RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 CSB-PGBD3P0DP91 1061 aa24.96■■□□□ 1.59
COL1A2-202ENST00000461525 NME9Q86XW9 330 aa24.96■■□□□ 1.59
COL1A2-202ENST00000461525 NFAT5O94916 1531 aa24.96■■□□□ 1.59
COL1A2-202ENST00000461525 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.59
COL1A2-202ENST00000461525 APBA3O96018 575 aa24.95■■□□□ 1.58
COL1A2-202ENST00000461525 TESK2Q96S53 571 aa24.95■■□□□ 1.58
COL1A2-202ENST00000461525 PSDA5PKW4 1024 aaPredicted RBP24.94■■□□□ 1.58
COL1A2-202ENST00000461525 EZH2Q15910 746 aaKnown RBP24.94■■□□□ 1.58
COL1A2-202ENST00000461525 COL18A1P39060 1754 aa24.94■■□□□ 1.58
COL1A2-202ENST00000461525 TNS1Q9HBL0 1735 aaKnown RBP24.94■■□□□ 1.58
COL1A2-202ENST00000461525 EDC4Q6P2E9 1401 aaKnown RBP24.94■■□□□ 1.58
COL1A2-202ENST00000461525 A0A1W2PP64 1363 aa24.93■■□□□ 1.58
COL1A2-202ENST00000461525 C11orf95C9JLR9 678 aaPredicted RBP24.93■■□□□ 1.58
COL1A2-202ENST00000461525 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
COL1A2-202ENST00000461525 DDB1Q16531 1140 aa24.92■■□□□ 1.58
COL1A2-202ENST00000461525 CAMKK2Q96RR4 588 aa24.92■■□□□ 1.58
COL1A2-202ENST00000461525 PARP4Q9UKK3 1724 aaKnown RBP24.92■■□□□ 1.58
COL1A2-202ENST00000461525 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
COL1A2-202ENST00000461525 CDCA7Q9BWT1 371 aaPredicted RBP24.91■■□□□ 1.58
COL1A2-202ENST00000461525 CARD10Q9BWT7 1032 aa24.91■■□□□ 1.58
COL1A2-202ENST00000461525 NINLQ9Y2I6 1382 aa24.91■■□□□ 1.58
COL1A2-202ENST00000461525 OVOS2A0A0G2JMS6 1433 aa24.9■■□□□ 1.58
COL1A2-202ENST00000461525 OVOS2A0A0J9YW53 1432 aa24.9■■□□□ 1.58
COL1A2-202ENST00000461525 OVOS2Q6IE36 1432 aa24.9■■□□□ 1.58
COL1A2-202ENST00000461525 ABCC6O95255 1503 aa24.9■■□□□ 1.58
COL1A2-202ENST00000461525 R3HDM1Q15032 1099 aaKnown RBP24.87■■□□□ 1.57
COL1A2-202ENST00000461525 LRRC37A3O60309 1634 aa24.86■■□□□ 1.57
COL1A2-202ENST00000461525 USP47Q96K76 1375 aa24.86■■□□□ 1.57
COL1A2-202ENST00000461525 CCDC7Q96M83 1385 aa24.86■■□□□ 1.57
COL1A2-202ENST00000461525 USP54Q70EL1 1684 aa24.85■■□□□ 1.57
COL1A2-202ENST00000461525 ERBB3P21860 1342 aa24.84■■□□□ 1.57
COL1A2-202ENST00000461525 TMF1P82094 1093 aa24.82■■□□□ 1.56
COL1A2-202ENST00000461525 MARCH10Q8NA82 808 aaPredicted RBP24.81■■□□□ 1.56
COL1A2-202ENST00000461525 NLRP2Q9NX02 1062 aa24.81■■□□□ 1.56
COL1A2-202ENST00000461525 EXOC5O00471 708 aa24.8■■□□□ 1.56
COL1A2-202ENST00000461525 PEAK1Q9H792 1746 aa24.8■■□□□ 1.56
COL1A2-202ENST00000461525 ANKRD36BQ8N2N9 1353 aa24.8■■□□□ 1.56
COL1A2-202ENST00000461525 LRP5O75197 1615 aa24.79■■□□□ 1.56
COL1A2-202ENST00000461525 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
COL1A2-202ENST00000461525 COG3Q96JB2 828 aa24.79■■□□□ 1.56
COL1A2-202ENST00000461525 TIMELESSQ9UNS1 1208 aa24.79■■□□□ 1.56
COL1A2-202ENST00000461525 NBPF14Q5TI25 921 aa24.78■■□□□ 1.56
COL1A2-202ENST00000461525 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
COL1A2-202ENST00000461525 BCL11BQ9C0K0 894 aaPredicted RBP24.78■■□□□ 1.56
COL1A2-202ENST00000461525 CLSPNQ9HAW4 1339 aa24.78■■□□□ 1.56
COL1A2-202ENST00000461525 BCL9O00512 1426 aa24.78■■□□□ 1.56
COL1A2-202ENST00000461525 RGPD5Q99666 1765 aa24.77■■□□□ 1.56
COL1A2-202ENST00000461525 WNK3Q9BYP7 1800 aa24.77■■□□□ 1.56
COL1A2-202ENST00000461525 TNS2Q63HR2 1409 aa24.77■■□□□ 1.56
COL1A2-202ENST00000461525 CDCA8Q53HL2 280 aa24.75■■□□□ 1.55
COL1A2-202ENST00000461525 IP6K1Q92551 441 aa24.75■■□□□ 1.55
COL1A2-202ENST00000461525 PLSCR1O15162 318 aa24.74■■□□□ 1.55
COL1A2-202ENST00000461525 RREB1Q92766 1687 aa24.74■■□□□ 1.55
COL1A2-202ENST00000461525 IL2RBP14784 551 aa24.73■■□□□ 1.55
COL1A2-202ENST00000461525 PTF1AQ7RTS3 328 aa24.73■■□□□ 1.55
COL1A2-202ENST00000461525 LTN1O94822 1766 aa24.72■■□□□ 1.55
COL1A2-202ENST00000461525 MAP3K19Q56UN5 1328 aa24.71■■□□□ 1.55
COL1A2-202ENST00000461525 NUP188Q5SRE5 1749 aa24.7■■□□□ 1.54
COL1A2-202ENST00000461525 LTV1Q96GA3 475 aaPredicted RBP24.7■■□□□ 1.54
COL1A2-202ENST00000461525 AMPHP49418 695 aa24.69■■□□□ 1.54
COL1A2-202ENST00000461525 FYB1O15117 783 aa24.67■■□□□ 1.54
COL1A2-202ENST00000461525 HOXC9P31274 260 aa24.67■■□□□ 1.54
COL1A2-202ENST00000461525 GGNBP2Q9H3C7 697 aa24.67■■□□□ 1.54
COL1A2-202ENST00000461525 FBLN1P23142 703 aa24.66■■□□□ 1.54
COL1A2-202ENST00000461525 SBF2Q86WG5 1849 aa24.65■■□□□ 1.54
COL1A2-202ENST00000461525 RGPD3A6NKT7 1758 aaPredicted RBP24.65■■□□□ 1.54
COL1A2-202ENST00000461525 RGPD4Q7Z3J3 1758 aa24.65■■□□□ 1.54
COL1A2-202ENST00000461525 KCNQ2O43526 872 aa24.64■■□□□ 1.54
COL1A2-202ENST00000461525 RTL1A6NKG5 1358 aa24.64■■□□□ 1.53
COL1A2-202ENST00000461525 RRS1Q15050 365 aaKnown RBP24.63■■□□□ 1.53
COL1A2-202ENST00000461525 ACSBG1Q96GR2 724 aa24.63■■□□□ 1.53
COL1A2-202ENST00000461525 ANO8Q9HCE9 1232 aaPredicted RBP24.63■■□□□ 1.53
COL1A2-202ENST00000461525 PROM2Q8N271 834 aa24.62■■□□□ 1.53
COL1A2-202ENST00000461525 TXNRD1Q16881 649 aa24.61■■□□□ 1.53
COL1A2-202ENST00000461525 CCER1Q8TC90 406 aaPredicted RBP24.58■■□□□ 1.53
COL1A2-202ENST00000461525 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.53
COL1A2-202ENST00000461525 SPON1Q9HCB6 807 aa24.58■■□□□ 1.53
COL1A2-202ENST00000461525 FAM208AQ9UK61 1670 aaKnown RBP24.58■■□□□ 1.53
COL1A2-202ENST00000461525 NSD3Q9BZ95 1437 aa24.58■■□□□ 1.53
COL1A2-202ENST00000461525 CARD14Q9BXL6 1004 aa24.57■■□□□ 1.52
COL1A2-202ENST00000461525 NHSQ6T4R5 1651 aa24.56■■□□□ 1.52
COL1A2-202ENST00000461525 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
COL1A2-202ENST00000461525 STK32BQ9NY57 414 aa24.56■■□□□ 1.52
COL1A2-202ENST00000461525 PPP1R1BQ9UD71 204 aaPredicted RBP24.53■■□□□ 1.52
COL1A2-202ENST00000461525 FLT4P35916 1363 aa24.53■■□□□ 1.52
COL1A2-202ENST00000461525 KIF24Q5T7B8 1368 aa24.53■■□□□ 1.52
COL1A2-202ENST00000461525 MYOM1P52179 1685 aa24.53■■□□□ 1.52
COL1A2-202ENST00000461525 NBPF6Q5VWK0 638 aa24.52■■□□□ 1.52
COL1A2-202ENST00000461525 ZCRB1Q8TBF4 217 aaKnown RBP24.52■■□□□ 1.52
COL1A2-202ENST00000461525 NBPF4Q96M43 638 aa24.52■■□□□ 1.52
COL1A2-202ENST00000461525 POLR3GLQ9BT43 218 aa24.52■■□□□ 1.52
COL1A2-202ENST00000461525 INSRP06213 1382 aa24.52■■□□□ 1.52
COL1A2-202ENST00000461525 MEGF6O75095 1541 aa24.51■■□□□ 1.51
COL1A2-202ENST00000461525 EIF4G2P78344 907 aaKnown RBP eCLIP24.51■■□□□ 1.51
COL1A2-202ENST00000461525 HSP90AB2PQ58FF8 381 aa24.51■■□□□ 1.51
COL1A2-202ENST00000461525 USHBP1Q8N6Y0 703 aa24.51■■□□□ 1.51
COL1A2-202ENST00000461525 SLC15A2Q16348 729 aa24.5■■□□□ 1.51
COL1A2-202ENST00000461525 KIF20BQ96Q89 1820 aa24.49■■□□□ 1.51
COL1A2-202ENST00000461525 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
COL1A2-202ENST00000461525 CGNL1Q0VF96 1302 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms