RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 FMN2Q9NZ56 1722 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
RPA3-205ENST00000462723 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
RPA3-205ENST00000462723 PROSER2Q86WR7 435 aaPredicted RBP11.08□□□□□ -0.64
RPA3-205ENST00000462723 IFNLR1Q8IU57 520 aaPredicted RBP11.08□□□□□ -0.64
RPA3-205ENST00000462723 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
RPA3-205ENST00000462723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPA3-205ENST00000462723 ANKARQ7Z5J8 1434 aa11.08□□□□□ -0.64
RPA3-205ENST00000462723 PRR36Q9H6K5 1346 aa11.08□□□□□ -0.64
RPA3-205ENST00000462723 NSD2O96028 1365 aa11.07□□□□□ -0.64
RPA3-205ENST00000462723 NLRP13Q86W25 1043 aa11.07□□□□□ -0.64
RPA3-205ENST00000462723 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
RPA3-205ENST00000462723 AKAP12Q02952 1782 aa11.06□□□□□ -0.64
RPA3-205ENST00000462723 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
RPA3-205ENST00000462723 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
RPA3-205ENST00000462723 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
RPA3-205ENST00000462723 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
RPA3-205ENST00000462723 PLEKHG3A1L390 1219 aa11.05□□□□□ -0.64
RPA3-205ENST00000462723 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
RPA3-205ENST00000462723 MON2Q7Z3U7 1717 aa11.05□□□□□ -0.64
RPA3-205ENST00000462723 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
RPA3-205ENST00000462723 RGPD8O14715 1765 aaPredicted RBP11.05□□□□□ -0.64
RPA3-205ENST00000462723 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
RPA3-205ENST00000462723 EDC4Q6P2E9 1401 aaKnown RBP11.04□□□□□ -0.64
RPA3-205ENST00000462723 MORC1Q86VD1 984 aa11.04□□□□□ -0.64
RPA3-205ENST00000462723 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
RPA3-205ENST00000462723 ANKRD26Q9UPS8 1709 aa11.04□□□□□ -0.64
RPA3-205ENST00000462723 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
RPA3-205ENST00000462723 PPP2R1AP30153 589 aa11.03□□□□□ -0.64
RPA3-205ENST00000462723 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
RPA3-205ENST00000462723 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
RPA3-205ENST00000462723 ACEP12821 1306 aa11.03□□□□□ -0.64
RPA3-205ENST00000462723 ERBB3P21860 1342 aa11.03□□□□□ -0.64
RPA3-205ENST00000462723 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
RPA3-205ENST00000462723 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.65
RPA3-205ENST00000462723 NGDNQ8NEJ9 315 aaKnown RBP11.02□□□□□ -0.65
RPA3-205ENST00000462723 FYB1O15117 783 aa11.01□□□□□ -0.65
RPA3-205ENST00000462723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.01□□□□□ -0.65
RPA3-205ENST00000462723 POLR3AO14802 1390 aaPredicted RBP11.01□□□□□ -0.65
RPA3-205ENST00000462723 DCCP43146 1447 aa11.01□□□□□ -0.65
RPA3-205ENST00000462723 ATF3P18847 181 aa11□□□□□ -0.65
RPA3-205ENST00000462723 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
RPA3-205ENST00000462723 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
RPA3-205ENST00000462723 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
RPA3-205ENST00000462723 PMFBP1Q8TBY8 1022 aa11□□□□□ -0.65
RPA3-205ENST00000462723 SPOCK2Q92563 424 aa11□□□□□ -0.65
RPA3-205ENST00000462723 GGNBP2Q9H3C7 697 aa11□□□□□ -0.65
RPA3-205ENST00000462723 ZNF335Q9H4Z2 1342 aaPredicted RBP11□□□□□ -0.65
RPA3-205ENST00000462723 USP6P35125 1406 aa11□□□□□ -0.65
RPA3-205ENST00000462723 NRKQ7Z2Y5 1582 aa10.99□□□□□ -0.65
RPA3-205ENST00000462723 CENPBP07199 599 aaPredicted RBP10.99□□□□□ -0.65
RPA3-205ENST00000462723 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
RPA3-205ENST00000462723 PNISRQ8TF01 805 aaKnown RBP10.99□□□□□ -0.65
RPA3-205ENST00000462723 PHF8Q9UPP1 1060 aa10.99□□□□□ -0.65
RPA3-205ENST00000462723 MSH6P52701 1360 aa10.99□□□□□ -0.65
RPA3-205ENST00000462723 XIRP1Q702N8 1843 aaKnown RBP10.98□□□□□ -0.65
RPA3-205ENST00000462723 TNNT2P45379 298 aaPredicted RBP10.98□□□□□ -0.65
RPA3-205ENST00000462723 ESCO1Q5FWF5 840 aa10.98□□□□□ -0.65
RPA3-205ENST00000462723 CADPS2Q86UW7 1296 aa10.98□□□□□ -0.65
RPA3-205ENST00000462723 TTC21BQ7Z4L5 1316 aa10.98□□□□□ -0.65
RPA3-205ENST00000462723 TTC21AQ8NDW8 1320 aa10.98□□□□□ -0.65
RPA3-205ENST00000462723 LRRC7Q96NW7 1537 aa10.98□□□□□ -0.65
RPA3-205ENST00000462723 NME9Q86XW9 330 aa10.97□□□□□ -0.65
RPA3-205ENST00000462723 COG3Q96JB2 828 aa10.97□□□□□ -0.65
RPA3-205ENST00000462723 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
RPA3-205ENST00000462723 C1orf167Q5SNV9 1468 aa10.96□□□□□ -0.65
RPA3-205ENST00000462723 SSH2Q76I76 1423 aa10.96□□□□□ -0.65
RPA3-205ENST00000462723 CFAP53Q96M91 514 aa10.96□□□□□ -0.65
RPA3-205ENST00000462723 MST1RQ04912 1400 aa10.95□□□□□ -0.66
RPA3-205ENST00000462723 PSEN1P49768 467 aa10.95□□□□□ -0.66
RPA3-205ENST00000462723 PSME1Q06323 249 aa10.95□□□□□ -0.66
RPA3-205ENST00000462723 DOK7Q18PE1 504 aa10.95□□□□□ -0.66
RPA3-205ENST00000462723 MTHFSP49914 203 aa10.94□□□□□ -0.66
RPA3-205ENST00000462723 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPA3-205ENST00000462723 WDR43Q15061 677 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPA3-205ENST00000462723 G3V3G9 751 aa10.93□□□□□ -0.66
RPA3-205ENST00000462723 ORAI2Q96SN7 254 aa10.93□□□□□ -0.66
RPA3-205ENST00000462723 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
RPA3-205ENST00000462723 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
RPA3-205ENST00000462723 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
RPA3-205ENST00000462723 INSRP06213 1382 aa10.92□□□□□ -0.66
RPA3-205ENST00000462723 USP31Q70CQ4 1352 aa10.92□□□□□ -0.66
RPA3-205ENST00000462723 PIK3C2AO00443 1686 aa10.92□□□□□ -0.66
RPA3-205ENST00000462723 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
RPA3-205ENST00000462723 MAP2P11137 1827 aaKnown RBP10.92□□□□□ -0.66
RPA3-205ENST00000462723 AATKQ6ZMQ8 1374 aa10.91□□□□□ -0.66
RPA3-205ENST00000462723 FOXO3O43524 673 aa10.91□□□□□ -0.66
RPA3-205ENST00000462723 USP54Q70EL1 1684 aa10.91□□□□□ -0.66
RPA3-205ENST00000462723 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
RPA3-205ENST00000462723 NLRP6P59044 892 aa10.9□□□□□ -0.66
RPA3-205ENST00000462723 GSE1Q14687 1217 aa10.9□□□□□ -0.66
RPA3-205ENST00000462723 ABTB2Q8N961 1025 aa10.9□□□□□ -0.66
RPA3-205ENST00000462723 SHPRHQ149N8 1683 aa10.89□□□□□ -0.67
RPA3-205ENST00000462723 KRT28Q7Z3Y7 464 aa10.89□□□□□ -0.67
RPA3-205ENST00000462723 SLAIN2Q9P270 581 aa10.89□□□□□ -0.67
RPA3-205ENST00000462723 POLKQ9UBT6 870 aa10.89□□□□□ -0.67
RPA3-205ENST00000462723 ADAMTS8Q9UP79 889 aa10.89□□□□□ -0.67
RPA3-205ENST00000462723 BLMP54132 1417 aaPredicted RBP10.89□□□□□ -0.67
RPA3-205ENST00000462723 SMG6Q86US8 1419 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms