RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 GGNBP2Q9H3C7 697 aa12.63□□□□□ -0.39
TRAPPC12-214ENST00000462983 FYB1O15117 783 aa12.62□□□□□ -0.39
TRAPPC12-214ENST00000462983 ARHGEF25Q86VW2 580 aa12.62□□□□□ -0.39
TRAPPC12-214ENST00000462983 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
TRAPPC12-214ENST00000462983 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 PANK3Q9H999 370 aa12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
TRAPPC12-214ENST00000462983 A0A0G2JS52 829 aa12.6□□□□□ -0.39
TRAPPC12-214ENST00000462983 FBLN1P23142 703 aa12.6□□□□□ -0.39
TRAPPC12-214ENST00000462983 MYT1Q01538 1121 aa12.6□□□□□ -0.39
TRAPPC12-214ENST00000462983 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-214ENST00000462983 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
TRAPPC12-214ENST00000462983 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-214ENST00000462983 WNK3Q9BYP7 1800 aa12.59□□□□□ -0.39
TRAPPC12-214ENST00000462983 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
TRAPPC12-214ENST00000462983 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
TRAPPC12-214ENST00000462983 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
TRAPPC12-214ENST00000462983 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
TRAPPC12-214ENST00000462983 ABCC6O95255 1503 aa12.57□□□□□ -0.4
TRAPPC12-214ENST00000462983 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
TRAPPC12-214ENST00000462983 KAT6BQ8WYB5 2073 aa12.57□□□□□ -0.4
TRAPPC12-214ENST00000462983 CRB1P82279 1406 aa12.56□□□□□ -0.4
TRAPPC12-214ENST00000462983 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-214ENST00000462983 RRS1Q15050 365 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-214ENST00000462983 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
TRAPPC12-214ENST00000462983 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
TRAPPC12-214ENST00000462983 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
TRAPPC12-214ENST00000462983 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-214ENST00000462983 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
TRAPPC12-214ENST00000462983 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
TRAPPC12-214ENST00000462983 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-214ENST00000462983 EP400Q96L91 3159 aa12.54□□□□□ -0.4
TRAPPC12-214ENST00000462983 AMPHP49418 695 aa12.54□□□□□ -0.4
TRAPPC12-214ENST00000462983 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-214ENST00000462983 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-214ENST00000462983 HOXC9P31274 260 aa12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 ANKRD24Q8TF21 1146 aa12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 IP6K1Q92551 441 aa12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 KNSTRNQ9Y448 316 aa12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
TRAPPC12-214ENST00000462983 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
TRAPPC12-214ENST00000462983 KRT27Q7Z3Y8 459 aa12.52□□□□□ -0.41
TRAPPC12-214ENST00000462983 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC12-214ENST00000462983 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.41
TRAPPC12-214ENST00000462983 ERBB3P21860 1342 aa12.52□□□□□ -0.41
TRAPPC12-214ENST00000462983 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-214ENST00000462983 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
TRAPPC12-214ENST00000462983 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-214ENST00000462983 FAM182BQ5T319 152 aa12.51□□□□□ -0.41
TRAPPC12-214ENST00000462983 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-214ENST00000462983 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
TRAPPC12-214ENST00000462983 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-214ENST00000462983 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
TRAPPC12-214ENST00000462983 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
TRAPPC12-214ENST00000462983 NSD2O96028 1365 aa12.49□□□□□ -0.41
TRAPPC12-214ENST00000462983 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-214ENST00000462983 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
TRAPPC12-214ENST00000462983 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
TRAPPC12-214ENST00000462983 FLT4P35916 1363 aa12.48□□□□□ -0.41
TRAPPC12-214ENST00000462983 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
TRAPPC12-214ENST00000462983 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
TRAPPC12-214ENST00000462983 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
TRAPPC12-214ENST00000462983 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
TRAPPC12-214ENST00000462983 SMG6Q86US8 1419 aaKnown RBP12.46□□□□□ -0.41
TRAPPC12-214ENST00000462983 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
TRAPPC12-214ENST00000462983 DDB1Q16531 1140 aa12.46□□□□□ -0.41
TRAPPC12-214ENST00000462983 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 INSRP06213 1382 aa12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 TNS1Q9HBL0 1735 aaKnown RBP12.45□□□□□ -0.42
TRAPPC12-214ENST00000462983 IL2RBP14784 551 aa12.44□□□□□ -0.42
TRAPPC12-214ENST00000462983 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
TRAPPC12-214ENST00000462983 DIEXFQ68CQ4 756 aaKnown RBP12.44□□□□□ -0.42
TRAPPC12-214ENST00000462983 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
TRAPPC12-214ENST00000462983 SHANK3Q9BYB0 1731 aa12.43□□□□□ -0.42
TRAPPC12-214ENST00000462983 EXOC5O00471 708 aa12.43□□□□□ -0.42
TRAPPC12-214ENST00000462983 FAM196AQ6ZSG2 479 aa12.42□□□□□ -0.42
TRAPPC12-214ENST00000462983 TNS2Q63HR2 1409 aa12.42□□□□□ -0.42
TRAPPC12-214ENST00000462983 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 TRIM37O94972 964 aa12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 MEGF6O75095 1541 aa12.41□□□□□ -0.42
TRAPPC12-214ENST00000462983 EIF4A2Q14240 407 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-214ENST00000462983 DEFB132Q7Z7B7 95 aa12.4□□□□□ -0.42
TRAPPC12-214ENST00000462983 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
TRAPPC12-214ENST00000462983 EYA1Q99502 592 aa12.39□□□□□ -0.43
TRAPPC12-214ENST00000462983 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
TRAPPC12-214ENST00000462983 MTHFSP49914 203 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms