RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 GCP02774 474 aa24.59■■□□□ 1.53
SF1-212ENST00000463343 PDE3BQ13370 1112 aa24.59■■□□□ 1.53
SF1-212ENST00000463343 EZH2Q15910 746 aaKnown RBP24.59■■□□□ 1.53
SF1-212ENST00000463343 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
SF1-212ENST00000463343 ANKRD36BQ8N2N9 1353 aa24.58■■□□□ 1.53
SF1-212ENST00000463343 R3HDM1Q15032 1099 aaKnown RBP24.58■■□□□ 1.53
SF1-212ENST00000463343 NRKQ7Z2Y5 1582 aa24.58■■□□□ 1.52
SF1-212ENST00000463343 LMO7Q8WWI1 1683 aa24.57■■□□□ 1.52
SF1-212ENST00000463343 NME9Q86XW9 330 aa24.57■■□□□ 1.52
SF1-212ENST00000463343 MON2Q7Z3U7 1717 aa24.56■■□□□ 1.52
SF1-212ENST00000463343 EDC4Q6P2E9 1401 aaKnown RBP24.56■■□□□ 1.52
SF1-212ENST00000463343 APBA3O96018 575 aa24.56■■□□□ 1.52
SF1-212ENST00000463343 LARP1Q6PKG0 1096 aaKnown RBP24.56■■□□□ 1.52
SF1-212ENST00000463343 USP35Q9P2H5 1018 aa24.55■■□□□ 1.52
SF1-212ENST00000463343 CARD14Q9BXL6 1004 aa24.54■■□□□ 1.52
SF1-212ENST00000463343 PIK3C2AO00443 1686 aa24.53■■□□□ 1.52
SF1-212ENST00000463343 USP31Q70CQ4 1352 aa24.52■■□□□ 1.52
SF1-212ENST00000463343 KIF7Q2M1P5 1343 aa24.51■■□□□ 1.51
SF1-212ENST00000463343 AATKQ6ZMQ8 1374 aa24.5■■□□□ 1.51
SF1-212ENST00000463343 COL5A2P05997 1499 aaPredicted RBP24.49■■□□□ 1.51
SF1-212ENST00000463343 MYOM1P52179 1685 aa24.49■■□□□ 1.51
SF1-212ENST00000463343 CRB1P82279 1406 aa24.48■■□□□ 1.51
SF1-212ENST00000463343 PARP4Q9UKK3 1724 aaKnown RBP24.47■■□□□ 1.51
SF1-212ENST00000463343 SLIT3O75094 1523 aa24.47■■□□□ 1.51
SF1-212ENST00000463343 FYB1O15117 783 aa24.47■■□□□ 1.51
SF1-212ENST00000463343 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
SF1-212ENST00000463343 NBPF14Q5TI25 921 aa24.47■■□□□ 1.51
SF1-212ENST00000463343 PANK3Q9H999 370 aa24.47■■□□□ 1.51
SF1-212ENST00000463343 KCNH5Q8NCM2 988 aa24.46■■□□□ 1.51
SF1-212ENST00000463343 RREB1Q92766 1687 aa24.46■■□□□ 1.51
SF1-212ENST00000463343 SOX12O15370 315 aa24.45■■□□□ 1.5
SF1-212ENST00000463343 ARHGEF25Q86VW2 580 aa24.43■■□□□ 1.5
SF1-212ENST00000463343 NSD3Q9BZ95 1437 aa24.43■■□□□ 1.5
SF1-212ENST00000463343 CCDC7Q96M83 1385 aa24.42■■□□□ 1.5
SF1-212ENST00000463343 WASHC2AQ641Q2 1341 aa24.42■■□□□ 1.5
SF1-212ENST00000463343 ZBTB7CA1YPR0 619 aa24.42■■□□□ 1.5
SF1-212ENST00000463343 PLSCR1O15162 318 aa24.42■■□□□ 1.5
SF1-212ENST00000463343 COG3Q96JB2 828 aa24.42■■□□□ 1.5
SF1-212ENST00000463343 GGNBP2Q9H3C7 697 aa24.42■■□□□ 1.5
SF1-212ENST00000463343 CDCA7Q9BWT1 371 aaPredicted RBP24.41■■□□□ 1.5
SF1-212ENST00000463343 OVOS2A0A0J9YW53 1432 aa24.41■■□□□ 1.5
SF1-212ENST00000463343 OVOS2Q6IE36 1432 aa24.41■■□□□ 1.5
SF1-212ENST00000463343 NUP188Q5SRE5 1749 aa24.41■■□□□ 1.5
SF1-212ENST00000463343 OVOS2A0A0G2JMS6 1433 aa24.4■■□□□ 1.5
SF1-212ENST00000463343 COL18A1P39060 1754 aa24.39■■□□□ 1.5
SF1-212ENST00000463343 PEAK1Q9H792 1746 aa24.38■■□□□ 1.49
SF1-212ENST00000463343 USP54Q70EL1 1684 aa24.38■■□□□ 1.49
SF1-212ENST00000463343 DDB1Q16531 1140 aa24.38■■□□□ 1.49
SF1-212ENST00000463343 WDR17Q8IZU2 1322 aa24.37■■□□□ 1.49
SF1-212ENST00000463343 BCL9O00512 1426 aa24.37■■□□□ 1.49
SF1-212ENST00000463343 NFAT5O94916 1531 aa24.37■■□□□ 1.49
SF1-212ENST00000463343 FBLN1P23142 703 aa24.37■■□□□ 1.49
SF1-212ENST00000463343 TOM1L2Q6ZVM7 507 aa24.37■■□□□ 1.49
SF1-212ENST00000463343 AXIN2Q9Y2T1 843 aa24.37■■□□□ 1.49
SF1-212ENST00000463343 RGPD3A6NKT7 1758 aaPredicted RBP24.36■■□□□ 1.49
SF1-212ENST00000463343 RGPD4Q7Z3J3 1758 aa24.36■■□□□ 1.49
SF1-212ENST00000463343 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
SF1-212ENST00000463343 BCL11BQ9C0K0 894 aaPredicted RBP24.35■■□□□ 1.49
SF1-212ENST00000463343 SBF2Q86WG5 1849 aa24.35■■□□□ 1.49
SF1-212ENST00000463343 SPON1Q9HCB6 807 aa24.34■■□□□ 1.49
SF1-212ENST00000463343 CARD10Q9BWT7 1032 aa24.33■■□□□ 1.49
SF1-212ENST00000463343 KCNQ2O43526 872 aa24.32■■□□□ 1.48
SF1-212ENST00000463343 LRRC37A3O60309 1634 aa24.32■■□□□ 1.48
SF1-212ENST00000463343 PER1O15534 1290 aaPredicted RBP24.31■■□□□ 1.48
SF1-212ENST00000463343 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
SF1-212ENST00000463343 MARCH10Q8NA82 808 aaPredicted RBP24.29■■□□□ 1.48
SF1-212ENST00000463343 MAP3K19Q56UN5 1328 aa24.28■■□□□ 1.48
SF1-212ENST00000463343 ABCC6O95255 1503 aa24.27■■□□□ 1.48
SF1-212ENST00000463343 KIF20BQ96Q89 1820 aa24.27■■□□□ 1.48
SF1-212ENST00000463343 RRS1Q15050 365 aaKnown RBP24.27■■□□□ 1.48
SF1-212ENST00000463343 IP6K1Q92551 441 aa24.27■■□□□ 1.48
SF1-212ENST00000463343 WNK3Q9BYP7 1800 aa24.26■■□□□ 1.47
SF1-212ENST00000463343 EXOC5O00471 708 aa24.26■■□□□ 1.47
SF1-212ENST00000463343 AMER1Q5JTC6 1135 aaPredicted RBP24.25■■□□□ 1.47
SF1-212ENST00000463343 PROM2Q8N271 834 aa24.25■■□□□ 1.47
SF1-212ENST00000463343 RGPD5Q99666 1765 aa24.24■■□□□ 1.47
SF1-212ENST00000463343 PPP1R1BQ9UD71 204 aaPredicted RBP24.24■■□□□ 1.47
SF1-212ENST00000463343 CSB-PGBD3P0DP91 1061 aa24.23■■□□□ 1.47
SF1-212ENST00000463343 AMPHP49418 695 aa24.23■■□□□ 1.47
SF1-212ENST00000463343 HOXC9P31274 260 aa24.22■■□□□ 1.47
SF1-212ENST00000463343 PTF1AQ7RTS3 328 aa24.22■■□□□ 1.47
SF1-212ENST00000463343 NSD2O96028 1365 aa24.21■■□□□ 1.47
SF1-212ENST00000463343 DCAF8L1A6NGE4 600 aa24.2■■□□□ 1.46
SF1-212ENST00000463343 TNNT2P45379 298 aaPredicted RBP24.2■■□□□ 1.46
SF1-212ENST00000463343 MORC1Q86VD1 984 aa24.2■■□□□ 1.46
SF1-212ENST00000463343 ANKRD24Q8TF21 1146 aa24.2■■□□□ 1.46
SF1-212ENST00000463343 ANO8Q9HCE9 1232 aaPredicted RBP24.2■■□□□ 1.46
SF1-212ENST00000463343 LTN1O94822 1766 aa24.2■■□□□ 1.46
SF1-212ENST00000463343 EMILIN1Q9Y6C2 1016 aa24.19■■□□□ 1.46
SF1-212ENST00000463343 ERBB3P21860 1342 aa24.18■■□□□ 1.46
SF1-212ENST00000463343 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
SF1-212ENST00000463343 CASZ1Q86V15 1759 aa24.17■■□□□ 1.46
SF1-212ENST00000463343 TXNRD1Q16881 649 aa24.17■■□□□ 1.46
SF1-212ENST00000463343 LTV1Q96GA3 475 aaPredicted RBP24.17■■□□□ 1.46
SF1-212ENST00000463343 YY1P25490 414 aa24.16■■□□□ 1.46
SF1-212ENST00000463343 HSP90AB2PQ58FF8 381 aa24.16■■□□□ 1.46
SF1-212ENST00000463343 CC2D1BQ5T0F9 858 aaKnown RBP24.16■■□□□ 1.46
SF1-212ENST00000463343 TNS2Q63HR2 1409 aa24.16■■□□□ 1.46
SF1-212ENST00000463343 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
SF1-212ENST00000463343 NLRP2Q9NX02 1062 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms