RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TERF2IPQ9NYB0 399 aa14.31□□□□□ -0.12
SF3A3-204ENST00000462258 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
SF3A3-204ENST00000462258 OVOS2A0A0J9YW53 1432 aa14.31□□□□□ -0.12
SF3A3-204ENST00000462258 OVOS2Q6IE36 1432 aa14.31□□□□□ -0.12
SF3A3-204ENST00000462258 SOX12O15370 315 aa14.3□□□□□ -0.12
SF3A3-204ENST00000462258 USP35Q9P2H5 1018 aa14.3□□□□□ -0.12
SF3A3-204ENST00000462258 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
SF3A3-204ENST00000462258 TMF1P82094 1093 aa14.28□□□□□ -0.12
SF3A3-204ENST00000462258 BARGINQ6ZT62 677 aa14.28□□□□□ -0.12
SF3A3-204ENST00000462258 NME9Q86XW9 330 aa14.28□□□□□ -0.12
SF3A3-204ENST00000462258 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
SF3A3-204ENST00000462258 FAM208AQ9UK61 1670 aaKnown RBP14.27□□□□□ -0.12
SF3A3-204ENST00000462258 ARHGEF25Q86VW2 580 aa14.27□□□□□ -0.13
SF3A3-204ENST00000462258 TCP11L2Q8N4U5 519 aa14.27□□□□□ -0.13
SF3A3-204ENST00000462258 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
SF3A3-204ENST00000462258 WDR17Q8IZU2 1322 aa14.26□□□□□ -0.13
SF3A3-204ENST00000462258 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
SF3A3-204ENST00000462258 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
SF3A3-204ENST00000462258 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
SF3A3-204ENST00000462258 FAM182BQ5T319 152 aa14.25□□□□□ -0.13
SF3A3-204ENST00000462258 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
SF3A3-204ENST00000462258 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
SF3A3-204ENST00000462258 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
SF3A3-204ENST00000462258 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
SF3A3-204ENST00000462258 DISP2A7MBM2 1401 aa14.23□□□□□ -0.13
SF3A3-204ENST00000462258 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
SF3A3-204ENST00000462258 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
SF3A3-204ENST00000462258 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
SF3A3-204ENST00000462258 RREB1Q92766 1687 aa14.22□□□□□ -0.13
SF3A3-204ENST00000462258 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
SF3A3-204ENST00000462258 BAG6P46379 1132 aa14.21□□□□□ -0.13
SF3A3-204ENST00000462258 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
SF3A3-204ENST00000462258 ERBB3P21860 1342 aa14.2□□□□□ -0.14
SF3A3-204ENST00000462258 RGPD3A6NKT7 1758 aaPredicted RBP14.2□□□□□ -0.14
SF3A3-204ENST00000462258 RGPD4Q7Z3J3 1758 aa14.2□□□□□ -0.14
SF3A3-204ENST00000462258 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
SF3A3-204ENST00000462258 NUP188Q5SRE5 1749 aa14.19□□□□□ -0.14
SF3A3-204ENST00000462258 ANKRD26Q9UPS8 1709 aa14.19□□□□□ -0.14
SF3A3-204ENST00000462258 TNS2Q63HR2 1409 aa14.19□□□□□ -0.14
SF3A3-204ENST00000462258 COG3Q96JB2 828 aa14.19□□□□□ -0.14
SF3A3-204ENST00000462258 NSD3Q9BZ95 1437 aa14.18□□□□□ -0.14
SF3A3-204ENST00000462258 CARD10Q9BWT7 1032 aa14.18□□□□□ -0.14
SF3A3-204ENST00000462258 RGPD2P0DJD1 1756 aa14.18□□□□□ -0.14
SF3A3-204ENST00000462258 DDB1Q16531 1140 aa14.17□□□□□ -0.14
SF3A3-204ENST00000462258 CDCA7Q9BWT1 371 aaPredicted RBP14.17□□□□□ -0.14
SF3A3-204ENST00000462258 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
SF3A3-204ENST00000462258 TRIM37O94972 964 aa14.16□□□□□ -0.14
SF3A3-204ENST00000462258 NHSQ6T4R5 1651 aa14.16□□□□□ -0.14
SF3A3-204ENST00000462258 PARD3Q8TEW0 1356 aa14.15□□□□□ -0.14
SF3A3-204ENST00000462258 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.14
SF3A3-204ENST00000462258 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
SF3A3-204ENST00000462258 ANKRD24Q8TF21 1146 aa14.15□□□□□ -0.14
SF3A3-204ENST00000462258 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
SF3A3-204ENST00000462258 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
SF3A3-204ENST00000462258 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
SF3A3-204ENST00000462258 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
SF3A3-204ENST00000462258 SHANK3Q9BYB0 1731 aa14.13□□□□□ -0.15
SF3A3-204ENST00000462258 LRP5O75197 1615 aa14.13□□□□□ -0.15
SF3A3-204ENST00000462258 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
SF3A3-204ENST00000462258 FYB1O15117 783 aa14.13□□□□□ -0.15
SF3A3-204ENST00000462258 IP6K1Q92551 441 aa14.13□□□□□ -0.15
SF3A3-204ENST00000462258 BCL9O00512 1426 aa14.13□□□□□ -0.15
SF3A3-204ENST00000462258 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
SF3A3-204ENST00000462258 APBA3O96018 575 aa14.12□□□□□ -0.15
SF3A3-204ENST00000462258 HOXC9P31274 260 aa14.12□□□□□ -0.15
SF3A3-204ENST00000462258 POLR3GLQ9BT43 218 aa14.12□□□□□ -0.15
SF3A3-204ENST00000462258 AMPHP49418 695 aa14.11□□□□□ -0.15
SF3A3-204ENST00000462258 EZH2Q15910 746 aaKnown RBP14.11□□□□□ -0.15
SF3A3-204ENST00000462258 SMG6Q86US8 1419 aaKnown RBP14.11□□□□□ -0.15
SF3A3-204ENST00000462258 IL2RBP14784 551 aa14.1□□□□□ -0.15
SF3A3-204ENST00000462258 FBLN1P23142 703 aa14.1□□□□□ -0.15
SF3A3-204ENST00000462258 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
SF3A3-204ENST00000462258 MARCH10Q8NA82 808 aaPredicted RBP14.1□□□□□ -0.15
SF3A3-204ENST00000462258 LTV1Q96GA3 475 aaPredicted RBP14.1□□□□□ -0.15
SF3A3-204ENST00000462258 CARD14Q9BXL6 1004 aa14.1□□□□□ -0.15
SF3A3-204ENST00000462258 DOT1LQ8TEK3 1739 aa14.1□□□□□ -0.15
SF3A3-204ENST00000462258 FLT4P35916 1363 aa14.09□□□□□ -0.15
SF3A3-204ENST00000462258 MAP2P11137 1827 aaKnown RBP14.09□□□□□ -0.15
SF3A3-204ENST00000462258 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
SF3A3-204ENST00000462258 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
SF3A3-204ENST00000462258 BTAF1O14981 1849 aa14.08□□□□□ -0.15
SF3A3-204ENST00000462258 EXOC5O00471 708 aa14.08□□□□□ -0.16
SF3A3-204ENST00000462258 MEGF6O75095 1541 aa14.08□□□□□ -0.16
SF3A3-204ENST00000462258 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.16
SF3A3-204ENST00000462258 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
SF3A3-204ENST00000462258 INSRP06213 1382 aa14.06□□□□□ -0.16
SF3A3-204ENST00000462258 PKD1L3Q7Z443 1732 aa14.05□□□□□ -0.16
SF3A3-204ENST00000462258 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
SF3A3-204ENST00000462258 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
SF3A3-204ENST00000462258 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
SF3A3-204ENST00000462258 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
SF3A3-204ENST00000462258 NSD2O96028 1365 aa14.03□□□□□ -0.16
SF3A3-204ENST00000462258 KAT6BQ8WYB5 2073 aa14.02□□□□□ -0.16
SF3A3-204ENST00000462258 PAPPAQ13219 1627 aa14.02□□□□□ -0.16
SF3A3-204ENST00000462258 PLSCR1O15162 318 aa14.02□□□□□ -0.17
SF3A3-204ENST00000462258 HSP90AB2PQ58FF8 381 aa14.02□□□□□ -0.17
SF3A3-204ENST00000462258 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
SF3A3-204ENST00000462258 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
SF3A3-204ENST00000462258 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
SF3A3-204ENST00000462258 USHBP1Q8N6Y0 703 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms