RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 LARP1Q6PKG0 1096 aaKnown RBP36■■■■□ 3.35
SURF1-203ENST00000463965 SPATA31A1Q5TZJ5 1347 aa36■■■■□ 3.35
SURF1-203ENST00000463965 COL5A2P05997 1499 aaPredicted RBP35.99■■■■□ 3.35
SURF1-203ENST00000463965 ONECUT3O60422 494 aaPredicted RBP35.99■■■■□ 3.35
SURF1-203ENST00000463965 FAM98CQ17RN3 349 aaKnown RBP35.99■■■■□ 3.35
SURF1-203ENST00000463965 AXIN2Q9Y2T1 843 aa35.99■■■■□ 3.35
SURF1-203ENST00000463965 SEPT12Q8IYM1 358 aa35.98■■■■□ 3.35
SURF1-203ENST00000463965 USP35Q9P2H5 1018 aa35.96■■■■□ 3.35
SURF1-203ENST00000463965 ABCC6O95255 1503 aa35.96■■■■□ 3.35
SURF1-203ENST00000463965 KIF20BQ96Q89 1820 aa35.96■■■■□ 3.35
SURF1-203ENST00000463965 COL18A1P39060 1754 aa35.95■■■■□ 3.35
SURF1-203ENST00000463965 CSB-PGBD3P0DP91 1061 aa35.95■■■■□ 3.35
SURF1-203ENST00000463965 ZEB1P37275 1124 aaPredicted RBP35.95■■■■□ 3.35
SURF1-203ENST00000463965 TOM1L2Q6ZVM7 507 aa35.94■■■■□ 3.34
SURF1-203ENST00000463965 CCDC7Q96M83 1385 aa35.93■■■■□ 3.34
SURF1-203ENST00000463965 TCP11L2Q8N4U5 519 aa35.93■■■■□ 3.34
SURF1-203ENST00000463965 CRB1P82279 1406 aa35.92■■■■□ 3.34
SURF1-203ENST00000463965 WDR17Q8IZU2 1322 aa35.92■■■■□ 3.34
SURF1-203ENST00000463965 THRAP3Q9Y2W1 955 aaKnown RBP35.92■■■■□ 3.34
SURF1-203ENST00000463965 KNSTRNQ9Y448 316 aa35.92■■■■□ 3.34
SURF1-203ENST00000463965 AMPHP49418 695 aa35.91■■■■□ 3.34
SURF1-203ENST00000463965 IP6K1Q92551 441 aa35.9■■■■□ 3.34
SURF1-203ENST00000463965 LTN1O94822 1766 aa35.89■■■■□ 3.34
SURF1-203ENST00000463965 MAP3K19Q56UN5 1328 aa35.89■■■■□ 3.34
SURF1-203ENST00000463965 WASHC2AQ641Q2 1341 aa35.89■■■■□ 3.34
SURF1-203ENST00000463965 BARGINQ6ZT62 677 aa35.89■■■■□ 3.34
SURF1-203ENST00000463965 FBLN1P23142 703 aa35.87■■■■□ 3.33
SURF1-203ENST00000463965 BLMP54132 1417 aaPredicted RBP35.85■■■■□ 3.33
SURF1-203ENST00000463965 RRS1Q15050 365 aaKnown RBP35.85■■■■□ 3.33
SURF1-203ENST00000463965 NSD2O96028 1365 aa35.85■■■■□ 3.33
SURF1-203ENST00000463965 KRT27Q7Z3Y8 459 aa35.84■■■■□ 3.33
SURF1-203ENST00000463965 CARD10Q9BWT7 1032 aa35.84■■■■□ 3.33
SURF1-203ENST00000463965 ANKRD24Q8TF21 1146 aa35.83■■■■□ 3.33
SURF1-203ENST00000463965 RGPD5Q99666 1765 aa35.83■■■■□ 3.33
SURF1-203ENST00000463965 ERBB3P21860 1342 aa35.83■■■■□ 3.33
SURF1-203ENST00000463965 HOXC9P31274 260 aa35.82■■■■□ 3.32
SURF1-203ENST00000463965 RTL1A6NKG5 1358 aa35.81■■■■□ 3.32
SURF1-203ENST00000463965 NLRP2Q9NX02 1062 aa35.79■■■■□ 3.32
SURF1-203ENST00000463965 UPF1Q92900 1129 aaKnown RBP eCLIP35.78■■■■□ 3.32
SURF1-203ENST00000463965 KIF24Q5T7B8 1368 aa35.77■■■■□ 3.32
SURF1-203ENST00000463965 LTV1Q96GA3 475 aaPredicted RBP35.77■■■■□ 3.32
SURF1-203ENST00000463965 THSD7AQ9UPZ6 1657 aa35.76■■■■□ 3.32
SURF1-203ENST00000463965 MORC1Q86VD1 984 aa35.76■■■■□ 3.32
SURF1-203ENST00000463965 CDCA7Q9BWT1 371 aaPredicted RBP35.76■■■■□ 3.32
SURF1-203ENST00000463965 BRWD3Q6RI45 1802 aa35.75■■■■□ 3.31
SURF1-203ENST00000463965 TNNT2P45379 298 aaPredicted RBP35.74■■■■□ 3.31
SURF1-203ENST00000463965 PDE3BQ13370 1112 aa35.74■■■■□ 3.31
SURF1-203ENST00000463965 FLT4P35916 1363 aa35.73■■■■□ 3.31
SURF1-203ENST00000463965 PPM1GO15355 546 aaPredicted RBP35.72■■■■□ 3.31
SURF1-203ENST00000463965 ANKRD26Q9UPS8 1709 aa35.71■■■■□ 3.31
SURF1-203ENST00000463965 PER1O15534 1290 aaPredicted RBP35.71■■■■□ 3.31
SURF1-203ENST00000463965 AMER1Q5JTC6 1135 aaPredicted RBP35.71■■■■□ 3.31
SURF1-203ENST00000463965 EMILIN1Q9Y6C2 1016 aa35.71■■■■□ 3.31
SURF1-203ENST00000463965 SMG6Q86US8 1419 aaKnown RBP35.7■■■■□ 3.31
SURF1-203ENST00000463965 INSRP06213 1382 aa35.68■■■■□ 3.3
SURF1-203ENST00000463965 DDB1Q16531 1140 aa35.67■■■■□ 3.3
SURF1-203ENST00000463965 HSP90AB2PQ58FF8 381 aa35.67■■■■□ 3.3
SURF1-203ENST00000463965 POLKQ9UBT6 870 aa35.67■■■■□ 3.3
SURF1-203ENST00000463965 CCDC125Q86Z20 511 aa35.66■■■■□ 3.3
SURF1-203ENST00000463965 FAM208AQ9UK61 1670 aaKnown RBP35.62■■■■□ 3.29
SURF1-203ENST00000463965 IL2RBP14784 551 aa35.62■■■■□ 3.29
SURF1-203ENST00000463965 MAP2P11137 1827 aaKnown RBP35.62■■■■□ 3.29
SURF1-203ENST00000463965 PARP4Q9UKK3 1724 aaKnown RBP35.61■■■■□ 3.29
SURF1-203ENST00000463965 EXOC5O00471 708 aa35.61■■■■□ 3.29
SURF1-203ENST00000463965 CC2D1BQ5T0F9 858 aaKnown RBP35.61■■■■□ 3.29
SURF1-203ENST00000463965 FAM196AQ6ZSG2 479 aa35.61■■■■□ 3.29
SURF1-203ENST00000463965 FAM182BQ5T319 152 aa35.6■■■■□ 3.29
SURF1-203ENST00000463965 PEAK1Q9H792 1746 aa35.6■■■■□ 3.29
SURF1-203ENST00000463965 DISP2A7MBM2 1401 aa35.59■■■■□ 3.29
SURF1-203ENST00000463965 SF3B2Q13435 895 aaKnown RBP35.59■■■■□ 3.29
SURF1-203ENST00000463965 NPC1L1Q9UHC9 1359 aa35.59■■■■□ 3.29
SURF1-203ENST00000463965 EP400Q96L91 3159 aa35.56■■■■□ 3.28
SURF1-203ENST00000463965 WNK3Q9BYP7 1800 aa35.55■■■■□ 3.28
SURF1-203ENST00000463965 NBPF6Q5VWK0 638 aa35.55■■■■□ 3.28
SURF1-203ENST00000463965 NBPF4Q96M43 638 aa35.55■■■■□ 3.28
SURF1-203ENST00000463965 CNGB1Q14028 1251 aaPredicted RBP35.53■■■■□ 3.28
SURF1-203ENST00000463965 LRRC37A3O60309 1634 aa35.52■■■■□ 3.28
SURF1-203ENST00000463965 USHBP1Q8N6Y0 703 aa35.49■■■■□ 3.27
SURF1-203ENST00000463965 RAPGEF4Q8WZA2 1011 aa35.49■■■■□ 3.27
SURF1-203ENST00000463965 OVOS2A0A0G2JMS6 1433 aa35.49■■■■□ 3.27
SURF1-203ENST00000463965 TNS2Q63HR2 1409 aa35.49■■■■□ 3.27
SURF1-203ENST00000463965 MARCH10Q8NA82 808 aaPredicted RBP35.46■■■■□ 3.27
SURF1-203ENST00000463965 RGPD2P0DJD1 1756 aa35.46■■■■□ 3.27
SURF1-203ENST00000463965 EIF4A2Q14240 407 aaKnown RBP35.45■■■■□ 3.27
SURF1-203ENST00000463965 TRIM37O94972 964 aa35.43■■■■□ 3.26
SURF1-203ENST00000463965 TATP17735 454 aaPredicted RBP35.43■■■■□ 3.26
SURF1-203ENST00000463965 MTHFSP49914 203 aa35.43■■■■□ 3.26
SURF1-203ENST00000463965 EYA1Q99502 592 aa35.42■■■■□ 3.26
SURF1-203ENST00000463965 BAG6P46379 1132 aa35.41■■■■□ 3.26
SURF1-203ENST00000463965 ZCRB1Q8TBF4 217 aaKnown RBP35.4■■■■□ 3.26
SURF1-203ENST00000463965 DDX54Q8TDD1 881 aaKnown RBP35.38■■■■□ 3.25
SURF1-203ENST00000463965 DDX10Q13206 875 aaKnown RBP35.37■■■■□ 3.25
SURF1-203ENST00000463965 BCL9O00512 1426 aa35.37■■■■□ 3.25
SURF1-203ENST00000463965 RGPD1P0DJD0 1748 aa35.37■■■■□ 3.25
SURF1-203ENST00000463965 MEGF6O75095 1541 aa35.37■■■■□ 3.25
SURF1-203ENST00000463965 DEFB132Q7Z7B7 95 aa35.35■■■■□ 3.25
SURF1-203ENST00000463965 NCAPD2Q15021 1401 aa35.33■■■■□ 3.25
SURF1-203ENST00000463965 APBA3O96018 575 aa35.33■■■■□ 3.25
SURF1-203ENST00000463965 IGSF1Q8N6C5 1336 aa35.32■■■■□ 3.24
SURF1-203ENST00000463965 BCL11BQ9C0K0 894 aaPredicted RBP35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms