RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ABCC6O95255 1503 aa14.2□□□□□ -0.14
RTF1-202ENST00000462276 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
RTF1-202ENST00000462276 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
RTF1-202ENST00000462276 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
RTF1-202ENST00000462276 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
RTF1-202ENST00000462276 FAM9BQ8IZU0 186 aa14.2□□□□□ -0.14
RTF1-202ENST00000462276 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
RTF1-202ENST00000462276 PHLPP1O60346 1717 aa14.19□□□□□ -0.14
RTF1-202ENST00000462276 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
RTF1-202ENST00000462276 ZBTB7CA1YPR0 619 aa14.18□□□□□ -0.14
RTF1-202ENST00000462276 FAM83GA6ND36 823 aa14.18□□□□□ -0.14
RTF1-202ENST00000462276 U2SURPO15042 1029 aaKnown RBP14.18□□□□□ -0.14
RTF1-202ENST00000462276 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
RTF1-202ENST00000462276 COL22A1Q8NFW1 1626 aaPredicted RBP14.17□□□□□ -0.14
RTF1-202ENST00000462276 NEFMP07197 916 aa14.17□□□□□ -0.14
RTF1-202ENST00000462276 ANKRD24Q8TF21 1146 aa14.17□□□□□ -0.14
RTF1-202ENST00000462276 AXIN2Q9Y2T1 843 aa14.17□□□□□ -0.14
RTF1-202ENST00000462276 ERBB3P21860 1342 aa14.16□□□□□ -0.14
RTF1-202ENST00000462276 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
RTF1-202ENST00000462276 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
RTF1-202ENST00000462276 RGS17Q9UGC6 210 aaPredicted RBP14.16□□□□□ -0.14
RTF1-202ENST00000462276 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.14
RTF1-202ENST00000462276 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
RTF1-202ENST00000462276 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
RTF1-202ENST00000462276 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
RTF1-202ENST00000462276 EVA1CP58658 441 aa14.15□□□□□ -0.14
RTF1-202ENST00000462276 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
RTF1-202ENST00000462276 RUNDC1Q96C34 613 aa14.15□□□□□ -0.14
RTF1-202ENST00000462276 EYA1Q99502 592 aa14.15□□□□□ -0.14
RTF1-202ENST00000462276 MARF1Q9Y4F3 1742 aaKnown RBP14.15□□□□□ -0.14
RTF1-202ENST00000462276 ADAMTS2O95450 1211 aa14.14□□□□□ -0.15
RTF1-202ENST00000462276 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
RTF1-202ENST00000462276 LTV1Q96GA3 475 aaPredicted RBP14.14□□□□□ -0.15
RTF1-202ENST00000462276 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
RTF1-202ENST00000462276 KDRP35968 1356 aa14.13□□□□□ -0.15
RTF1-202ENST00000462276 PLEKHG2Q9H7P9 1386 aa14.13□□□□□ -0.15
RTF1-202ENST00000462276 SULT6B1Q6IMI4 303 aa14.13□□□□□ -0.15
RTF1-202ENST00000462276 NBPF6Q5VWK0 638 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 FNBP4Q8N3X1 1017 aaPredicted RBP14.12□□□□□ -0.15
RTF1-202ENST00000462276 NBPF4Q96M43 638 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 NLRP2Q9NX02 1062 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 BTG4Q9NY30 223 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 MAP2P11137 1827 aaKnown RBP14.12□□□□□ -0.15
RTF1-202ENST00000462276 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
RTF1-202ENST00000462276 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
RTF1-202ENST00000462276 NGLY1Q96IV0 654 aa14.11□□□□□ -0.15
RTF1-202ENST00000462276 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
RTF1-202ENST00000462276 PRKAR2BP31323 418 aa14.1□□□□□ -0.15
RTF1-202ENST00000462276 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
RTF1-202ENST00000462276 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
RTF1-202ENST00000462276 CRYBG1Q9Y4K1 1723 aa14.1□□□□□ -0.15
RTF1-202ENST00000462276 HMOX1P09601 288 aa14.09□□□□□ -0.15
RTF1-202ENST00000462276 TOM1L2Q6ZVM7 507 aa14.09□□□□□ -0.15
RTF1-202ENST00000462276 UNC5CLQ8IV45 518 aa14.09□□□□□ -0.15
RTF1-202ENST00000462276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.09□□□□□ -0.153e-8■■□□□ 12.2
RTF1-202ENST00000462276 NCAPD2Q15021 1401 aa14.08□□□□□ -0.15
RTF1-202ENST00000462276 CAMTA1Q9Y6Y1 1673 aa14.08□□□□□ -0.16
RTF1-202ENST00000462276 COL5A2P05997 1499 aaPredicted RBP14.08□□□□□ -0.16
RTF1-202ENST00000462276 HNRNPUQ00839 825 aaKnown RBP eCLIP14.08□□□□□ -0.16
RTF1-202ENST00000462276 AMOTQ4VCS5 1084 aa14.08□□□□□ -0.16
RTF1-202ENST00000462276 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
RTF1-202ENST00000462276 STRN4Q9NRL3 753 aa14.08□□□□□ -0.16
RTF1-202ENST00000462276 THRAP3Q9Y2W1 955 aaKnown RBP14.08□□□□□ -0.16
RTF1-202ENST00000462276 APAF1O14727 1248 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 CCDC27Q2M243 656 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 LARP1Q6PKG0 1096 aaKnown RBP14.07□□□□□ -0.16
RTF1-202ENST00000462276 AEBP1Q8IUX7 1158 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 GAS2L2Q8NHY3 880 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
RTF1-202ENST00000462276 CRB1P82279 1406 aa14.07□□□□□ -0.16
RTF1-202ENST00000462276 SLIT2O94813 1529 aa14.06□□□□□ -0.16
RTF1-202ENST00000462276 LMOD3Q0VAK6 560 aa14.06□□□□□ -0.16
RTF1-202ENST00000462276 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
RTF1-202ENST00000462276 CCDC146Q8IYE0 955 aa14.06□□□□□ -0.16
RTF1-202ENST00000462276 COL18A1P39060 1754 aa14.06□□□□□ -0.16
RTF1-202ENST00000462276 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
RTF1-202ENST00000462276 TATP17735 454 aaPredicted RBP14.05□□□□□ -0.16
RTF1-202ENST00000462276 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
RTF1-202ENST00000462276 VPS72Q15906 364 aa14.05□□□□□ -0.16
RTF1-202ENST00000462276 NFE2L2Q16236 605 aa14.05□□□□□ -0.16
RTF1-202ENST00000462276 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
RTF1-202ENST00000462276 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
RTF1-202ENST00000462276 USP21Q9UK80 565 aa14.04□□□□□ -0.16
RTF1-202ENST00000462276 SPG7Q9UQ90 795 aa14.04□□□□□ -0.16
RTF1-202ENST00000462276 ZBED9Q6R2W3 1325 aa14.04□□□□□ -0.16
RTF1-202ENST00000462276 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
RTF1-202ENST00000462276 LTN1O94822 1766 aa14.04□□□□□ -0.16
RTF1-202ENST00000462276 IL2RBP14784 551 aa14.03□□□□□ -0.16
RTF1-202ENST00000462276 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
RTF1-202ENST00000462276 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
RTF1-202ENST00000462276 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
RTF1-202ENST00000462276 SPATA31A5Q5VU36 1347 aa14.03□□□□□ -0.16
RTF1-202ENST00000462276 SPATA31A7Q8IWB4 1347 aa14.03□□□□□ -0.16
RTF1-202ENST00000462276 LRP6O75581 1613 aa14.02□□□□□ -0.16
RTF1-202ENST00000462276 SPATA31A1Q5TZJ5 1347 aa14.02□□□□□ -0.17
RTF1-202ENST00000462276 RIPK4P57078 832 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 722.5 ms