078 COG3Q96JB2 828 aa24.41■■□□□ 1.5
HMGN1-210ENST00000464078 MEGF6O75095 1541 aa24.4■■□□□ 1.5
HMGN1-210ENST00000464078 SLC24A1O60721 1099 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms